Self‐Assembly of Coiled Coils in Synthetic Biology: Inspiration and Progress

Biological self‐assembly is very complex and results in highly functional materials. In effect, it takes a bottom‐up approach using biomolecular building blocks of precisely defined shape, size, hydrophobicity, and spatial distribution of functionality. Inspired by, and drawing lessons from self‐assembly processes in nature, scientists are learning how to control the balance of many small forces to increase the complexity and functionality of self‐assembled nanomaterials. The coiled‐coil motif, a multipurpose building block commonly found in nature, has great potential in synthetic biology. In this review we examine the roles that the coiled‐coil peptide motif plays in self‐assembly in nature, and then summarize the advances that this has inspired in the creation of functional units, assemblies, and systems.     

Learning from nature: beta-sheet-mimicking copolymers get organized

The solution structures formed by coil-coil copolymers arise from the selective solvation of one of the two blocks and have been well described. In most cases in such relatively simple synthetic structures there are no specific attractive forces that can aid the aggregation process. Nature, however, provides plenty of inspiring polymeric architectures that are shaped and ordered hierarchically by noncovalent forces. The high level of structural definition displayed by proteins, for example, is unmatched by synthetic polymers. An emerging area of interest in polymer science tries to combine the best of both worlds, the natural and the synthetic, by conjugating synthetic polymers and beta-sheet-forming peptides. Understanding the supramolecular organization of the block copolymers driven exclusively by the intermolecular attractive forces of the peptide sequence is of particular interest. Not only do these peptide-polymer hybrid structures present an interesting new class of materials, they can also provide important insights into self-organization processes prevalent in nature.     

Constructing Large 2D Lattices Out of DNA-Tiles

The predictable nature of deoxyribonucleic acid (DNA) interactions enables assembly of DNA into almost any arbitrary shape with programmable features of nanometer precision. The recent progress of DNA nanotechnology has allowed production of an even wider gamut of possible shapes with high-yield and error-free assembly processes. Most of these structures are, however, limited in size to a nanometer scale. To overcome this limitation, a plethora of studies has been carried out to form larger structures using DNA assemblies as building blocks or tiles. Therefore, DNA tiles have become one of the most widely used building blocks for engineering large, intricate structures with nanometer precision. To create even larger assemblies with highly organized patterns, scientists have developed a variety of structural design principles and assembly methods. This review first summarizes currently available DNA tile toolboxes and the basic principles of lattice formation and hierarchical self-assembly using DNA tiles. Special emphasis is given to the forces involved in the assembly process in liquid-liquid and at solid-liquid interfaces, and how to master them to reach the optimum balance between the involved interactions for successful self-assembly. In addition, we focus on the recent approaches that have shown great potential for the controlled immobilization and positioning of DNA nanostructures on different surfaces. The ability to position DNA objects in a controllable manner on technologically relevant surfaces is one step forward towards the integration of DNA-based materials into nanoelectronic and sensor devices.     

天然产物生物合成:探索大自然合成次生代谢产物的奥秘

天然产物(次生代谢产物)是大自然馈赠给人类的礼物,由于其复杂的骨架结构和良好的药用价值,吸引着化学家们对其进行结构鉴定以及化学合成。尽管人们在天然产物全合成中取得了巨大的成就,但仍然面临着合成路线长、产率低、缺乏选择性等问题。大自然是最伟大的化学家,它利用酶作为催化剂,往往能够高效地合成天然产物。在基因水平上探索大自然合成复杂多样的天然产物的奥秘不仅有助于人们进一步理解和认知有机化学,还为人们开发和利用大自然高效催化化学反应的工具——酶奠定了基础。     

Synthesis and Pharmacology of Proteasome Inhibitors

Shortly after the discovery of the proteasome it was proposed that inhibitors could stabilize proteins which ultimately would trigger apoptosis in tumor cells. The essential questions were whether small molecules would be able to inhibit the proteasome without generating prohibitive side effects and how one would derive these compounds. Fortunately, “Mother Nature” has generated a wide variety of natural products that provide distinct selectivities and specificities. The chemical synthesis of these natural products finally provided access to analogues and optimized drugs of which two different classes have been approved for the treatment of malignancies. Despite these achievements, additional lead structures derived from nature are under investigation and will be discussed with regard to their biological potential and chemical challenges.     

Bio-inspired multifunctional metallic glass

As a novel class of metallic materials, bulk metallic glasses (BMGs) have attracted a great deal of attention owing to their technological promise for practical engineering applications. In nature, biological materials exhibit inherent multifunctional integration, which provides some inspiration for scientists and engineers to construct multifunctional artificial materials. In this contribution, inspired by superhydrophobic self-cleaning lotus leaves, multifunctional bulk metallic glasses (BMG) materials have been fabricated through the thermoplastic forming-based process followed by the SiO₂/soot deposition. To mimic the microscale papillae of the lotus leaf, the BMG micropillar with a hemispherical top was first fabricated using micro-patterned silicon templates based on thermoplastic forming. The deposited randomly distributed SiO₂/soot nanostructures covered on BMG micropillars are similar to the branch-like nanostructures on papillae of the lotus leaf. Micro-nanoscale hierarchical structures endow BMG replica with superhydrophobicity, a low adhesion towards water, and self-cleaning, similar to the natural lotus leaf. Furthermore, on the basis of the observation of the morphology of BMG replica in the Si mould, the formation mechanism of BMG replica was proposed in this work. The BMG materials with multifunction integration would extend their practical engineering applications and we expect this method could be widely adopted for the fabrication of other multifunctional BMG surfaces.     

An investigation into compressive responses of shape memory polymeric cellular lattice structures fabricated by vat polymerization additive manufacturing

A combination of additive manufacturing techniques with shape memory materials, so that the shape, property, or functionality of a 3D printed structure can change as a function of time, has recently created new progress in 4D printing. Low-density lattice structures, due to their unique mechanical properties and engineering characteristics, have been candidates for lightweight structures and energy absorbing applications. In the present work, Rhombic and Body-Centered Cubic (BCC) cellular lattice structures, as well as cylindrical bulk samples, were designed and fabricated with Digital Light Process (DLP) by using shape memory resin. The energy absorption of SMP samples was studied in terms of the capabilities of absorption and recovery. In addition, deformation mechanisms of the structures, the influence of strain rate, cyclic behavior and the strain recovery of the structures after each cycle were investigated. All the studies were done in three different cold, warm and hot programming schemes to evaluate the effects of temperature on shape memory effect of the products. Although both structures showed nearly the same strain recovery rates at all conditions, Rhombic structure was found to possess better functional and structural behaviors than BCC lattice in terms of strength, stiffness, and absorption as well as recovery of the induced energy.     

Structures of carbohydrate-boronic acid complexes determined by NMR and molecular modelling in aqueous alkaline media

The structures of thermodynamically stable aromatic boronic acid : cyclic carbohydrate chelates in aqueous alkaline media have been studied using 1H NMR spectroscopy and molecular modelling. It is found that interacting saccharides must necessarily possess a synperiplanar diol functionality for complexation to occur. While this is possible for furanose structures which tend to have a puckered planar geometry, for pyranose forms it is postulated that bis-complexation occurs with twist conformers of the pyranose ring, providing the ring has the requisite 1,2 : 3,4 polyol stereochemistry; specifically axial,equatorial : equatorial,axial or equatorial,axial : axial,equatorial orientations. In this respect it is possible to be predictive with regard to individual carbohydrate boronic acid interactions and to give reasonably comprehensive structural assignments to complexed components. In this paper twenty four polyhydroxy compounds have been screened using 1H NMR to monitor complexation along with computational techniques on a model system to substantiate proposed structures. It has been found that all of these materials interact with aromatic mono boronic acids as expected and structures for the resulting chelates are proposed.     

仿生矿化增强材料

近年来,随着材料科学领域的发展,机械性能优异且具有特定功能的有机-无机复合材料成为了研究热点。而天然的生物矿化过程产生了在自然界中分布广泛、结构特征多样性、机械性能优异的天然生物矿物,比如牙齿、骨骼、珍珠、贝壳、海胆刺、海洋红虫颚等。这些天然复合增强材料中的矿化组织结构特点和矿化机理为仿生设计与合成具有特定结构、特定功能和优异机械性能的材料提供了理论依据。通过模拟天然过程的仿生矿化方法,利用有机基质调控无机矿物成核生长为固态矿物,最终能够定向组装具有特定有序结构和先进功能的有机-无机复合材料。本文主要综述了自然界中通过生物矿化过程得到的高强度、高韧性的天然复合增强材料,以及受生物矿化增强现象的启发,在化学与材料仿生矿化合成中出现的一些有机-无机复合的增强材料。     

Direct fabrication and harvesting of monodisperse, shape-specific nanobiomaterials

A versatile "top-down" method for the fabrication of particles, Particle Replication In Nonwetting Templates (PRINT), is described which affords absolute control over particle size, shape, and composition. This technique is versatile and general enough to fabricate particles with a variety of chemical structures, yet delicate enough to be compatible with sophisticated biological agents. Using PRINT, we have fabricated monodisperse particles of poly(ethylene glycol diacrylate), triacrylate resin, poly(lactic acid), and poly(pyrrole). Monodisperse particle populations, ranging from sub-200 nm nanoparticles to complex micron-scale objects, have been fabricated and harvested. PRINT uses low-surface energy, chemically resistant fluoropolymers as molding materials, which eliminates the formation of a residual interconnecting film between molded objects. Until now, the presence of this film has largely prevented particle fabrication using soft lithography. Importantly, we have demonstrated that PRINT affords the simple, straightforward encapsulation of a variety of important bioactive agents, including proteins, DNA, and small-molecule therapeutics, which indicates that PRINT can be used to fabricate next-generation particulate drug-delivery agents.     

Bridging the Gap between Industrial and Well‐Defined Supported Catalysts

Many industrial catalysts contain isolated metal sites on the surface of oxide supports. Although such catalysts have been used in a broad range of processes for more than 40 years, there is often a very limited understanding about the structure of the catalytically active sites. This Review discusses how surface organometallic chemistry (SOMC) engineers surface sites with well‐defined structures and provides insight into the nature of the active sites of industrial catalysts; the Review focuses in particular on olefin production and conversion processes.     

Laser-induced forward-transfer with light possessing orbital angular momentum

Helical light fields may carry both orbital angular and spin angular momentum which is respectively associated with their helical wavefronts (optical vortices) and rotating transverse electric fields. Interestingly, these helical light fields interact with materials and the orbital angular momentum of these fields can physically twist a range of materials, including metals, semiconductors, polymers, and liquids. With the aid of spin angular momentum, these fields can also form a range of helical structures. This light-matter interaction based on transfer of angular momentum has the potential to revolutionize industrial processes and enable technologies, such as advanced non-contact and nozzle-free printing. In this review paper, we focus on this printing technique, a process which we herein refer to as optical vortex laser induced forward transfer, and we show how it can be used for the production of next generation printed photonics/electronics/spintronics devices. Herein we review the interactions between the angular momentum of light and materials, and we discuss the ways in which optical vortices can be used to produce a variety of exotic structures. We also discuss the current state-of-the art of laser-induced forward-transfer technologies and detail some of the most novel devices, which have been fabricated using this optical vortex laser induced forward transfer, including hexagonal close-packed photonic-rings and plasmonic nanocores.     

A green chemical approach to the synthesis of tellurium nanowires

Starch, an economical and safe carbohydrate, has been found to be not only an effective reducing agent but also a new morphology-directing agent for the synthesis of tellurium nanowires using commercial H2TeO4 precursor. The obtained tellurium nanowires are of single-crystal in nature, with an average diameter of approximately 25 nm and length up to 10 microm. A possible synthetic mechanism involves the chain-shaped bioorganic molecule acting as a template for the one-dimensional growth of inorganic tellurium. The effects of different chain-shaped structures and concentrations of biomolecules on the nanowire morphology have been investigated and different one-dimensional structures, including thick rods, short nanowires, bunched nanowires, and assembled spikelet structures, have been fabricated. These experimental results have been found to be useful in substantiating the proposed synthetic mechanism.     

受生物启发模拟合成生物矿物材料及其机理研究进展

自然界中存在大量复杂、高度功能化的生物矿物材料如贝壳、珍珠、牙齿、骨骼等,其中很多是非常普通的无机矿物材料。运用仿生合成的思路来制备形貌可控、结构特殊且具有独特性质的材料一直是交叉学科研究的热点,如何模拟生物矿化方法合成功能化材料,正逐渐引起科学界的关注。碳酸钙等生物矿物材料广泛存在于生物和地质体系中,对生物体的特异功能起着极其重要的作用。本文将重点回顾有关碳酸钙等生物矿物材料的生物模拟合成研究的进展。生物矿物合成的微环境主要包括模板和溶液相。本文即从这两方面着手,评述了近年来利用软、硬模板法模拟合成生物矿物的研究进展。     

Macromolecule-metal complex interactions as precursors for the catalytic chemical modification of polymers

Chemical modification of polymers via catalysis has recently emerged as an area of increasing importance in macromolecular chemistry. It provides an efficient synthetic route for the production of novel polymers with desirable physical properties and functional groups which are often inaccessible by conventional polymerization techniques. Diene-based polymers and copolymers are ideal for chemical modification because of the technological importance associated with the parent materials and the reactivities of the double bonds in the polymer chain. In employing organometallic catalysts for such modifications, it has been found that the ligand environment of the catalyst as well as the functionality of the polymer has a profound effect on the nature of the macromolecule-metal complex interaction and the resulting polymer modification. The importance of the macromolecule metal complex interactions and the design of appropriate catalyst systems is illustrated for the hydrogenation, hydroformylation/hydroxymethylation and hydrosilylation of a number of polymers.     

Biomimetic Self‐Healing

Self‐healing is a natural process common to all living organisms which provides increased longevity and the ability to adapt to changes in the environment. Inspired by this fitness‐enhancing functionality, which was tuned by billions of years of evolution, scientists and engineers have been incorporating self‐healing capabilities into synthetic materials. By mimicking mechanically triggered chemistry as well as the storage and delivery of liquid reagents, new materials have been developed with extended longevity that are capable of restoring mechanical integrity and additional functions after being damaged. This Review describes the fundamental steps in this new field of science, which combines chemistry, physics, materials science, and mechanical engineering.     

GRAFT COPOLYMERIZATION OF CELLULOSE,CELLULOSE DERIVATIVES,AND LIGNOCELLULOSE

Abstract

The growth of polymer science has led to the development of new materials in direct competition with natural materials, many of which have been in use since earliest times. This has caused researchers to look more critically at both natural and synthetic macromolecules in order to learn more about their underlying structures and their relation to the properties exhibited by the macromolecules. In this regard, chemical modifications have been devised to impart certain desirable properties of both natural and synthetic macromolecules, and their applications have become an integral part of such chemical modifications. Various chemical modifications (e.g., change of functionality, oxidative degradation, inter- and intramolecular gelation, graft copolymerization), have been practiced to add improved properties to the base polymers. However, among all these methods, modification of polymers via graft copolymerization has been the subject of much interest and has made paramount contribution toward improved industrial and biomedical applications.     

Surface modification of natural cellulose substances:toward functional materials and applications

Combining various synthetic chemical processes and biological assemblies provides a promising strategy for the design and fabrication of functional materials with tailored structures and properties.The unique multilevel structures and morphologies of natural cellulose substances such as ordinary commercial laboratory filter paper make them ideal platforms for the self-assemblies of various functional guest molecules that are to be deposited on the surfaces of their fine structures,and the resulting composite matters show significant potentials for various applications.The surface sol-gel process was employed to deposit ultrathin metal-oxide(e.g.,titania and zirconia)gel films to coat the cellulose nanofibers in bulk filter papers;thereafter,monolayers of specific guest substrates were immobilized onto the surfaces of the metal-oxide gel films.Highly selective,sensitive,and reversible chemosensors based on the surface modification of filter paper were obtained toward the fluorescence and colorimetric detection of various analytes such as heavy-metal ions,inorganic anions,amino acids,and gases.Cellulosebased composite materials with superhydrophobic,antibacterial,or luminescent properties were fabricated by self-assembly approaches toward practical applications.     

A first principle study of pristine and BN-doped graphyne family

Based on first principle calculation using generalized gradient approximation, we report electronic properties of graphyne and its related structures (graphdiyne, graphyne-3, graphyne-4). Boron and nitrogen atoms are systematically substituted into the position of carbon atom and the corresponding changes of the properties are reported. All the structures are found to be direct band gap semiconductors with band gap depending on the concentration and position of the doping material. Our band structure calculation clearly shows that the band gap can be tuned by B–N doping and the spin-polarized calculation depicts the nonmagnetic nature of these structures. The possibility of modulating the band gap provides flexibility for its use in nanoelectronic devices. Projected density of state (PDOS) analysis shed insights on the bonding nature of these novel materials, whereas from the view point of Crystal Orbital Hamilton Population (–COHP) analysis, the nature of chemical bonding between neighbouring atoms and the orbital participating in bonding and antibonding have been explored in details.