Oligo(borolyl)benzenes—Synthesis and Properties

Herein, we report the synthesis of boroles that are linked by a conjugated phenylene spacer. The characterization of these compounds was completed by NMR and UV/Vis spectroscopy, as well as X‐ray crystal diffraction. Furthermore, the coordination behavior of these oligoboroles towards five electronically and sterically disparate pyridine derivatives was studied and revealed fundamental differences in the properties of the resulting adducts. The experimental results were supported by density functional theory (DFT) calculations that showed a charge‐transfer effect upon formation of the pyridine‐4‐carbonitrile adduct. By chemical reduction of a tris(borolyl)‐substituted benzene derivative, a hexaanion was isolated as a result of a two‐electron reduction of each borolyl moiety. The interaction of the borolyl units through the aryl spacer, and the possible increase of the Lewis acidity due to the conjugation of the borolyl moieties, were investigated by base transfer reactions.     

Role of adenine in thymine-dimer repair by reduced flavin-adenine dinucleotide

We present a study of excited-state behavior of reduced flavin cofactors using femtosecond optical transient absorption spectroscopy. The reduced flavin cofactors studied were in two protonation states: flavin-adenine dinucleotide (FADH2 and FADH-) and flavin-mononucleotide (FMNH2 and FMNH-). We find that FMNH- exhibits multiexponential decay dynamics due to the presence of two bent conformers of the isoalloxazine ring. FMNH2 exhibits an additional fast deactivation component that is assigned to an iminol tautomer. Reduced flavin cofactors also exhibit a long-lived component that is attributed to the semiquinone and the hydrated electron that are produced in photoinduced electron transfer to the solvent. The presence of adenine in FADH2 and FADH- further changes the excited-state dynamics due to intramolecular electron transfer from the isoalloxazine to the adenine moiety of cofactors. This electron transfer is more pronounced in FADH2 due to pi-stacking interactions between two moieties. We further studied cyclobutane thymine dimer (TT-dimer) repair via FADH- and FMNH- and found that the repair is much more efficient in the case of FADH-. These results suggest that the adenine moiety plays a significant role in the TT-dimer repair dynamics. Two possible explanations for the adenine mediation are presented: (i) a two-step electron transfer process, with the initial electron transfer occurring from flavin to adenine moiety of FADH-, followed by a second electron transfer from adenine to TT-dimer; (ii) the preconcentration of TT-dimer molecules around the flavin cofactor due to the hydrophobic nature of the adenine moiety.     

Photoinduced electron transfer in Langmuir-Blodgett monolayers of porphyrin-fullerene dyads

A series of electron donor-acceptor (DA) dyads, composed of a porphyrin donor and a fullerene acceptor covalently linked with two molecular chains, were used to fabricate solid molecular films with the Langmuir-Blodgett (LB) technique. By means of the LB technique, the DA molecules can be oriented perpendicular to the plane of the substrate. In DHD6ee and its zinc derivative hydrophilic groups are attached to the phenyl moieties in the porphyrin end of the molecule; while in the other three dyads, TBD6a, TBD6hp, and TBD4hp, the hydrophilic groups are in the fullerene end of the molecule. This makes it possible to alternate the orientation of the molecules in two opposite directions with respect to the air-water interface and to fabricate molecular assemblies in which the direction of the primary photoinduced vectorial electron transfer can be controlled both by the deposition direction of the LB monolayer and by the selection of the used DA molecule. This was proved by the time-resolved Maxwell displacement charge measurements. The spectroscopic properties of the DA films were studied with the steady-state absorption and fluorescence methods. In addition, the time correlated single photon counting technique was used to determine the fluorescence properties of the dyad films.     

Photocatalytic hydrogen evolution based on efficient energy and electron transfers in donor-bridge-acceptor multibranched-porphyrin-functionalized platinum nanocomposites

Two donor-bridge-acceptor conjugates (5,10,15,20-tetrakis[4-(N,N-diphenylaminobenzoate)phenyl] porphyrin (TPPZ) and 5,10,15,20-tetrakis[4-(N,N-diphenylaminostyryl)phenyl] porphyrin (TPPX)) were covalently linked to triphenylamine (TPA) at the meso-position of porphyrin ring. The triphenylamine entities were expected to act as energy donors and the porphyrins to act as an energy acceptor. In this paper, we report on the synthesis of these multibranched-porphyrin-functionalized Pt nanocomposites. The conjugates used here not only served as a stabilizer to prevent agglomeration of Pt nanoparticles, but also as a light-harvesting photosensitizer. The occurrence of photoinduced electron-transfer processes was confirmed by time-resolved fluorescence and photoelectrochemical spectral measurements. The different efficiencies for energy and electron transfer in the two multibranched porphyrins and the functionalized Pt nanocomposites were attributed to diverse covalent linkages. Moreover, in the reduction of water to produce H(2), the photocatalytic activity of the Pt nanocomposite functionalized by TPPX, in which the triphenylamine and porphyrin moieties are bonded through an ethylene bridge, was much higher than that of the platinum nanocomposite functionalized by TPPZ, in which the two moieties are bonded through an ester. This investigation demonstrates the fundamental advantages of constructing donor-bridge-acceptor conjugates as highly efficient photosensitizers based on efficient energy and electron transfer.     

Computational study of structure,electronic, and microscopic charge transport properties of small conjugated diketopyrrolopyrrole‐thiophene molecules

π‐Conjugated small molecules containing diketopyrrolopyrrole (DPP) and thiophene moieties represent a modern class of functional materials that exhibit promising charge transport properties and therefore have great potential as building blocks of active elements of electronic devices. As a starting point of this computational study, the molecular structure, electronic characteristics, and reorganization energies associated with electron or hole transfer are considered. Prediction of molecular crystal packing is followed by the calculation of couplings between adjacent molecules and detection of the effective charge transfer pathways. Finally, the rates of charge transfer process are evaluated. The obtained results shed light not only on the properties of materials containing low‐molecular species but also serve as a benchmark for further classical force‐field simulations of DPP‐based polymers.     

Photosynthetic Antenna–Reaction Center Mimicry by Using Boron Dipyrromethene Sensitizers

Various molecular and supramolecular systems have been synthesized and characterized recently to mimic the functions of photosynthesis, in which solar energy conversion is achieved. Artificial photosynthesis consists of light‐harvesting and charge‐separation processes together with catalytic units of water oxidation and reduction. Among the organic molecules, derivatives of BF₂‐chelated dipyrromethene (BODIPY), “porphyrin’s little sister”, have been widely used in constructing these artificial photosynthetic models due to their unique properties. In these photosynthetic models, BODIPYs act as not only excellent antenna molecules, but also as electron‐donor and ‐acceptor molecules in both the covalently linked molecular and supramolecular systems formed by axial coordination, hydrogen bonding, or crown ether complexation. The relationships between the structures and photochemical reactivities of these novel molecular and supramolecular systems are discussed in relation to the efficiency of charge separation and charge recombination. Femto‐ and nanosecond transient absorption and photoelectrochemical techniques have been employed in these studies to give clear evidence for the occurrence of energy‐ and electron‐transfer reactions and to determine their rates and efficiencies.     

Photocatalytic Hydrogen Evolution Based on Efficient Energy and Electron Transfers in Donor–Bridge–Acceptor Multibranched‐Porphyrin‐Functionalized Platinum Nanocomposites

Two donor–bridge–acceptor conjugates (5,10,15,20‐tetrakis[4‐(N,N‐diphenylaminobenzoate)phenyl] porphyrin (TPPZ) and 5,10,15,20‐tetrakis[4‐(N,N‐diphenylaminostyryl)phenyl] porphyrin (TPPX)) were covalently linked to triphenylamine (TPA) at the meso‐position of porphyrin ring. The triphenylamine entities were expected to act as energy donors and the porphyrins to act as an energy acceptor. In this paper, we report on the synthesis of these multibranched‐porphyrin‐functionalized Pt nanocomposites. The conjugates used here not only served as a stabilizer to prevent agglomeration of Pt nanoparticles, but also as a light‐harvesting photosensitizer. The occurrence of photoinduced electron‐transfer processes was confirmed by time‐resolved fluorescence and photoelectrochemical spectral measurements. The different efficiencies for energy and electron transfer in the two multibranched porphyrins and the functionalized Pt nanocomposites were attributed to diverse covalent linkages. Moreover, in the reduction of water to produce H₂, the photocatalytic activity of the Pt nanocomposite functionalized by TPPX, in which the triphenylamine and porphyrin moieties are bonded through an ethylene bridge, was much higher than that of the platinum nanocomposite functionalized by TPPZ, in which the two moieties are bonded through an ester. This investigation demonstrates the fundamental advantages of constructing donor–bridge–acceptor conjugates as highly efficient photosensitizers based on efficient energy and electron transfer.     

Novel fused D-A dyad and A-D-A triad incorporating tetrathiafulvalene and p-benzoquinone

Novel fused donor-acceptor dyad (TTF-Q or D-A) and acceptor-donor-acceptor triad (Q-TTF-Q or A-D-A) incorporating the donor tetrathiafulvalene (TTF) and the acceptor p-benzoquinone (Q) have been synthesized. The solution UV-vis spectra of these molecules display a low-energy absorption band that is attributed to an intramolecular charge transfer between both antagonistic units. The presence of reversible oxidation and reduction waves for the donor and acceptor moieties was shown by cyclic voltammetry, in agreement with the ratio TTF/quinone(s) units. The successive generation from these compounds of the cation radical and anion radical obtained upon (electro)chemical oxidation and reduction, respectively, was monitored by optical and ESR spectroscopies. The anion radical Q-TTF-Q(-.) triad was demonstrated to be a class II mixed-valence system with the existence of a temperature-dependent intramolecular electron transfer. The crystallographic tendency of these fused systems to overlap in mixed stacks of alternating A-D-A units is also discussed.     

Photoinduced energy and electron transfer processes in hexapyropheophorbide a- fullerene [C(60)] molecular systems

The photophysical properties of the novel hexapyropheophorbide a (P6), and hexakis (pyropheophorbide a)-C60 (FP6) were studied and compared with those of hexakis (pyropheophorbide a)-fullerene [5:1] hexaadduct (FHP6). It was found that after light absorption the pyropheophorbide a molecules in all three compounds undergo very efficient energy transfer as well as partly excitonic interactions. The last process results in the formation of energy traps, which could be resolved experimentally. For P6, due to shorter distances between neighboring dye molecules, stronger interactions between pyropheophorbide a units than for FHP6 were observed. As a consequence, the excitation energy is delivered rapidly to traps formed by stacked pyropheophorbide a molecules resulting in the reduction of fluorescence, intersystem crossing, and singlet oxygen quantum yields compared to the values of FHP6. For FP6 the reduction of these values is much stronger due to an additional fast and efficient deactivation process, namely photoinduced electron transfer from pyropheophorbide a to the fullerene moiety. Consequently, FP6 can be considered as a combination of a light-harvesting system consisting of several separate pyropheophorbide a molecules and a charge-separating center.     

Pendant unit effect on electron tunneling in U-shaped molecules

The electron transfer reactions of three U-shaped donor-bridge-acceptor molecules with different pendant groups have been studied in different solvents as a function of temperature. Analysis of the electron transfer kinetics in nonpolar and weakly polar solvents provides experimental reaction Gibbs energies that are used to parameterize a molecular solvation model. This solvation model is then used to predict energetic parameters in the electron transfer rate constant expression and allow the electronic coupling between the electron donor and electron acceptor groups to be determined from the rate data. The U-shaped molecules differ by alkylation of the aromatic pendant group, which lies in the ‘line-of-sight’ between the donor and acceptor groups. The findings show that the electronic coupling through the pendant group is similar for these molecules.     

Conformationally constrained macrocyclic diporphyrin-fullerene artificial photosynthetic reaction center

Photosynthetic reaction centers convert excitation energy from absorbed sunlight into chemical potential energy in the form of a charge-separated state. The rates of the electron transfer reactions necessary to achieve long-lived, high-energy charge-separated states with high quantum yields are determined in part by precise control of the electronic coupling among the chromophores, donors, and acceptors and of the reaction energetics. Successful artificial photosynthetic reaction centers for solar energy conversion have similar requirements. Control of electronic coupling in particular necessitates chemical linkages between active component moieties that both mediate coupling and restrict conformational mobility so that only spatial arrangements that promote favorable coupling are populated. Toward this end, we report the synthesis, structure, and photochemical properties of an artificial reaction center containing two porphyrin electron donor moieties and a fullerene electron acceptor in a macrocyclic arrangement involving a ring of 42 atoms. The two porphyrins are closely spaced, in an arrangement reminiscent of that of the special pair in bacterial reaction centers. The molecule is produced by an unusual cyclization reaction that yields mainly a product with C(2) symmetry and trans-2 disubstitution at the fullerene. The macrocycle maintains a rigid, highly constrained structure that was determined by UV-vis spectroscopy, NMR, mass spectrometry, and molecular modeling at the semiempirical PM6 and DFT (B3LYP/6-31G**) levels. Transient absorption results for the macrocycle in 2-methyltetrahydrofuran reveal photoinduced electron transfer from the porphyrin first excited singlet state to the fullerene to form a P(?+)-C(60)(?-)-P charge separated state with a time constant of 1.1 ps. Photoinduced electron transfer to the fullerene excited singlet state to form the same charge-separated state has a time constant of 15 ps. The charge-separated state is formed with a quantum yield of essentially unity and has a lifetime of 2.7 ns. The ultrafast charge separation coupled with charge recombination that is over 2000 times slower is consistent with a very rigid molecular structure having a small reorganization energy for electron transfer, relative to related porphyrin-fullerene molecules.     

Conformational gating of long distance electron transfer through wire-like bridges in donor-bridge-acceptor molecules

A series of five donor-bridge-acceptor (DBA) molecules in which the donor is tetracene, the acceptor is pyromellitimide, and the bridge molecules are oligo-p-phenylenevinylenes (OPV) of increasing length has been shown to undergo electron transfer (ET) by means of two mechanisms. When the bridge is short, strongly distance dependent superexchange dynamics dominates, whereas when the bridge is longer, bridge-assisted hopping dynamics prevails. The latter mechanism results in relatively soft distance dependence for ET in which the OPV oligomers act effectively as molecular wires. We now report studies on the critical influence that bridge dynamics have on electron transfer through these oligomers. The temperature dependence of the charge separation (CS) rates in all five molecules does not appear to obey the predictions of standard ET theories based upon the Condon approximation. All five molecules show behavior consistent with CS being "gated" by torsional motion between the tetracene donor and the first bridge phenyl ring. This is based on the near equivalence of the CS activation energies measured for all five molecules with the frequency of a known vibrational mode in 5-phenyltetracene. In the molecule containing a trans-stilbene bridge, a competition occurs between the tetracene-phenyl torsional motion and one that occurs between the vinyl group and the phenyls linked to it. This results in complex temperature-dependent CS that exhibits both activated and negatively activated regimes. The charge recombination (CR) reactions within the molecules which have the two shortest bridges, namely phenyl and trans-stilbene, show a weaker dependence on these molecular motions. The three molecules with the longest bridges all display complex temperature dependencies in both their rates of CS and CR, most likely because of the complex torsional motions, which arise from the multiple phenyl-vinyl linkages. The data show that long-distance electron transfer and therefore wire-like behavior within conjugated bridge molecules depend critically on these low-frequency torsional motions. Molecular device designs that utilize such bridges will need to address these issues.     

Electron-transfer oxidation properties of DNA bases and DNA oligomers

Kinetics for the thermal and photoinduced electron-transfer oxidation of a series of DNA bases with various oxidants having the known one-electron reduction potentials (E(red)) in an aqueous solution at 298 K were examined, and the resulting electron-transfer rate constants (k(et)) were evaluated in light of the free energy relationship of electron transfer to determine the one-electron oxidation potentials (E(ox)) of DNA bases and the intrinsic barrier of the electron transfer. Although the E(ox) value of GMP at pH 7 is the lowest (1.07 V vs SCE) among the four DNA bases, the highest E(ox) value (CMP) is only 0.19 V higher than that of GMP. The selective oxidation of GMP in the thermal electron-transfer oxidation of GMP results from a significant decrease in the pH dependent oxidation potential due to the deprotonation of GMP*+. The one-electron reduced species of the photosensitizer produced by photoinduced electron transfer are observed as the transient absorption spectra when the free energy change of electron transfer is negative. The rate constants of electron-transfer oxidation of the guanine moieties in DNA oligomers with Fe(bpy)3(3+) and Ru(bpy)3(3+) were also determined using DNA oligomers containing different guanine (G) sequences from 1 to 10 G. The rate constants of electron-transfer oxidation of the guanine moieties in single- and double-stranded DNA oligomers with Fe(bpy)3(2+) and Ru(bpy)3(3+) are dependent on the number of sequential guanine molecules as well as on pH.     

Photostimulated vectorial electron transfer across the bilayer membrane of lipid vesicles in a system with CdS nanoparticles as photosensitizer and 1,4--bis(1,2,6-triphenyl-4-pyridyl)benzene as a reversible two-electron carrier

Photostimulated vectorial electron transfer through the lecithin bilayer membrane was studied in a system based on lipid vesicles with CdS as a photosensitizer located either in the vesicle inner cavity or outside the vesicles. 1,4-Bis(1,2,6-triphenyl-4-pyridyl)benzene (benzoviologen) was used as an effective lipophilic highly reversible electron carrier incorporated into the bilayer membrane. A peculiarity of this electron carrier is its ability to be reversibly reduced on one and two electrons. The interface electron transfer across the border “vesicular cavity-membrane” was studied by stationary and pulse photolysis. The primary photoreduced form of benzoviologen appears to be that reduced by one electron; however, on stationary photolysis, most benzoviologen molecules appear to be affected by two-electron reduction, which can result from the low mutual mobility of CdS nanoparticles and benzoviologen molecules. The CdS photostimulated transmembrane electron transfer from the internal sacrificial donor to the external acceptor (as regards the vesicular cavity) was performed for [CoEDTA]⁻ as the final electron acceptor. The rate constants of electron transfer from the membrane-embedded two-electron reduced form of benzoviologen have been determined in the case of [CoEDTA]⁻ and O₂ as acceptors.     

Molecular switches controlled by light

The photochemical processes of singlet-singlet energy transfer and photoinduced electron transfer are important not only in natural and artificial photosynthetic energy conversion, but also in a variety of other scientific and technological applications. Controlling these functions at the molecular level using outside stimuli is an interesting scientific challenge. Photochromes, organic molecules that are isomerized by light between two stable forms, can be covalently linked to other chromophores, and changes in their properties resulting from photoisomerization used to switch electron and energy transfer on or off. Simple single- and double-throw molecular switches have been constructed, as well as Boolean logic gates. Such molecules are potentially useful in light-controlled molecular data processing and storage applications.     

Electron Transfer Through Macromolecular Systems

Electron transfer between metal complexes which can be in intimate contact has been the subject of systematic study for about four decades. A major conclusion of the vast amount of work which has been done with intermolecular reactions of ordinary metal complexes is that the reactions are adiabatic, or nearly so (i.e., the only barriers to the reactions are the work of bringing the reagents into contact and the work of exciting them to the isoergic state, which is the configuration reached after the nuclei have readjusted so that the energy of the system is independent of the alternate sites the electron occupies). In adiabatic transfer, the rate of chemical change does not depend on the frequency of electron transfer between the two sites in the isoergic state. The measurement of the rate of electron transfer over large distances, especially when the intervening matter is made up of protein, has been a matter of great interest. At present, it is a very active field of investigation and several different methods for making such measurements have been introduced. The results obtained with one such method, developed by S. S. Isied in 1973, are emphasized. A key feature of the method is that reactions are studied in the intramolecular mode. This is a great simplification because the work of assembling the precursor complex is no longer a factor, and the interesting effects which arise from nonadiabatic behavior are more directly exposed. The method was first applied to simple bridging groups such as 4,4′-bipyridine, which tie the metal-containing moieties (NH₃)₅Co(III) and (NH₃)₅ Ru(III) together. An external reducing agent reduces Ru(III) in preference to Co(III), and the subsequent chemical change, which involves reduction of Co(III) by Ru(II) by an intramolecular process, can be followed spectrophotometrically. The work with these simple bridging ligands showed that unless measures are taken to uncouple the two centers electronically, electron transfer in these systems is adiabatic, a conclusion confirmed by studies of the properties of mixed valence molecules with the same bridging groups. Isied has gone on to study electron transfer through polyprolines using the same general kind of technique. Even with the simplest bridging group of the series, the reactions are nonadiabatic. They become quite slow as the length of the polypeptide chain increases, and with longer chains a conformation change in which the metal centers are brought closer together precedes electron transfer. A similar technique has also been applied by Isied and others to studying the rate of electron transfer between the iron center of cytochrome C and a ruthenium complex attached to a histidine diametrically opposite the heme group.     

吸附色素蛋白与纳米银粒子间的光诱导电子传递

采用表面增强拉曼光谱研究了吸附态微过氧化物酶和细胞色素c的光诱导还原.结果表明,吸附于粗糙银电极表面的过氧化物酶和细胞色素c在413nm激光连续照射下被部分还原.光诱导还原可归因于电极表面纳米银粒子的定域表面等离子体吸收使得自由电子受激,受激电子进而转移进入吸附分子空轨道,导致吸附蛋白质的还原.     

致密二茂铁硫醇自组装膜的电化学行为

合成了11-二茂铁基十一烷基-1-硫醇(HS-(CH₂)₁₁-Fc)，利用自组装膜的特点，通过分子设计将二茂铁基团引入到自组装膜中。在金电极表面构筑有序单分子膜，制备出具有电化学活性的修饰层，研究其电化学行为，作为考察复杂电化学动力学的理想模型。进一步探究其电子传递的特点与自组装膜表面覆盖度之间的联系，提出了一种新的电子传递模型，研究电子转移与膜结构的对应关系，为更深层次的分子设计和功能组装提供理论指导。     

Electrical behavior of molecular junctions incorporating alpha-helical peptide

We synthesized an alpha-helical peptide containing two terminal thiol groups and demonstrated the method of preparation of a self-assembled monolayer (SAM) on gold with uniform orientation of the molecules on the surface. The monolayers were employed as model systems for the investigations of mediated electron transfer. The measurements of electron transfer efficiency through the peptide were performed using scanning tunneling spectroscopy (STS). The molecules were trapped between the gold tip and the substrate using a Au-S linkage. The electron transfer behavior of the peptide was examined as a function of the tip-substrate distance at fixed bias voltage and as a function of bias voltage at a fixed distance between the tip and the substrate. The data obtained from these experiments indicated that the electron transfer through alpha-helical peptide is very efficient, and its conductivity is comparable to those observed for dodecanedithiol. There is also a directional dependence of electron transmission through the peptide, which is connected with the electric field generated by the molecular dipole of the helix.     

Synthesis and studies of covalently linked meso-furyl boron-dipyrromethene-ferrocene conjugates

Four meso-furyl BODIPY-ferrocene conjugates 1–4 in which one or more ferrocene groups were connected directly to BODIPY core or meso-furyl group were synthesized by coupling of appropriate bromo meso-furyl BODIPYs with α-ethynylferrocene under mild Pd(0) coupling conditions. The compounds were characterized by HR-MS mass, NMR, absorption, electrochemistry and fluorescence techniques. The absorption studies of compounds 1–4 showed charge transfer band in addition to BODIPY absorption bands indicating that the BODIPY and ferrocene moieties interact within the conjugates. On the other hand, the charge transfer band is absent in meso-phenyl BODIPY-ferrocene conjugate due to the orthogonal arrangement of ferrocene appended meso-phenyl group with BODIPY core which prevents the interaction between the two moieties. The electrochemical studies showed strong oxidation due to ferrocene moiety and reduction due to meso-furyl BODIPY unit. The compounds 3 and 4 which contain two and three ferrocenyl groups respectively were oxidized at the same potential with two and three electrons involved in the redox process. The compounds 1–4 are weakly fluorescent due to electron transfer from ferrocene unit to BODIPY unit. However, the fluorescence can be restored by oxidizing the ferrocene to ferrocenium ion which prevents the electron transfer between the two moieties. The computational studies support the experimental results.