Mixing effects on the protonation of some polycarboxylates in NaClaq + KClaq at different ionic strengths

Protonation constants of succinic, 1,2,3-propanetricarboxylic and 1,2,3,4-butanetetracarboxylic anions were determined in NaCl_aq + KCl_aq mixtures, at three ionic strengths, I = 1.2, 3 and 4.5 mol L⁻¹. Experimental evidences showed that the function log K^H = f(y) (y = [Na⁺]/([Na⁺] + [K⁺])) is not linear, indicating mixing effects on the protonation constants. The Guggenheim zeroth approximation holds that the above function can be written as:

     

Crystal chemistry and ion-exchange properties of the layered uranyl iodate K[UO2(IO3)3]

Single crystals of the potassium uranyl iodate, K[UO₂(IO₃)₃] (1), have been grown under mild hydrothermal conditions. The structure of 1 contains two-dimensional sheets extending in the [ab] plane that consist of approximately linear UO₂²⁺ cations bound by iodate anions to yield UO₇ pentagonal bipyramids. There are three crystallographically unique iodate anions, two of which bridge between uranyl cations to create sheets, and one that is monodentate and protrudes in between the layers in cavities. K⁺ cations form long ionic contacts with oxygen atoms from the layers forming an eight-coordinate distorted dodecahedral geometry. These cations join the sheets together. Ion-exchange reactions have been carried out that indicate the selective uptake of Cs⁺ over Na⁺ or K⁺ by 1. Crystallographic data (193 K, MoKα, ): 1, orthorhombic, Pbca, a=11.495(1) Å, b=7.2293(7) Å, c=25.394(2) Å, Z=8, R(F)=1.95% for 146 parameters with 2619 reflections with I>2σ(I).     

Identification of Biomarkers of Necrosis in Xenografts Using Imaging Mass Spectrometry

Xenografts are commonly used to test the effect of new drugs on human cancer. However, because of their heterogeneity, analysis of the results is often controversial. Part of the problem originates in the existence of tumor cells at different metabolic stages: from metastatic to necrotic cells, as it happens in real tumors. Imaging mass spectrometry is an excellent solution for the analysis of the results as it yields detailed information not only on the composition of the tissue but also on the distribution of the biomolecules within the tissue. Here, we use imaging mass spectrometry to determine the distribution of phosphatidylcholine (PC), phosphatidylethanolamine (PE), and their plasmanyl- and plasmenylether derivatives (PC-P/O and PE-P/O) in xenografts of five different tumor cell lines: A-549, NCI-H1975, BX-PC3, HT29, and U-87 MG. The results demonstrate that the necrotic areas showed a higher abundance of Na⁺ adducts and of PC-P/O species, whereas a large abundance of PE-P/O species was found in all the xenografts. Thus, the PC/PC-ether and Na⁺/K⁺ ratios may highlight the necrotic areas while an increase on the number of PE-ether species may be pointing to the existence of viable tumor tissues. Furthermore, the existence of important changes in the concentration of Na⁺ and K⁺ adducts between different tissues has to be taken into account while interpreting the imaging mass spectrometry results.

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Graphical Abstract ?

     

The role of water and K ion in the charge transfer between groups of DNA and the lysine and arginine side chains of histone proteins

We have calculated the charge transfer (CT) between the group of DNA and the lysine (Lys) and arginine (Arg) positive side chains of histones in presence of water and K⁺ ions. The calculations were performed at the HF + MP2 level, using the TZVP basis set. The calculations were corrected for basis set superposition error and besides Mulliken’s population analysis we have introduced the – for charged systems more reliable – natural population analysis. The results show that the bare -Lys and the -Arg interactions become weaker, mainly, due to the presence of the K⁺ ion. We have found 0.067e CT for Lys and 0.050e for Arg.     

Hydrogen Bonding and Solvent Effects on Complexation of Alkali Metal Cations by Lower Rim Calix[4]arene Tetra(O-[N-acetyl-D-phenylglycine methyl ester]) Derivative

Complexation of alkali metal cations with 5,11,17,23-tetra-tert-butyl-26,28,25,27-tetrakis(O-methyl-D-α-phenylglycylcarbonylmethoxy)calix[4]arene (L) was studied by means of spectrophotometric, conductometric and potentiometric titrations at 25 °C. The solvent effect on the binding ability of L was examined by using two solvents with different affinities for hydrogen bonding, viz. methanol and acetonitrile. Despite the presence of intramolecular NH···O=C hydrogen bonds in L, which need to be disrupted to allow metal ion binding, this calix[4]arene amino acid derivative was shown to be an efficient binder for smaller Li⁺ and Na⁺ cations in acetonitrile (lg K _LiL  > 5, lg K _NaL  = 7.66), moderately efficient for K⁺ (lg K _KL  = 4.62), whereas larger Rb⁺ and Cs⁺ did not fit in its hydrophilic cavity. The complex stabilities in methanol were significantly lower (lg K _NaL  =  4.45, lg K _KL  = 2.48). That could be explained by different solvation of the cations and by competition between the cations and methanol molecules (via hydrogen bonds) for amide carbonyl oxygens. The influence of cation solvation on complex stability was most pronounced in the case of Li⁺ for which, contrary to the quite stable LiL ⁺ complex in acetonitrile, no complexation was observed in methanol under the conditions used.     

Stabilities in Water of Alkali Metal Ion Complexes with Dibenzo-24-crown-8 and Dibenzo-18-crown-6 and Their Transfer Activity Coefficients from Water to Nonaqueous Solvents

Stability constants K _ML for the 1:1 complexes of Na⁺, K⁺, Rb⁺, and Cs⁺ with dibenzo-24-crown-8 (DB24C8) and dibenzo-18-crown-6 (DB18C6) in water have been determined by a capillary electrophoretic technique at 25°C. The K _ML sequence is Na⁺ < K⁺ < Rb⁺ < Cs⁺ for DB24C8 and Na⁺ < K⁺ > Rb⁺ > Cs⁺ for DB18C6. Compared with DB18C6, DB24C8 exhibits higher selectivity for K⁺ over Na⁺, but lower selectivity for K⁺, Rb⁺, and Cs⁺. To evaluate the solvation of the complexes in water, their transfer activity coefficients sH₂O between polar nonaqueous solvents and water have been calculated. The sH₂O values provide the following information: interactions with water of the metal ions and of the crown-ether oxygens are greatly reduced upon complexation and the complexes undergo hydrophobic hydration in water; the character of each alkali metal ion in solvation is more effectively masked by DB24C8 than by DB18C6, because of the larger and more flexible ring structure of DB24C8. Solvent effects on the complex stabilities are discussed on the basis of the sH₂O values.     

Theoretical mapping of new L–(N)–L family of species with donor–acceptor bonding between N and ligand L

We perform a computational mapping study of a family of new inorganic species, based on idea of donor–acceptor type bonding between N⁺ and a ligand L with a terminal electron lone pair. The nitrogen ion is seen as being in an atomic ¹D state, with empty 2p acceptor orbitals [I.S.K. Kerkines., A. Papakondylis, A. Mavridis, J. Phys. Chem. A, 2002, 106, 4435]. We consider a series of small ligands, such as PN, CCH⁻, CCCN⁻, , and others. Chemical bonding analysis confirms the suggested bonding picture as characteristic for experimentally known and as well as for most of the predicted species. A number of these new compounds is found to be thermodynamically stable with respect to the existing or . They are candidates for new synthetic targets.     

Theoretical study on the reaction of the Δ ground state of ZrO with CS2 in the gas phase

The mechanisms for the three products ZrS⁺, and ZrOS⁺ of the title reaction have been studied by using B3LYP/6-311+G* and CCSD(T)/SDD+6-311+G* methods. It is found that both ZrS⁺ and formations involve the same O/S exchange process via a four-center transition state TS12 to form an intermediate IM2. Exception of that IM2 can dissociate into the ZrS⁺ product, a favorable intramolecular rearrangement mechanism associated with the formation has been identified, which explains why ZrS⁺ was excluded as a precusor for the formation and why the lower efficiency of the ZrS⁺ formation was observed in experiment. For the formation of ZrOS⁺, two parallel channels (path A and B) yielding their corresponding product isomer have been identified. Path B involving an insertion–elimination mechanism with a calculated barrier underestimated by ca. 25.0 kJ/mol should be attributed to the threshold of 114.8 ± 12.5 kJ/mol assigned in the experiment. But path A should make some contributions to the formation of ZrOS⁺ at elevated energy.     

Study of the thermodynamics and mass transfer kinetics of two enantiomers on a polymeric imprinted stationary phase

The adsorption isotherms of

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- and

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-phenylalanine anilide (PA) on an

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-phenylalanine anilide imprinted stationary phase have been determined using staircase frontal analysis. An aqueous buffer–organic solvent mixture has been used as mobile phase. The measurements were done at temperatures of 40, 50, 60 and 70°C for sample concentrations ranging between 5·10⁻⁴ to 1 g/l. It was found that the adsorption data fit well to both the Freundlich and the Bi-Langmuir isotherm models. Examination of the best values of the numerical coefficients of the Bi-Langmuir model shows that the site class representing the binding sites with the highest binding energy exhibits a very low saturation capacity for the non-imprinted enantiomer, indicating a high selectivity for the imprinted

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-enantiomer. The low energy site class also shows some selectivity for the

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-enantiomer. Mass transfer rate coefficients were obtained for each single breakthrough curve by using the transport model of chromatography. It was found that the mass transfer coefficient of

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-PA increases very rapidly with the sample concentration while there is only a slight increase for the other enantiomer.     

Structural Investigation of the Hormone Melatonin and Its Alkali and Alkaline Earth Metal Complexes in the Gas Phase

Gas phase infrared dissociation spectra of the radical cation, deprotonated and protonated forms of the hormone melatonin, and its complexes with alkali (Li⁺, Na⁺, and K⁺) and alkaline earth metal ions (Mg²⁺, Ca²⁺, and Sr²⁺) are measured in the spectral range 800–1800 cm^?1. Minimum energy geometries calculated at the B3LYP/LACVP++** level are used to assign structural motifs to absorption bands in the experimental spectra. The melatonin anion is deprotonated at the indole-N. The indole-C linking the amide chain is the most favored protonation site. Comparisons between the experimental and calculated spectra for alkali and alkaline earth metal ion complexes reveal that the metal ions interact similarly with the amide and methoxy oxygen atoms. The amide I band undergoes a red shift with increasing charge density of the metal ion and the amide II band shows a concomitant blue shift. Another binding motif in which the metal ions interact with the amide-O and the π-electron cloud of the aromatic group is identified but is higher in energy by at least 18 kJ/mol. Melatonin is deprotonated at the amide-N with Mg²⁺ and the metal ion coordinates to the amide-N and an indole-C or the methoxy-O. These results provide information about the intrinsic binding of metal ions to melatonin and combined with future studies on solvated melatonin-metal ion complexes may help elucidate the solvent effects on metal ion binding in solution and the biochemistry of melatonin. These results also serve as benchmarks for future theoretical studies on melatonin-metal ion interactions.

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Graphical Abstract ?

     

Contact Ion Pairs on a Protonated Azamacrocycle: the Role of the Anion Basicity

A potassium-containing hexaazamacrocyclic dication, [M?H?K]²⁺, is able to add in the gas phase mono- and dicarboxylate anions as well as inorganic anions by forming the corresponding monocharged adducts, the structure of which markedly depends on the basicity of the anion. With anions, such as acetate or fluoride, the neutral hexaazamacrocycle M acts as an acceptor of monosolvated K⁺ ion. With less basic anions, such as trifluoroacetate or chloride, the protonated hexaazamacrocycle [M?H]⁺ performs the unusual functions of an acceptor of contact K⁺/anion pairs.

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Graphical Abstract ?

     

Bienzyme-based visual and spectrophotometric aptamer assay for quantitation of nanomolar levels of mercury(II)

The article describes a bienzyme visual system for aptamer-based assay of Hg(II) at nanomolar levels. The detection scheme is based on the finding that Hg(II) ions captured by aptamer-functionalized magnetic beads are capable of inhibiting the enzymatic activity of uricase and thus affect the formation of H₂O₂ and the blue product, i.e., oxidized tetramethylbenzidine. This strategy allows for a visual detection of Hg(II) at nanomolar levels without additional amplification procedure. Measuring the absorbance at 650 nm, the logarithmic calibration plot is linear in the concentration range of 0.5–50 nM and the limit of detection (LOD) is 0.15 nM. This is as low as the LOD obtained by atomic fluorescence spectrometry (AFS). The ions K⁺, Mg²⁺, Na⁺, Ca²⁺, Cu²⁺, Zn²⁺, Fe³⁺, Al³⁺, Co²⁺, AsO₂ ^?, Ni²⁺, Cd²⁺ and Pb²⁺ do not have a significant effect on color formation. The method was applied to the analysis of (spiked) river water, lake water, mineral water, tap water and certified reference water samples, and the results agreed well with those obtained by AFS or certified values, with recoveries ranging from 97% to 109%. The relative standard deviation for five parallel detections at a 10 nM Hg(II) level is 5.2%.

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Graphical abstract A bienzyme-based visual aptasensor was fabricated for label-free detection of nanomolar Hg²⁺ in water samples without any amplification or enrichment procedure.

     

Specific fragmentation of [(CH3)2CO]Arn heteroclusters induced by the Ar L23- and O K-shell excitation

Ionic fragmentation following the inner-shell photoexcitation of [(CH₃)₂CO]Ar_n heteroclusters was investigated in the Ar L₂₃- and O K-edge regions. A partial ion yield (PIY) measurement revealed that and various acetone fragments (, , , , and CH_mCO⁺) were produced following the Ar L₂₃-shell excitation. In the O K-edge region, the PIY of O⁺ exhibited a sharp resonance peak at the O 1s → π^*(CO) resonance excitation. The selective O⁺ formation was interpreted as the suppression of statistical fragmentation, which was dominant in isolated acetone, owing to the dissipation of excess energy into Ar clusters.     

Numerical modeling of adsorption on microporous adsorbents

Numerical modeling (Monte Carlo method) of the state of water adsorbed in the -cages of the Na and K forms of type A zeolite has shown that the energy parameters of adsorption are determined mainly by interaction of the adsorbed water with the exchange cations. It has been established that the difference between Na⁺ and K⁺ in effective radius has a very pronounced influence on the character of the interaction between adsorbed water and the zeolite framework. The distribution of energy of water interaction with the framework of the Na form is bimodal, but unimodal for the K form. The mean energy of water-molecule interaction with the framework in the case of the K form is practically independent of the degree of pore filling (coverage). At all degrees of filling, there is practically no hydrogen bonding between molecules of adsorbed water.Translated from Izvestiya Akademii Nauk SSSR, Seriya Khimicheskaya, No. 8, pp. 1724–1728, August, 1989.     

Thermodynamic evaluation and optimization of the (Na2SO4 + K2SO4 + Na2S2O7 + K2S2O7) system

A complete, critical evaluation of all phase diagram and thermodynamic data was performed for all phases of the (Na₂SO₄ + K₂SO₄ + Na₂S₂O₇ + K₂S₂O₇) system and optimized model parameters were obtained. The Modified Quasichemical Model in the Quadruplet Approximation was used for modelling the liquid phase. The model evaluates first- and second-nearest-neighbour short-range ordering, where the cations (Na⁺ and K⁺) are assumed to mix on a cationic sublattice, while anions were assumed to mix on an anionic sublattice. The Compound Energy Formalism was used for modelling the solid solutions of (Na,K)₂SO₄ and (Na,K)₂S₂O₇. The models can be used to predict the thermodynamic properties and phase equilibria in multicomponent heterogeneous systems. The experimental data from the literature were reproduced within experimental error limits.