UHF RPA calculations on large model polyene systems

Unrestricted Hartree-Fock calculations have been performed on even and odd polyenes and both neutral and charged species. The calculations include projection of the pure spin states and the use of the random-phase approximation to obtain screened electron-repulsion integrals. Calculations on even, neutral molecules containing up to seventy-four carbon atoms provide a single-bond length of 1.456 Å and a double-bond length of 1.369 Å for a ΔR∞ value of 0.087 Å, which compares well with experimental data. The functional forms of the bond-alternation, spin-density, and charge-density defects are similar to those reported from earlier treatments. For the odd polyene, the width of the soliton spin-density wave is comparable with the SSH results and the ratio of the total negative spin density to the total positive spin density is 0.25. However, the width of the bond-alternation defect is found to be larger than that found by other investigators.     

Study on the kinetic properties of phosphor in deoxycholate aggregates by phosphorescent quenching methodology

Owing to the unique molecular structure and aggregate behaviors in aqueous solution, dihydroxy bile salts can provide phosphorescent probe with a special microenvironment in which the room temperature phosphorescence of probe can be detected in the presence of dissolved oxygen. It, however, is not very clear how the bile salts work in inducing this kind of oxygen-independent phosphorescence. The present work tries to offer with possible more insights by investigating the particular kinetic behaviors of 3-bromoquinoline (3-BrQ) as probe in sodium deoxycholate (NaDC) aggregate based on phosphorescent quenching methodology. The critical aggregate concentration of NaDC is estimated as about 0.5mM based on the enhancement of probe phosphorescence. As the functions of quencher Cu(2+) and NO(2)(-), the rate constants of various photophysical processes for 3-BrQ are obtained in NaDC solution and full aqueous solution, respectively. In NaDC solution, the quenching rate constant k(cu2+) equals to 1.77x10(7)M(-1)s(-1) k(no-2)(mq) 1.62x10(6)M(-1)s(-1). The exit rate k(-) and entrance rate k(+) are determined to be 16-46s(-1) and 10(6)M(-1)s(-1) levels, respectively. The quenching rate constant k(o2)(q) of dissolved oxygen is estimated as 4.15x10(4)M(-1)s(-1) in air-saturated NaDC solution at 1atm.     

Velocity dependence of polarised rotational transfer rates: close-coupled calculations on model systems

Expressions for the laboratory-frame rate constants for polarised rotational energy transfer, as a function of molecular velocity, have been derived for atom-diatom systems. These equations require the kinetic energy dependence of the collision-frame cross sections, which have been obtained by close-coupled calculations using four different N₂-rare gas potentials over the temperature range 0 to 400 K. The energy dependence of multipolar cross sections is presented as are results for spherical and cylindrical velocity distributions. These model calculations indicate strongly that information on intermolecular potentials may be obtained from polarisation ratio velocity dependence measurements.     

Study of correlation holes. II. CI calculations on model polyatomic systems

The shape of correlation holes in many-electron systems is at present scarcely known, even where correlated wave functions are available. We investigate here the kind of electron correlation brought about by configuration interaction (CI ), within a given basis set, in the wavefunction of a polyatomic system. The model ring system H₆ (in two different bonding circumstances) and H₁₄ have been chosen for a detailed study, because of their paradigmatic importance. We set out the equal-spin and different-spin correlation holes as obtained from complete CI calculations in H6 and partial ct in H₁₄, both within a minimal basis set. We basically find the spinless correlation as being short range, while the spin-dependent correlation holes show long-range oscillations of antiferromagnetic character. We also present a natural spin-geminal analysis of the two-body reduced density matrices in these systems; we find a peculiarity possibly related to the long-range correlation discussed above. Finally, we compare the electron correlation as given from our CI wavefunction to other pictures of electron correlation, as obtained essentially from alternant molecular orbital wave functions and from the electron–gas literature.     

Calcium-amidoborane-ammine complexes: thermal decomposition of model systems

Hydrocarbon-soluble model systems for the calcium-amidoborane-ammine complex Ca(NH(2)BH(3))(2)?(NH(3))(2) were prepared and structurally characterized. The following complexes were obtained by the reaction of RNH(2)BH(3) (R = H, Me, iPr, DIPP; DIPP = 2,6-diisopropylphenyl) with Ca(DIPP-nacnac)(NH(2))?(NH(3))(2) (DIPP-nacnac = DIPP-NC(Me)CHC(Me)N-DIPP): Ca(DIPP-nacnac)(NH(2)BH(3))?(NH(3))(2), Ca(DIPP-nacnac)(NH(2)BH(3))?(NH(3))(3), Ca(DIPP-nacnac)[NH(Me)BH(3)]?(NH(3))(2), Ca(DIPP-nacnac)[NH(iPr)BH(3)]?(NH(3))(2), and Ca(DIPP-nacnac)[NH(DIPP)BH(3)]?NH(3). The crystal structure of Ca(DIPP-nacnac)(NH(2)BH(3))?(NH(3)(3) showed a NH(2)BH(3)(-) unit that was fully embedded in a network of BH???HN interactions (range: 1.97(4)-2.39(4)??) that were mainly found between NH(3) ligands and BH(3) groups. In addition, there were N-H???C interactions between NH(3) ligands and the central carbon atom in the ligand. Solutions of these calcium-amidoborane-ammine complexes in benzene were heated stepwise to 60?°C and thermally decomposed. The following main conclusions can be drawn: 1)?Competing protonation of the DIPP-nacnac anion by NH(3) was observed; 2)?The NH(3) ligands were bound loosely to the Ca(2+) ions and were partially eliminated upon heating. Crystal structures of [Ca(DIPP-nacnac)(NH(2)BH(3))?(NH(3))](∞), Ca(DIPP-nacnac)(NH(2)BH(3))?(NH(3))?(THF), and [Ca(DIPP-nacnac){NH(iPr)BH(3)}](2) were obtained. 3)?Independent of the nature of the substituent R in NH(R)BH(3), the formation of H(2) was observed at around 50?°C. 4)?In all cases, the complex [Ca(DIPP-nacnac)(NH(2))](2) was formed as a major product of thermal decomposition, and its dimeric nature was confirmed by single-crystal analysis. We proposed that thermal decomposition of calcium-amidoborane-ammine complexes goes through an intermediate calcium-hydride-ammine complex which eliminates hydrogen and [Ca(DIPP-nacnac)(NH(2))](2). It is likely that the formation of metal amides is also an important reaction pathway for the decomposition of metal-amidoborane-ammine complexes in the solid state.     

Fluorination suppresses thermal quenching in perovskite QLEDs

正Perovskite nanocrystals and quantum dots(QDs) have attracted great attention due to their potential in optical and optoelectronic applications, especially in ultra-high definition displays because of their high purity of photo/electroluminescence(PL/EL) [1,2]. Although the external quantum efficiency(EQE) of light-emitting diodes(LEDs) based on perovskite quantum dots(PeQDs) has been over 20% [3,4],another key problem, the PL/EL stability, still remains open.The thermal PL/EL quenching phenomenon, which is ubiquitously observed, has not aroused enough attention in this     

Novel covalent bond in proteins: calculations on model systems question the bond stability

We have investigated the sulfilimine covalent link between methionine (Met) and lysine (Lys), recently identified in collagen IV (R. Vanacore, A.-J. L. Ham, M. Voehler, C. R. Sanders, T. P. Conrads, T. D. Veenstra, K. B. Sharpless, P. E. Dawson, B. G. Hudson, Science 2009, 325, 1230), and have explored its stability with respect to both the redox processes and UV radiation by means of advanced computational methods. We have concluded that the bond should be present in a protonated state, (-NH=S-)(+). The bond is characterized by a relatively high standard reduction potential, that is, the bond should not be stable in a typical cell environment; if the sulfilimine bond exists (as suggested by the experiment) then the bond has to be supported by the protein environment. The sulfilimine bond then destabilizes the protein structure with respect to the alternative tertiary structure. We discuss conditions under which the bond could be formed as well as other possible structural arrangements consistent with the Met-Lys stoichiometry; some of the alternative bond motifs are more thermodynamically stable than the sulfilimine bond. We suggest that the character of the Met-Lys contact could be approached via NEXAFS spectroscopy. Finally, we show that the protonation brings photostability to the sulfilimine bond.     

Grid-free density functional calculations on periodic systems

Density fitting scheme is applied to the exchange part of the Kohn-Sham potential matrix in a grid-free local density approximation for infinite systems with translational periodicity. It is shown that within this approach the computational demands for the exchange part scale in the same way as for the Coulomb part. The efficiency of the scheme is demonstrated on a model infinite polymer chain. For simplicity, the implementation with Dirac-Slater Xalpha exchange functional is presented only. Several choices of auxiliary basis set expansion coefficients were tested with both Coulomb and overlap metric. Their effectiveness is discussed also in terms of robustness and norm preservation.     

Accurate density functional calculations on large systems

The theoretical underpinnings of the linear combination of Gaussian-type orbitals (LCGTO ) calculations of the density functional (DF ) energy of molecules and clusters are described. The generating function for three-center integrals of arbitrary angular momenta is given in the solid-spherical-harmonic basis. Variational fitting is described and its accuracy tested. The LCGTO-DF method is used to address questions related to the problem of how it is that the methods of cluster science, i.e., high-energy beams or currents, can be used to make C₆₀ in bulk quantities. In particular, it is shown that C₆₀ is neither especially stable nor is it the only large, stable, perfectly round, approximately sp² carbon molecule. © 1996 John Wiley & Sons, Inc.     

Binding free energy, energy and entropy calculations using simple model systems

Free energy differences are calculated for a set of two model host molecules, binding acetone and methanol. Two active sites of different characteristics were constructed based on an artificially extended C60 fullerene molecule, possibly functionalised to include polar interactions in an otherwise apolar, spherical cavity. The model host systems minimise the necessary sampling of conformational space while still capturing key aspects of ligand binding. The estimates of the free energies are split up into energetic and entropic contributions, using three different approaches investigating the convergence behaviour. For these systems, a direct calculation of the total energy and entropy is more efficient than calculating the entropy from the temperature dependence of the free energy or from a direct thermodynamic integration formulation. Furthermore, the compensating surrounding–surrounding energies and entropies are split off by calculating reduced ligand-surrounding energies and entropies. These converge much more readily and lead to properties that are more straightforwardly interpreted in terms of molecular interactions and configurations. Even though not experimentally accessible, the reduced thermodynamic properties may prove highly relevant for computational drug design, as they may give direct insights into possibilities to further optimise ligand binding while optimisation in the surrounding–surrounding energy or entropy will exactly cancel and not lead to improved affinity.     

Madelung fields from optimized point charges for ab initio cluster model calculations on ionic systems

A simple procedure devised to obtain optimized point charges to represent the Madelung potential is reported and applied to six different crystal structures occurring in ionic systems. Their use in ab initio cluster model calculations is discussed through some selected examples and results compared with those arising from the use of the well-known Evjen method. © 1993 John Wiley & Sons, Inc.     

Intrinsic thermal stability and quenching recovery of thin-film superconductors with thermal boundary resistance

The stability behaviour of a thin-film superconductor under a localized release of thermal disturbance is investigated. Two-dimensional conjugate film/substrate conduction equation with anisotropic thermal conductivity of the film, and Joule heat are employed to investigate effects of substrate and thermal properties on the intrinsic stability and quenching recovery. To consider the thermal boundary resistance between film and substrate, an interfacial-layer model (ILM) with very low diffusivity and an acoustic mismatch model (AMM) are employed. Results show that the thermal boundary resistance influences strongly the intrinsic stability. Thermal boundary resistance increases intrinsic stability if the thermal conductivity of the substrate or the disturbance energy is large. Higher Biot numbers and thermal conductivity ratios of film to substrate in longitudinal direction influence stability favorably. We demonstrate also that operation of a film/substrate system, such as YBCO/MgO, is either intrinsically stable or irrecoverably unstable.The authors wish to express their sincere appreciation to Dr. R. C. Chen for his invaluable advice and suggestions during the course of this paper. This research was supported by the National Science Council of the R. O. C. through grant NSC 83-0401-E-009-006. The computations were performed on the IBM ES/9000 at the National Center For High-Performance Computing.     

Measurement of thermal energy recovery using thermal lens spectrometry in fluorescence quenching experiments

This paper describes some limitations of the pulsed-laser thermal lens method in measuring the heat produced by non-radiative relaxation of excited fluorescent molecules. Simultaneous measurements of the fluorescence intensity and thermal lens signal have been carried out for fluorescein dianion in water and perylene in ethanol. It is shown that complete fluorescence quenching of fluorescein and perylene by potassium iodide and nitromethane, respectively, does not result in full recovery of the thermal energy. The results depend on either the operating mode of the excitation laser or the solvent composition.     

Spin quenching of transition metals deposited on MgO insulator and CdO semiconductor density functional calculations

We have analyzed spin quenching of first row transition metals deposited on (001) defect‐free and defect‐containing surfaces of MgO insulator and CdO semiconductor by means of density functional calculations and embedded cluster model. Clusters of moderate sizes were embedded in the simulated Coulomb fields that closely approximate the Madelung fields of the host surfaces, and relaxation of ions that surround the defect sites was taken into account. Spin states of metals deposited on the defect free surfaces were maintained as in the isolated metals except for Ti, V, and Co on MgO, and Ti, V, and Cr on CdO. On the defect containing surfaces, spin states were maintained too except for Fe on MgO, and V and Cr on CdO. The metal‐support interactions stabilize the low spin state of the adsorbed metal with respect to the isolated metal, but the effect was not in general enough to quench the spin. Spin polarization effects tend to preserve the spin states of the adsorbed metals relative to those of the isolated metals. Although charge transfer took place from the adsorbed metal to the insulator surface, it took place the other way round from the semiconductor surface to the adsorbed metal. The encountered variations in magnetic properties were attributed to the smaller band gap of the semiconductor, and the behavior of a single metal atom adsorbed on a particular surface was a result of a competition between Hund's rule for the adsorbed metal and the formation of a chemical bond at the interface. © 2010 Wiley Periodicals, Inc. Int J Quantum Chem, 2011     

LCAO-MO-SCF-CI semi-empirical π-electron calculations on heteroaromatic systems

The electronic spectra and structures of aromatic monoamino and diamino compounds have been calculated using a modification of the Pariser-Parr-Pople method. Electronic transitions investigated involve singlet-singlet and triplet-triplet - ^* excitations. A limited configuration interaction has been included involving single electron excitations and both single and double electron excitations between the two highest occupied and two lowest unoccupied molecular orbitals. Improvement of oscillator strengths was observed with increasing number of configurations considered. Good agreement was obtained between calculated and experimental molecular ionization potentials.

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Zusammenfassung Mono- und Diaminoaromaten wurden mit der modifizierten PPP-Methode von Adams und Miller untersucht, speziell ihre - ^*-Übergänge und Ionisationspotentiale. CIRechnungen mit einfachangeregten Konfigurationen wie mit einfach und doppeltangeregten Konfigurationen zeigten eine mit der Zahl der Konfigurationen steigende Verbesserung der Oszillatorenstärken.

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Résumé Les spectres électroniques et les structures de composés aromatiques mono et di-aminés ont été calculés en utilisant une variante de la méthode de Pariser-Parr-Pople. Les transitions électroniques étudiées sont les transitions ^* singulet-singulet et triplet-triplet. Une interaction de configurations limitée est introduite en considérant des mono et des di excitations entre les deux plus hautes orbitales moléculaires occupées et les deux plus basses libres. Les forces oscillatrices sont améliorées lorsque le nombre de configurations considérées augmente. Un bon accord est obtenu entre les poteientls d'ionisation moléculaire calculés et expérimentaux.

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This investigation was supported by a National Science Foundation Grant No. GB-4065. Abstracted in part from the Master's thesis of D. R. Forshey, Duquesne University, 1967.     

Relativistic many-body and QED calculations on atomic systems

A review is given of many-body perturbation methods, particularly in the all-order and coupled-cluster forms. Relativistic many-body schemes are analyzed in terms of one- and two-photon potentials, derived by means of QED. A complete second-order (nonradiative) calculation for He-like ions is presented, including repeated Breit interactions as well as the effects of retardation and of negative-energy states, but omitting the Lamb shift. Numerical results of some Lamb-shift calculations are also given. From the analysis, conclusions can be drawn concerning the accuracy of certain relativistic many-body approaches. © 1996 John Wiley & Sons, Inc.