Supramolecular assemblies of a series of 2-arylbenzimidazoles at the air/water interface: in situ coordination, surface architecture and supramolecular chirality

The spreading behavior and supramolecular assemblies of some arylbenzimidazoles with 2-substituted aromatic groups such as phenyl, naphthyl, anthryl and pyrenyl on water surface and the subphase containing AgNO3 were investigated. It was observed that although these compounds lack long alkyl chains, they showed surface activity when spread from chloroform solution on water surface and formed the supramolecular assemblies. When AgNO3 was present in the subphase, a coordination between the imidazole group of the compounds and Ag(I) occurred in situ in the spreading film, which was verified by the surface pressure/area (pi-A) isotherms and UV/Vis absorption spectra. Both the spreading films from water and the aqueous AgNO3 subphase were transferred onto solid substrates and their surface morphologies as well as properties were characterized by AFM, UV/Vis absorption and CD spectra. Various surface morphologies such as nanoparticles, block domains and nanoutensils were observed depending on the substituted aromatic groups. Interestingly, although all of these compounds were achiral, supramolecular chirality was obtained for some of the arylbenzimidazole films assembled from either the water surface or the subphase containing AgNO3. It was revealed that chiral assemblies could be obtained from water surface for the benzimidazoles which have pyrenyl or alpha-naphthyl groups. For benzimidazole derivative with anthryl group, chiral assemblies could be obtained when spreading on the aqueous AgNO3 subphase. For the benzimidazoles with phenyl or beta-naphthyl groups, no chirality was obtained. It was suggested that both the overcrowded stacking of the aromatic groups and the cooperative arrangement of the molecules on water surface or aqueous AgNO3 subphase play a crucial role in forming the chiral supramolecular assemblies.     

Bioorthogonal chemistry:a covalent strategy for the study of biological systems

The development of genetically encoded,wavelength-tunable fluorescent proteins has provided a powerful imaging tool to the study of protein dynamics and functions in cellular and organismal biology.However,many biological functions are not directly encoded in the protein primary sequence,e.g.,dynamic regulation afforded by protein posttranslational modifications such as phosphorylation.To meet this challenge,an emerging field of bioorthogonal chemistry has promised to offer a versatile strategy to selective...     

An optimum strategy for solution chemistry using semiempirical molecular orbital method: Importance of description of charge distribution

For the purpose to execute direct dynamics calculation in solution chemistry, we propose an optimum strategy for solution chemistry using semiempirical molecular orbital (MO) method with neglect of diatomic differential overlap (NDDO) approximation with specific solution reaction parameters (SSRP), i.e., the NDDO‐SSRP method. In this strategy, the empirical parameters of the semi‐empirical MO method were optimized individually for target molecule or ion by reference to the ab initio MO calculation data for many configurations on the potential energy surface near the reaction path. For demonstration, the NDDO‐SSRP method was applied to two molecules and two ions (OH^?, H₂O, NH₃, NH₄⁺) at their equilibrium states in aqueous solution, respectively. Accordingly, it was verified that both the potential energy surface and the charge distribution of these solutes in aqueous solution are dramatically improved to reproduce themselves accurately at ab initio MO calculation level. In conclusion, it is expected that the NDDO‐SSRP method should become quite useful for dynamic and statistical applications to chemical reaction systems in solution. © 2009 Wiley Periodicals, Inc. J Comput Chem, 2010