Cyanine dyes as protectors of K562 cells from photosensitized cell damage

Several cyanine dyes were found to protect K562 leukemia cells against toxicity mediated by cis-di(4-sulfonatophenyl)diphenylporphine (TPPS2) and light. Most cyanine dyes derived from dimethylindole were better photoprotectors than cyanine dyes with other structures. This correlated with the fact that cyanine dyes derived from dimethylindole were predominately monomeric at millimolar concentrations within K562 cells, while other cyanine dyes formed aggregates. For cyanine dyes that are derived from dimethylindole and have absorption band wavelengths greater than 700 nm, fluorescence-energy transfer from TPPS2 to the cyanine dye was the most important mechanism for photoprotection. There was no spectroscopic evidence for complex formation between the cyanine dyes and TPPS2. The dimethylindole derivative, 1,1',3,3,3',3'-hexamethylindodicarbocyanine, was an excellent photoprotector, but a poor quencher of TPPS2 fluorescence and a relatively poor singlet-oxygen quencher. This cyanine dye may act by quenching excited triplet TPPS2. Singlet-oxygen quenching may contribute to the photoprotection provided by cyanine dyes not derived from dimethylindole. Differences in the subcellular distribution of the various cyanine dyes studied may have contributed to the different apparent mechanisms of photoprotection.     

Synthesis of cyanine dyes derived from benzotellurazo‐15‐crown‐5

A series of crown ether cyanine dyes including crown ether styryl cyanine dyes, crown ether merocyanine dyes and crown ether squarylium cyanine dyes (unsymmetric and symmetric) derived from key intermediate 2‐methyl‐5,6(15‐crown‐5)benzotellurazole ( 1 ) were prepared.     

Combination of Cyanine Behaviour and Giant Hyperpolarisability in Novel Merocyanine Dyes: Beyond the Bond Length Alternation (BLA) Paradigm

Merocyanine dyes that exhibit antithetic cyanine‐like behaviour and giant first‐order hyperpolarisability (β) values have been designed. These cyanine‐type dyes open up an intriguing route towards molecular‐based electro‐optic materials as well as new second‐harmonic generation dyes for imaging.     

Spiro-Azoles Thiazolidinone in the Synthesis of Polymethine Cyanine Dyes

A series of some spiro azoles (pyrazolone, oxazolone, and/or imidazolone) inconjucton with heterocyclic thiazolidinone derivatives were prepared as starting materials in the synthesis of polymethine cyanine dyes. Reaction of spiro 2-formyl (oxime) azoles thiazolidinone derivatives with equi- and/or molar ratios of 2(4)-methyl substituted heterocyclic quaternary salts afforded the corresponding compound pentamethine, aza-mero cyanine, and azapentamethine cyanine dyes respectively. Elemental analyses, IR, 1 H-NMR, and mass-spectra identified the new spiro heterocyclic compounds and polymethine cyanine dyes. The visible absorption spectra of all new polymethine cyanine dyes were investigated.     

The synthesis and characterization of novel coumarin-containing cyanine dyes via “Click” chemistry

Four novel cyanine dye derivatives (C-Cy(1–4)) in which a coumarin moiety is attached to benzoindole ring of asymmetric trimethine cyanine dyes or hemicyanine dye by 1,2,3-triazole have been successfully synthesized via “Click” reaction between the corresponding alkyl-end cyanine dyes and 3-azidocoumarin. Six reaction systems were employed to find the suitable “Click” conditions of cyanine dyes. It was found that the combination of DMF, CuI and di-i-propylethylamine (DIPEA) was the most excellent system for “Click” reaction. All of the compounds were characterized by ¹H-NMR, MS, UV and FL.     

菁染料和份菁染料薄膜的光稳定性研究

利用UV-Vis吸收光谱仪和光化学反应器研究了菁染料和份菁染料薄膜的光降解动力学.与相应的份菁染料相比,携带正电荷的菁染料薄膜具有相对较好的光稳定性.运用量子化学中的SCF-MO-PM3方法,全优化计算了这些染料的分子几何构型和电子结构,并解释了染料的光稳定性与其分子结构的关系.     

Structural and environmental requirements for quenching of singlet oxygen by cyanine dyes

Singlet-oxygen quenching constants were measured for 19 cyanine dyes in acetonitrile. The most efficient quenchers were 1-butyl-2-[2-[3-[(1-butyl-6-chlorobenz-[cd]indol-2(1H)- ylidene)ethylidene]-2-chloro-1-cyclohexen-1-yl]ethenyl]-6-chlorobenz[cd] indolium and 6-chloro-2-[2-[3-(6-chloro-1-ethylbenz[cd]indol-2(1H)-ylidene) ethylidene]-2-phenyl-1-cyclopenten-1-yl]ethenyl]-1-ethyl-benz[cd]indolium, having quenching constants with diffusion-controlled values of 2.0 +/- 0.1 x 10(10) and 1.5 +/- 0.1 x 10(10) M-1 s-1, respectively. There was a trend toward increased quenching constants for cyanine dyes with the absorption band maxima at longer wavelengths. However, the quenching constants correlated better with the oxidation potentials of the cyanine dyes, suggesting that quenching proceeds by charge transfer rather than energy transfer. The quenching constants for 1,1',3,3,3',3'-hexamethylindotricarbocyanine perchlorate and 1,1'-diethyl-4,4'-carbocyanine iodide were measured in several solvents as well as in aqueous solutions of detergent micelles. In different solvents, the quenching constants varied by as much as a factor of 50. The quenching constants were largest in solvents with the highest values on the pi* scale of Kamlet, Abboud, Abraham and Taft. This was consistent with quenching occurring by charge transfer. Within cells, cyanine dyes concentrate in membrane-bound organelles. The quenching constants were substantial within detergent micelles. To the extent that micelles are models for biological membranes, cyanine dyes may be effective biological singlet-oxygen quenchers.     

Supra-Cyanines: Ultrabright Cyanine-Based Fluorescent Supramolecular Materials in Solution and in the Solid State

Fluorescent materials with high brightness play a crucial role in the advancement of various technologies such as bioimaging, photonics, and OLEDs. While significant efforts are dedicated to designing new organic dyes with improved performance, enhancing the brightness of existing dyes holds equal importance. In this study, we present a simple supramolecular strategy to develop ultrabright cyanine-based fluorescent materials by addressing long-standing challenges associated with cyanine dyes, including undesired cis-trans photoisomerization and aggregation-caused quenching. Supra-cyanines are obtained by incorporating cyanine moieties in a cyclic peptide-based supramolecular scaffold, and exhibit high fluorescence quantum yields (up to 50 %) in both solution and in the solid state. These findings offer a versatile approach for constructing highly emissive cyanine-based supramolecular materials.     

菁染料分子中取代基效应的交替现象

本文利用同系线性规律对菁染料的取代基效应进行了研究.提出菁染料的取代基效应与通常的取代基效应不同,在菁染料分子中取代基效应存在较大的交替现象;根据取代基团的内部结构及其所在位置的关系,推导出一套经验公式,并对菁染料的电子吸收光谱进行了定量计算.本文定量地预测了由苯并硫氮茂环、萘并琉氮茂环和苯并硒氮茂环等组成的菁染料及其衍生物(共一百多个化合物)的电子吸收光谱峰值,与实验值相比,峰值偏离在±5nm内的约占70%左右,在±5-±10nm的约占25%,大于±10nm的约占5%.     

Organic solvent-free synthesis of Cy39 iodide

The iodide salt of the pyrylium dye Cy39 (Cy39I, 1) has been suggested as an alternative of its perchlorate salt, which is widely used for biolabeling applications. A new efficient organic solvent-free procedure for synthesis of 1, allowing for a greener approach to the cyanine dyes, is suggested. The unique combination of solubility and thermostability of both the starting materials and the target Cy39 salt made the performance of the synthesis in an aqueous solution as well as reusing of unreacted starting materials possible.     

Key Structural Elements of Unsymmetrical Cyanine Dyes for Highly Sensitive Fluorescence Turn‐On DNA Probes

Unsymmetrical cyanine dyes, such as thiazole orange, are useful for the detection of nucleic acids with fluorescence because they dramatically enhance the fluorescence upon binding to nucleic acids. Herein, we synthesized a series of unsymmetrical cyanine dyes and evaluated their fluorescence properties. A systematic structure–property relationship study has revealed that the dialkylamino group at the 2‐position of quinoline in a series of unsymmetrical cyanine dyes plays a critical role in the fluorescence enhancement. Four newly designed unsymmetrical cyanine dyes showed negligible intrinsic fluorescence in the free state and strong fluorescence upon binding to double‐stranded DNA (dsDNA) with a quantum yield of 0.53 to 0.90, which is 2 to 3 times higher than previous unsymmetrical cyanine dyes. A detailed analysis of the fluorescence lifetime revealed that the dialkylamino group at the 2‐position of quinoline suppressed nonradiative decay in favor of increased fluorescence quantum yield. Moreover, these newly developed dyes were able to stain the nucleus specifically in fixed HeLa cells examined by using a confocal laser‐scanning microscope.     

A unique paradigm for a Turn-ON near-infrared cyanine-based probe: noninvasive intravital optical imaging of hydrogen peroxide

The development of highly sensitive fluorescent probes in combination with innovative optical techniques is a promising strategy for intravital noninvasive quantitative imaging. Cyanine fluorochromes belong to a superfamily of dyes that have attracted substantial attention in probe design for molecular imaging. We have developed a novel paradigm to introduce a Turn-ON mechanism in cyanine molecules, based on a distinctive change in their π-electrons system. Our new cyanine fluorochrome is synthesized through a simple two-step procedure and has an unprecedented high fluorescence quantum yield of 16% and large extinction coefficient of 52,000 M(-1)cm(-1). The synthetic strategy allows one to prepare probes for various analytes by introducing a specific triggering group on the probe molecule. The probe was equipped with a corresponding trigger and demonstrated efficient imaging of endogenous hydrogen peroxide, produced in an acute lipopolysaccharide-induced inflammation model in mice. This approach provides, for the first time, an available methodology to prepare modular molecular Turn-ON probes that can release an active cyanine fluorophore upon reaction with specific analyte.     

Solid-phase methods for the synthesis of cyanine dyes

We report here a series of studies that explore solid-phase methodologies for the synthesis of various cyanine dyes. The scope of the previously reported catch-and-release method using sulfonyl chloride resin(1) has now been extended to include pentamethine and water-soluble cyanine dyes. We also report a new and chemically distinct synthetic strategy, employing the stepwise attack of heterocyclic carbon nucleophiles on immobilized polyene-chain precursors, allowing the clean synthesis of hydrophobic and hydrophilic trimethine and pentamethine dyes from more easily obtained starting materials. Overall, both approaches appear to be robust and versatile strategies to delivering a wide range of cyanine-based dyes in high purity.     

New Polyfluorinated Cyanine Dyes for Selective NIR Staining of Mitochondria

In this communication, the synthesis of three unknown polyfluorinated cyanine dyes and their application as selective markers for mitochondria are presented. By incorporating fluorous side chains into cyanine dyes, their remarkable photophysical properties were enhanced. To investigate their biological application, several different cell lines were incubated with the synthesized cyanine dyes. It was discovered that the presented dyes can be utilized for selective near-infrared-light (NIR) staining of mitochondria, with very low cytotoxicity determined by MTT assay. This is the first time that polyfluorinated cyanine fluorophores are presented as selective markers for mitochondria. Due to the versatile applications of polyfluorinated fluorophores in bioimaging and materials science, it is expected that the presented fluorophores will be stimulating for the scientific community.     

Polymethine dyes,derivatives of imidazopyridine

Certain new polymethine dyes of the cyanine, merocyanine, and merocyaninocyanine series containing residues of the quaternary salt of 1-methyl-1H-imidazo[4, 5-c]pyridine have been synthesized. A study was made of the coloration of synthesized dyes. Replacement of the benzimidazole residue in the cyanine dyes by the residue of the quaternary salt of 1-methyl-1H-imidazo[4, 5-c]pyridine leads to the intensification of the color of the dyes.     

Tuning the photoinduced electron transfer in near-infrared heptamethine cyanine dyes

An efficient photoinduced electron transfer (PET) system in near-infrared region was described. The PET in heptamethine cyanine dyes was tuned by changing the electron-donating ability of the substituent at the central position of the polymehine chain. 4-Aminophenylthio-substitution led to an efficient PET and the lowest fluorescence quantum yield. The acetylation, protonation or transition metal cation coordination of the amino group could recover fluorescence greatly via suppressing the PET.     

从氧化还原电位的角度看菁染料的光谱增感与结构的相关性

本文用循环伏安法测定了一些菁染料的氧化还原电位,估算了一些未测得的数值,并与收集到的相同条件下的文献值进行了系统的比较。详尽地分析了菁染料的各种结构因素对氧化还原电位,进而对光谱增感作用的影响。从氧化还原电位的角度为选择性能优良的增感染料提供了一个重要的途径。     

菁染料单分子膜覆盖的铂电极的电化学特性

L-B膜作为一种单分子膜技术已经得到了广泛的应用。最近很多人用电化学方法研究覆盖有L-B膜电极的特性^[1,2]。许多工作^[3-5]证明了脂肪酸L-B膜具有很强的抑制离子透过和抑制电子隧道电流的能力。     

短波长菁染料对氯化银乳剂的光谱增感作用

本文利用紫外 可见吸收光谱、光谱曝光等手段研究了5种短波长菁染料,比较了它们在氯化银乳剂上的光谱增感作用,得出3种较好的短波长增感染料,并研究它们在氯化银颗粒上的吸附行为.结果表明,这3种染料在氯化银颗粒上均有吸附,并能有效地提高氯化银乳剂在短波长区的感光度.     

Stable,Wavelength‐Tunable Fluorescent Dyes in the NIR‐II Region for In Vivo High‐Contrast Bioimaging and Multiplexed Biosensing

Small‐molecule organic fluorophores, spectrally active in the 900–1700 nm region, with tunable wavelength and sensing properties are sought‐after for in vivo optical imaging and biosensing. A panel of fluorescent dyes ( CX ) has been developed to meet this challenge. CX dyes exhibit the wavelength tunability of cyanine dyes and have a rigidified polymethine chain to guarantee their stability. They are chemo‐ and photo‐stable in an aqueous environment and have tunable optical properties with maximal absorbing/emitting wavelength at 1089/1140 nm. They show great potential in high‐contrast in vivo bioimaging and multicolor detection with negligible optical cross talk. Förster resonance energy transfer (FRET) between CX dyes was demonstrated in deep tissue, providing an approach for monitoring drug‐induced hepatotoxicity by detection of OONO^?. This report presents a series of NIR‐II dyes with promising spectroscopic properties for high‐contrast bioimaging and multiplexed biosensing.