Spectroscopic identification of carbenium and ammonium isomers of protonated aniline (AnH+): IR spectra of weakly bound AnH+ -Ln clusters (L = Ar, N2)

Infrared photodissociation (IRPD) spectra of mass-selected clusters composed of protonated aniline (C6H8N+ = AnH+) and a variable number of neutral ligands (L = Ar, N2) are obtained in the N-H stretch range. The AnH+ -Ln complexes (n < or = 3) are produced by chemical ionization in a supersonic expansion of An, H2, and L. The IRPD spectra of AnH+-Ln feature the unambiguous fingerprints of at least two different AnH+ nucleation centers, namely, the ammonium isomer (5) and the carbenium ions (1 and/or 3) corresponding to protonation at the N atom and at the C atoms in the para and/or ortho positions, respectively. Protonation at the meta and ipso positions is not observed. Both classes of observed AnH+-Ln isomers exhibit very different photofragmentation behavior upon vibrational excitation arising from the different interaction strengths of the AnH+ cores with the surrounding neutral ligands. Analysis of the incremental N-H stretch frequency shifts as a function of cluster size shows that microsolvation of both 5 and 1/3 in Ar and N2 starts with the formation of intermolecular H bonds of the ligands to the acidic NH protons and proceeds by intermolecular pi bonding to the aromatic ring. The analysis of both the photofragmentation branching ratios and the N-H stretch frequencies demonstrates that the N-H bonds in 5 are weaker and more acidic than those in 1/3, leading to stronger intermolecular H bonds with L. The interpretation of the spectroscopic data is supported by density functional calculations conducted at the B3LYP level using the 6-31G* and 6-311G(2df,2pd) basis sets. Comparison with clusters of neutral aniline and the aniline radical cation demonstrates the drastic effect of protonation and ionization on the acidity of the N-H bonds and the topology of the intermolecular potential, in particular on the preferred aromatic substrate-nonpolar ligand recognition motif.     

Interaction of ionic biomolecular building blocks with nonpolar solvents: acidity of the imidazole cation (Im+) probed by IR spectra of Im+-Ln complexes (L = Ar, N2; n < or = 3)

The intermolecular interaction between the imidazole cation (Im+ = C3N2H4+) and nonpolar ligands is characterized in the ground electronic state by infrared photodissociation (IRPD) spectroscopy of size-selected Im+-Ln complexes (L = Ar, N2) and quantum chemical calculations performed at the UMP2/6-311G(2df,2pd) and UB3LYP/6-311G(2df,2pd) levels of theory. The complexes are created in an electron impact cluster ion source, which predominantly produces the most stable isomers of a given cluster ion. The analysis of the size-dependent frequency shifts of both the N-H and the C-H stretch vibrations and the photofragmentation branching ratios provides valuable information about the stepwise microsolvation of Im+ in a nonpolar hydrophobic environment, including the formation of structural isomers, the competition between various intermolecular binding motifs (H-bonding and pi-bonding) and their interaction energies, and the acidity of both the CH and NH protons. In line with the calculations, the IRPD spectra show that the most stable Im+-L dimers feature planar H-bound equilibrium structures with nearly linear H-bonds of L to the acidic NH group of Im+. Further solvation occurs at the aromatic ring of Im+ via the formation of intermolecular pi-bonds. Comparison with neutral Im-Ar demonstrates the drastic effect of ionization on the topology of the intermolecular potential, in particular in the preferred aromatic substrate-nonpolar recognition motif, which changes from pi-bonding to H-bonding. .     

IR spectrum and structure of protonated ethanol dimer: implications for the mobility of excess protons in solution

This Communication reports IR spectra and density functional calculations for the isolated protonated ethanol dimer and its N2-microsolvated complexes, (EtOH)2H+-(N2)n (n = 0-2) to investigate the degree of delocalization of the excess proton in this fundamental building block of an alcohol proton wire. The first spectroscopic characterization of isolated and microsolvated (EtOH)2H+ suggests that the excess proton is (nearly) equally shared between both EtOH units under symmetric solvation conditions (Zundel-type ion, n = 0 and 2), whereas it is largely localized on a single EtOH molecule for asymmetric solvation (Eigen-type ion, n = 1).     

Cooperativity of hydrogen-bonded networks in 7-azaindole(CH3OH)n (n=2,3) clusters evidenced by IR-UV ion-dip spectroscopy and natural bond orbital analysis

IR-UV ion-dip spectra of the 7-azaindole (7AI)(CH(3)OH)(n) (n=1-3) clusters have been measured in the hydrogen-bonded NH and OH stretching regions to investigate the stable structures of 7AI(CH(3)OH)(n) (n=1-3) in the S(0) state and the cooperativity of the H-bonding interactions in the H-bonded networks. The comparison of the IR-UV ion-dip spectra with IR spectra obtained by quantum chemistry calculations shows that 7AI(CH(3)OH)(n) (n=1-3) have cyclic H-bonded structures, where the NH group and the heteroaromatic N atom of 7AI act as the proton donor and proton acceptor, respectively. The H-bonded OH stretch fundamental of 7AI(CH(3)OH)(2) is remarkably redshifted from the corresponding fundamental of (CH(3)OH)(2) by 286 cm(-1), which is an experimental manifestation of the cooperativity in H-bonding interaction. Similarly, two localized OH fundamentals of 7AI(CH(3)OH)(3) also exhibit large redshifts. The cooperativity of 7AI(CH(3)OH)(n) (n=2,3) is successfully explained by the donor-acceptor electron delocalization interactions between the lone-pair orbital in the proton acceptor and the antibonding orbital in the proton donor in natural bond orbital (NBO) analyses.     

FTIR adsorption studies of H2O and CH3OH in the isostructural H-SSZ-13 and H-SAPO-34: formation of H-bonded adducts and protonated clusters

The acidity of the isostructural H-SSZ-13 and H-SAPO-34 has been investigated by transmission FTIR spectroscopy using H2O and CH3OH as molecular probes. Interactions between the zeolitic samples and the probe molecules led to perturbations and proton transfers directly related to the acidity of the materials. The entire set of acidic sites in H-SSZ-13 interacts with H2O and CH3OH to give H-bonded adducts or protonated species. H3O+ is not formed in appreciable amounts upon H2O adsorption on H-SSZ-13, but at high coverages H2O generates clusters that have a proton affinity sufficiently high to abstract protons from the zeolite framework. Parallel experiments carried out for H-SAPO-34 showed that the H2O clusters abstract protons from Br?nsted sites only to a minor extent. Moving to CH3OH, even if it has a higher proton affinity than H2O and should expectingly experience an easier protonation, proton transfer is totally absent in H-SAPO-34 under our set of conditions. The clear evidence of methanol protonation in H-SSZ-13 definitely states the strong acidic character of this material. When irreversibly adsorbed CH3OH is present in H-SSZ-13, an appreciable amount of (CH3)2O is formed upon heating to 573 K. Compared to its SAPO analogue, the present set of data indisputably points to H-SSZ-13 as the strongest Br?nsted acidic material.     

An investigation of the lead(II)-hydroxide system

A detailed investigation of the Pb(II)/OH(-) system has been made in NaClO(4) media at 25 degrees C. Combined UV-vis spectrophotometric-potentiometric titrations at [Pb(II)](T) < or = 10 microM using a long path length cell detected only four mononuclear hydroxide complexes. The values of log beta(1)(q)(), for the equilibria Pb(2+)(aq) + qH(2)O <--> Pb(OH)(q)()((2)(-)(q)()()+)(aq) + qH(+)(aq), were -7.2, -16.1, -26.5, and -38.0 for q = 1-4, respectively, at ionic strength I = 1 M (NaClO(4)). Similar results were obtained at I = 5 M (NaClO(4)). No evidence was found for higher order complexes (q > 4) even at very high [OH(-)]/[Pb(II)] ratios, nor for polynuclear species at [Pb(II)](T) < or = 10 microM. Measurements using (207)Pb-NMR and Raman spectroscopies and differential pulse polarography (DPP) provided only semiquantitative confirmation. The mononuclear Pb(OH)(q)()((2)(-)(q)()()+)(aq) complexes are the only hydrolyzed species likely to be significant under typical environmental and biological conditions.     

IR spectroscopic properties of H(MeOH)n + clusters in the liquid phase: evidence for a proton wire

The long-standing problem of understanding the nature of the "excess proton" in acidified water is simplified by studying the proton in methanol. The 3D network of hydrogen bonds in H(aq) + is reduced to a 1D problem. Infrared spectroscopic characterization of linear chain methanol proton solvates in H(CH3OH)n + for n=2-8 provides insight into some of the puzzling IR spectral features associated with O-H-O vibrations. These include the virtual disappearance of otherwise strong bands from H-bonded methanol molecules adjacent to symmetrical O-H+-O groups. The data indicate that a chain of up to four O--HO bonds either side of this group can act as an electrical wire to separate positive charge. This suggests a refinement of the Grotthuss proton-hopping mechanism for explaining the anomalously high mobility of H+ in H-bonded media.     

Synthesis and Crystal Structure of Complex [Cdq3] [Cd（qH）3]（ClO4）CH3OH（q = 8-Quinolinolate, qH = 8-Quilinolinol）

1 INTRODUCTION 8-Quinolinolate is a very useful ligand and used to synthesize many complexes with special physical properties. For example, the complex tris(8-quinoli- nolate)aluminum(III) displays distinguished physical property in the area of electroluminescence ma- terials[1]. Based on tris(8-quinolinolate)aluminum(III), high-luminance low-voltage driven devices have been made, which opens the route to design low-cost large area displays and illuminators. The crystals thatcontain com…     

Isomer-selective detection of microsolvated oxonium and carbenium ions of protonated phenol: infrared spectra of C6H7O+-Ln clusters (L=Ar/N2, n</=6)

Infrared photodissociation (IRPD) spectra of clusters composed of protonated phenol (C(6)H(7)O(+)) and several ligands L are recorded in the O-H and C-H stretch ranges using a tandem mass spectrometer coupled to a cluster ion source. The C(6)H(7)O(+)-L(n) complexes (L=Ar/N(2), n=1-6) are generated by chemical ionization of a supersonic expansion. The IRPD spectra of mass selected C(6)H(7)O(+)-L(n) clusters obtained in various C(6)H(7)O(+)-L(m) fragment channels (m相似文献   

Geometrical and electronic structures of Au(m)Ag(n) (2 < or = m + n < or = 8)

The structural and electronic properties of Au(m)Ag(n) binary clusters (2 < or = m + n < or = 8) have been investigated by density functional theory with relativistic effective core potentials. The results indicate that Au atoms tend to occupy the surface of Au(m)Ag(n) clusters (n > or = 2 and m > or = 2). As a result, segregation of small or big bimetallic clusters can be explained according to the atomic mass. The binding energies of the most stable Au(m)Ag(n) clusters increase with increasing m+n. The vertical ionization potentials of the most stable Au(m)Ag(n) clusters show odd-even oscillations with changing m+n. The possible dissociation channels of the clusters considered are also discussed.     

Comprehensive analysis of the hydrogen bond network morphology and OH stretching vibrations in protonated methanol-water mixed clusters, H(+)(MeOH)1(H2O)n (n = 1-8)

Density functional theory (DFT) calculations of protonated methanol-water mixed clusters, H (+)(MeOH) 1(H 2O) n ( n = 1-8), were extensively carried out to analyze the hydrogen bond structures of the clusters. Various structural isomers were energy optimized, and their relative energies with zero point energy corrections and temperature dependence of the free energies were examined. Coexistence of different morphological isomers was suggested. Infrared spectra were simulated on the basis of the optimized structures. The infrared spectra were also experimentally measured for n = 3-9 in the OH stretching vibrational region. The observed broad bands in the hydrogen-bonded OH stretch region were assigned in comparison with the simulations. From the DFT calculations, the preferential proton location was also investigated. Clear correlations between the excess proton location and the cluster morphology were found.     

Production of methyl-oxonium ion and its complexes in the core-excited (HC(O)OCH3)n clusters: H/H+ transfer from the alpha carbonyl

Dissociation of free methyl-formate (MF), HC(O)OCH3, and its clusters (MF)n, (HC(O)OCH3)n, induced by core-level excitation was studied near the oxygen K edge by time-of-flight fragment-mass spectroscopy. Besides the protonated clusters, (MF)nH+ with n < or = 15, we identified the production for another series of (MF)mCH3OH2+ with m < or = 14 as well as methyl-oxonium ion, CH3OH2+, characteristic of hydrogen transfer reactions in the cationic clusters. Here; specifically labeled methyl-formate-d (MFD), DC(O)OCH3 was also used to examine the core-excited dissociation mechanisms. Deuterium-labeled experiments indicated that MFD+ with low internal energies, partially generated after the core excitation, produces CH3OD+ via a site-specific deuterium transfer from the alpha carbonyl in the molecular cation and that CH3OD2+ can be formed via the successive transfer of another deuterium from the neighbor molecule in the clusters. The deuteron (proton) transfer was also found to take place preferentially from the alpha carbonyl of the neighbor molecule for the production of deuteronated (MFD)nD+, (protonated (MF)nH+), clusters. The minimal energy requirement paths were examined for dimer (MF)2+ cation to support the present dissociation mechanisms of core-excited (MF)n clusters using ab initio molecular-orbital calculations.     

Acid-base properties of the nucleic-acid model 2'-deoxyguanylyl(5'-->3')-2'-deoxy-5'-guanylate, d(pGpG)3-, and of related guanine derivatives

The dinucleotide d(pGpG) is an often employed DNA model to study various kinds of interactions between DNA and metal ions, but its acid-base properties were not yet described in detail. In this study the six deprotonation reactions of H4[d(pGpG)]+ are quantified. The acidity constants for the release of the first proton from the terminal P(O)(OH)2 group (pKa = 0.65) and for one of the (N7)H+ sites (pKa = 2.4) are estimated. The acidity constants of the remaining four deprotonation reactions were measured by potentiometric pH titrations in aqueous solution (25 degrees C; I = 0.1 M, NaNO3): The pKa values for the deprotonations of the second (N7)H+, the P(O)2(OH)-, and the two (N1)H sites are 2.98, 6.56, 9.54 and 10.11, respectively. Based on these results we show how to estimate acidity constants for related systems that have not been studied, e.g. pGpG, which is involved in the initiation step of a rotavirus RNA polymerase. The relevance of our results for nucleic acids in general is briefly indicated.     

Water-induced folding of 1,7-diammoniumheptane

Effects of hydration on the gaseous structures of diprotonated 1,7-diaminoheptane and protonated heptylamine are investigated by infrared photodissociation (IRPD) spectroscopy and computational chemistry. IRPD spectra in the hydrogen bond stretching region (2800-3900 cm(-1)) indicate that 1,7-diammoniumheptane is linear and that hydration occurs predominantly by alternate solvation of the two protonated amine groups for clusters with up to 10 water molecules. The relative intensities of bonded versus free hydroxyl (OH) stretches are greater in the spectra of 1,7-diammoniumheptane with more than 12 water molecules attached than the corresponding reference spectra of heptylammonium. This indicates that in the larger clusters, 1,7-diammoniumheptane adopts a more folded conformation in which the two protonated amine groups are solvated by a single water nanodrop. These results are supported by molecular dynamics simulations which show more hydrogen bonds in representative folded structures of hydrated 1,7-diammoniumheptane versus those with linear structures. These results indicate that the increase in Coulomb energy as a result of bringing the two positive charges closer together in the folded structures is compensated for by the additional hydrogen bonds that are possible when a single nanodrop solvates both protonated amine groups.     

On the hydrolysis of the dioxouranium(VI) ion in sulfate solutions

The formation of ternary UO2(2+)-(OH-)-SO4(2-) complexes has been studied at 25 degrees C in 3 M NaClO4 ionic medium by measurements with a glass electrode. The solutions had uranium concentrations between 0.3 and 30 mM, sulfate between 20 and 200 mM, and 1.66 < or = [SO4(2-)]/[U(VI)] < or = 300. The hydrogen ion concentration ranged from 10(-3) M to incipient precipitation of basic sulfates. This occurred, depending on the metal concentration, at [H+] between 10(-4) and 10(-5.3) M. In the interpretation of the data the stabilities of binary complexes were assumed from independent sources. The data could be explained with the mixed complexes and equilibria (beta(pqr)(3sigma) refers to pUO2(2+) + qH2O + rSO4(2-) <==> (UO2)p(OH)q(SO4)r(2p-q-2r) + qH+): logbeta222 = -2.94 +/- 0.03, logbeta341 = -9.82 +/- 0.06, logbeta211 = -0.30 +/- 0.09, logbeta212 = 1.09 +/- 0.09, logbeta351 = -15.04 +/- 0.09 and logbeta462 = -14.40 +/- 0.06. The fit could be improved by including UO2OH+ with logbeta110 = -5.1 +/- 0.1. The identity of the minor species remains, however, an open question.     

Nanospheric [M20(OH)12(maleate)12(Me2NH)12]4+ clusters (M = Co, Ni) with O(h) symmetry

Nanospheric hydroxo-bridged clusters of [M(20)(OH)(12)(maleate)(12)(Me(2)NH)(12)](BF(4))(3)(OH)·nH(2)O (M = Co (1), Ni (2)) with O(h) symmetry were afforded under hydrothermal condition with Co(BF(4))(2)·6H(2)O/Ni(BF(4))(2)·6H(2)O and fumaric acid in a DMF/EtOH mixed solvent. They are characterized by elemental analysis, IR, and X-ray diffraction. X-ray single crystal diffraction analyses show that these two complexes are isostructural containing an ideally cubic M(8) core in that each two M atoms are doubly bridged at the edges by one OH(-) and one maleate, while these OH(-) and maleate groups are coordinated further by exterior identical 12 M atoms which construct a perfect M(12) icosahedron to encapsulate the cubic core. To our knowledge, such large clusters with O(h) symmetry are seldom. The variable-temperature magnetic susceptibility studies reveal that these two isostructures exhibit antiferromagnetic interactions.     

The nature of the hydrated proton H(aq)+ in organic solvents

The nature of H(H2O)n(+) cations for n = 3-8 with weakly basic carborane counterions has been studied by IR spectroscopy in benzene and dichloroethane solution. Contrary to general expectation, neither Eigen-type H3O x 3 H2O(+) nor Zundel-type H5O2(+) x 4 H2O ions are present. Rather, the core species is the H7O3(+) ion.     

Structure, stability and spectral signatures of monoprotic carborane acid-water clusters (CBW(n), where n = 1-6)

The gas phase structure, stability, spectra, and proton transfer properties of monoprotic carborane acid-water clusters [CB(11)F(m)H(11-m)(OH(2))(1)]-(H(2)O)(n) (where m = 0, 5, and 10; n = 1-6) have been calculated using density functional theory (DFT) with the Becke's three-parameter hybrid exchange functional and Lee-Yang-Parr correlation functional (B3LYP) using 6-31+G* basis set. Results reveal that Eigen cation defects are found in CBW(n) (where n = 2-6) clusters and these clusters are significantly more stable than the non-Eigen geometry. In addition to the conventional hydrogen bond (H-bond) the role of dihydrogen bond (DHB) and halogen bond (XB) in the stabilization of these clusters can be observed from the molecular graphs derived from the atoms in molecules (AIM) analysis. Spectral information shows the features of Eigen cation and proton oscillation involved in the proton transfer process. The dissociation of proton from the perfluoro derivatives with two water molecules is more favorable when compared to the other derivatives.     

A density functional study on hydrated clusters of orthoboric acid, B(OH)3(H2O)n (n=1–5)

We have calculated the optimized structures and stabilization energies for hydrated clusters of orthoboric acid molecule, B(OH)₃(H₂O)_n (n=1–5), with a hybrid density functional approach. Although some ion-pair structures are revealed in the case of n=4 and 5 clusters, the most stable structure is found to be a non-proton-transferred form up to n=5 hydrated clusters. The calculated IR spectra of the stable B(OH)₃(H₂O)_n of n=3–5 clusters predict small red shifts of hydrogen-bonded OH frequencies. These geometry and IR results are related to the weak acidity nature of orthoboric acid.     

Comparison of various types of hydrogen bonds involving aromatic amino acids

Ab initio calculations are used to compare the abilities of the aromatic groups of the Phe, Tyr, Trp, and His amino acids (modeled respectively by benzene, phenol, indole, and imidazole) to form H-bonds of three different types. Strongest of all are the conventional H-bonds (e.g., OH..O and OH..N). His forms the strongest such H-bond, followed by Tyr, and then by Trp. Whereas OH..phi bonds formed by the approach of a proton donor to the pi electron cloud above the aromatic system are somewhat weaker, they nonetheless represent an important class of stabilizing interactions. The strengths of H-bonds in this category follow the trend Trp > His > Tyr approximately Phe. CH.O interactions are weaker still, and only those involving His and Trp are strong enough to make significant contributions to protein structure. A protonated residue such as HisH(+) makes for a very powerful proton donor, such that even its CH..O H-bonds are stronger than the conventional H-bonds formed by neutral groups.