Vibrational resonances in infrared spectra of uracils

Two regions in the i.r. spectra of uracils are analyzed: (a) the NH stretching region in crystals, and (b) the CO stretching region in matrix-isolated monomers. In these regions there is clear evidence of resonances leading to energy splittings and re-distributions of intensifies. These are: (a) a harmonic resonance between the NH stretching in hydrogen-bonded groups and the CH stretching, and (b) an anharmonic (Fermi) resonance between the CO stretching and a combination band involving the N₃H and CO bending vibrations. A theoretical interpretation of the resonances is presented.     

Antiproliferative activity of ruthenium and osmium clusters with phosphine ligands

New ruthenium and osmium carbonyl clusters with 1,3,5-triaza-7-phosphatricyclo-[3.3.1.13.7]decane and 3,7-diacetyl-1,3,7-triaza-5-phosphabicyclo[3.3.1]nonane ligands were synthesized using Me₃NO as an initiator. The data on antiproliferative activity of new compounds against ovarian carcinoma cell cultures A2780 (cisplatin-sensitive) and A2780cisR (cisplatin-resistant) are reported. The dependence of cytotoxicity on the number of phosphine ligands was demonstrated.     

含硫氮杂环卡宾铁羰基簇合物的合成和结构

Fe~3(CO)~1~2与4个S,N取代的杂环硫代酰胺配前体[SCSC(SR)NNPh(SL~n),其中SL~1:R=Me;SL~2:R=Et;SL~3:R=n-Pr;SL~4:R=i-Bu]反应,合成得到含硫氮杂环卡宾配体的通式为[Fe~3(CO)~8(μ~3-S)~2L]的4个新羰合铁簇合物(1～4)。其配体S原子和杂环卡宾L皆来自配前体SL的劈开。对它们进行了元素分析,IR,^1HNMR和MS表征,并用X射线衍射测定了2的晶体分子结构,表明含硫氮杂环分子片CSC(SR)NNPh(L)的卡宾碳具有sp^2成键特征,其C~卡~宾键长为0.1960nm。2的分子几何构型维持母体物[Fe~3(CO)~9(μ~3-S)~2]的形状,其中卡宾基取代四方锥分子骨架Fe~3S~2基底平面Fe(1)S(1)Fe(3)S(2)的Fe(3)原子上径向位置的一个端羰基CO。     

Isotope effects in the infrared spectra of OCS-He complexes and clusters

Infrared spectra of the OCS-He van der Waals complex and of OCS-He(N) clusters have been studied in the region of the OCS nu1 fundamental band using a tunable diode laser to probe a pulsed supersonic slit jet. For the complex, the spectrum of the normal isotope, 16O12C32S-4He, has been considerably extended and the 34S- and 13C-substituted forms have been recorded for the first time. The data could be analyzed satisfactorily using a conventional asymmetric rotor Hamiltonian with sextic centrifugal distortion terms. For the clusters, the 34S- and 13C-substituted forms have been observed and assigned for N = 2-7, including some transitions with higher J values than previously reported for the normal isotope, e.g., R5. The observed vibrational shifts, relative to the free OCS molecule, were very similar to those of the normal isotope, and most of the difference could be explained by simple scaling. These results constitute a subtle and precise probe of intermolecular forces and dynamical effects in a system which is of current interest for cluster studies.     

Construction of trinuclear iridium clusters through ancillary ortho-carborane-1,2-diselenolato ligands, with simultaneous iridium-induced B-H activation

The reaction of the 16-electron "pseudo-aromatic" complex Cp*Ir[Se2C2(B10H10)] (1, Cp* = eta5-C5Me5) with [Ir(cod)(micro-OC2H5)]2 leads to the trinuclear iridium complexes {(cod)Ir[Se2C2(B10H8)(OC2H5)]}Ir{[Se2C2(B10H10)]IrCp*} (2), {(cod)Ir[Se2C2(B10H8)(OC2H5)]}Ir{[Se2C2(B10H9)]IrCp*} (3), {Cp*Ir[Se2C2(B10H9)]}{IrSe(2)[C2(B10H9)(OC2H5)]}{[Se2C2(B10H10)] IrCp*} (4) and one mononuclear complex Cp*Ir[Se2C2(B10H8)(OC2H5)(2)] (5). The reactivity of 2 was investigated and revealed that transformation from 2 to 3 occurred thermally in solution. The transoid complex 2 (with the carborane diselenolato units in trans position) can be converted in nearly 90% yield to the cisoid complex 3. In complexes 2, 3, two diselenolato carborane ligands bridge the Ir(3) core, which consists of Ir-Ir metal bonds. Compared with transoid 2, the cisoid 3 contains two iridium-boron bonds. Complex 4 consists of three different coordination environment carborane ligands (Ir-B(cluster): {Cp*Ir[Se2C2(B10H9)]}, O-B(cluster): {[Se2C2(B10H9)](OC2H5)}, and intact carborane: {Cp*Ir[Se2C2 (B10H10)]}) without the presence of a metal-metal bond. Analogous reaction of 1 with [Ir(cod)(micro-OCH(3))](2) results in formation of the trinuclear complex {Cp*Ir[Se2C2(B10H9)]}{IrSe(2)[C2(B10H9)(OCH3)]}{[Se2C2(B10H10)]IrCp*} (6) and mononuclear complex Cp*Ir[Se2C2(B10H8)(OCH3)(2)] (7). The structures of 2, 3, 4, 5, 6 and 7 have been determined by crystallographic studies.     

Quantum chemical interpretation of redox properties of ruthenium complexes with vinyl and TCNX type non-innocent ligands

This review provides an overview of density functional theory (DFT) calculations in a consequence with spectroelectrochemical measurements on mononuclear and symmetrically or unsymmetrically bridged di- and tetranuclear ruthenium complexes of vinyl and TCNX ligands. The DFT approach is used for the calculations of molecular structures, vibrational frequencies, electronic and electron paramagnetic resonance (EPR) spectral data. DFT calculations enable us to identity the primary redox site and the electron and spin-density distribution between the individual components for the individual redox congeners. The DFT technique reproduces the spectral properties of the presented complexes and their radical ions. The generally close correspondence between experimental and quantum chemical results demonstrate that modern DFT is a powerful tool to address issues like ligand non-innocence and electron and spin delocalization in systems containing both redox-active metal ions and redox-active ligands.     

Modeling the infrared and raman spectra of silicon dioxide clusters absorbing water

The effect of absorbed water on the dielectric properties of silicon dioxide nanoparticles is studied by the molecular dynamic method. It is demonstrated using the model of flexible molecules that increasing the number of water molecules in the (SiO₂)₅₀ cluster to 40 results in an enhancement of absorption of infrared radiation over the frequency range 0 cm⁻¹ ≤ ω ≤ 1000 cm⁻¹. It is ascertained that the absorption of water molecules by the (SiO₂)₅₀ cluster considerably alters the shape of Raman spectra of light, smoothing all the peaks after the first one, and that water molecules are concentrated near the cluster surface formed by SiO₂ structural units.     

Synthesis, structural features, absorption spectra, redox behaviour and luminescence properties of ruthenium(ii) rack-type dinuclear complexes with ditopic, hydrazone-based ligands

The isomeric bis(tridentate) hydrazone ligand strands 1 a-c react with [Ru(terpy)Cl3] (terpy=2,2':6',2'-terpyridine) to give dinuclear rack-type compounds 2 a-c, which were characterised by several techniques, including X-ray crystallography and NMR methods. The absorption spectra, redox behaviour and luminescence properties (both in fluid solution at room temperature and in rigid matrix at 77 K) of the ligand strands 1 a-c and of the metal complexes 2 a-c have been studied. Compounds 1 a-c exhibit absorption spectra dominated by intense pi-pi* bands, which, in the case of 1 b and 1 c, extend within the visible region, while the absorption spectra of the rack-type complexes 2 a-c show intense bands both the in the UV region, due to spin-allowed ligand-centred (LC) transitions, and in the visible, due to spin-allowed metal-to-ligand charge-transfer (MLCT) transitions. The energy position of these bands strongly depends on the ligand strand: in the case of 2 a, the lowest energy MLCT band is around 470 nm, while in 2 b and 2 c, it lies beyond 600 nm. Ligands 1 a-c undergo oxidation processes that involve orbitals based mainly on the CH3--N--N== fragments. The complexes 2 a-c undergo reversible metal-centred oxidation, while reductions involve the hydrazone-based ligands: in 2 b and 2 c, the bridging ligand is reduced twice and in 2 a once before reduction of the peripheral terpy ligands takes place. Ligands 1 a-c exhibit luminescence from the lowest-lying 1pi-pi* level. Only for complex 2 a does emission occur; this may be attributed to a 3MLCT state involving the bridging ligand. Taken together, the results clearly indicate that the structural variations introduced translate into interesting differences in the spectroscopic, luminescence and redox properties of the ligand strands as well as of the rack-type metal complexes.     

The infrared spectrum of CHD2NC and the ground state structure of methyl isocyanide

Analysis of the rovibration spectrum of CHD₂NC has enabled the rotation parameter (A₀B₀) to be determined. Knowledge of the microwave B₀ and C₀ constants enables A₀(CHD₂NC) to be determined, which, when used in conjunction with all other B₀ and C₀ constants for isotopic methyl isocyanides, allows the ground state structure to be defined within fairly narrow limits. The CH bond length is much shorter than that determined by the substitution technique (r_s structure). It is now in almost perfect agreement with the value predicted by the CH vibration frequency in CHD₂NC, and falls in the range of CH bond lengths exhibited by all other symmetric top methyl group molecules.     

A structure-based analysis of the vibrational spectra of nitrosyl ligands in transition-metal coordination complexes and clusters

The vibrational spectra of nitrogen monoxide or nitric oxide (NO) bonded to one or to several transition-metal (M) atom(s) in coordination and cluster compounds are analyzed in relation to the various types of such structures identified by diffraction methods. These structures are classified in: (a) terminal (linear and bent) nitrosyls, [M(σ-NO)] or [M(NO)]; (b) twofold nitrosyl bridges, [M₂(μ₂-NO)]; (c) threefold nitrosyl bridges, [M₃(μ₃-NO)]; (d) σ/π-dihaptonitrosyls or “side-on” nitrosyls; and (e) isonitrosyls (oxygen-bonded nitrosyls).Typical ranges for the values of internuclear N–O and M–N bond-distances and M–N–O bond-angles for linear nitrosyls are: 1.14–1.20 Å/1.60–1.90 Å/180–160° and for bent nitrosyls are 1.16–1.22 Å/1.80–2.00 Å/140–110°. The [M₂(μ₂-NO)] bridges have been divided into those that contain one or several metal–metal bonds and those without a formal metal/metal bond (M?M). Typical ranges for the M–M, N–O, M–N bond distances and M–N–M bond angles for the normal twofold NO bridges are: 2.30–3.00 Å/1.18–1.22 Å/1.80–2.00 Å/90–70°, whereas for the analogous ranges of the long twofold NO bridges these are 3.10–3.40 Å/1.20–1.24 Å/1.90–2.10 Å/130–110°. In both situations the N–O vector is approximately at right angle to the M–M (or M?M) vector within the experimental error; i.e. the NO group is symmetrical bonded to the two metal atoms. In contrast the threefold NO bridges can be symmetrically or unsymmetrically bonded to an M₃-plane of a cluster compound. Characteristic values for the N–O and M–N bond-distances of these NO bridges are: 1.24–1.28 Å/1.80–1.90 Å, respectively. As few dihaptonitrosyl and isonitrosyl complexes are known, the structural features of these are discussed on an individual basis.The very extensive vibrational spectroscopy literature considered gives emphasis to the data from linearly bonded NO ligands in stable closed-shell metal complexes; i.e. those which are consistent with the “effective atomic number (EAN)” or “18-electron” rule. In the paucity of enough vibrational spectroscopic data from complexes with only nitrosyl ligands, it turned out to be very advantageous to use wavenumbers from the spectra of uncharged and saturated nitrosyl/carbonyl metal complexes as references, because the presence of a carbonyl ligand was found to be neutral in its effect on the ν(NO)-values. The wide wavenumber range found for the ν(NO) values of linear MNO complexes are then presented in terms of the estimated effects of net ionic charges, or of electron-withdrawing or electron-donating ligands bonded to the same metal atom. Using this approach we have found that: (a) the effect for a unit positive charge is [plus 100 cm^?1] whereas for a unit negative charge it is [minus 145 cm^?1]. (b) For electron-withdrawing co-ligands the estimated effects are: terminal CN [plus 50 cm^?1]; terminal halogens [plus 30 cm^?1]; bridging or quasi-bridging halogens [plus 15 cm^?1]. (c) For electro donating co-ligands they are: PF₃ [plus 10 cm^?1]; P(OPh)₃ [?30 cm^?1]; P(OR)₃ (R = alkyl group) [?40 cm^?1]; PPh₃ [?55 cm^?1]; PR₃ (R = alkyl group) [?70 cm^?1]; and η⁵-C₅H₅ [?60 cm^?1]; η⁵-C₅H₄Me [?70 cm^?1]; η⁵-C₅Me₅ [?80 cm^?1]. These values were mostly derived from the spectra of nitrosyl complexes that have been corrected for the presence of only a single electronically-active co-ligand. After making allowance for ionic charges or strongly-perturbing ligands on the same metal atom, the adjusted ‘neutral-co-ligand’ ν(NO)*-values (in cm^?1) are for linear nitrosyl complexes with transition metals of Period 4 of the Periodic Table, i.e. those with atomic orbitals (…4s3d4p): [ca. 1750, Cr(NO)]; [1775,Mn(NO)]; [1796,Fe(NO)]; [1817,Co(NO)]; [ca. 1840, Ni(NO)]. Period 5 (…5s4d5p): [1730 Mo(NO)]; [—, Tc(NO)]; [1745,Ru(NO)]; [1790,Rh(NO)]; [ca. 1845, Pd(NO)]. Period 6 (…6s4f5d6p), [1720,W(NO)]; [1730,Re(NO)]; [1738,Os(NO)]; [1760,Ir(NO)]; [—, Pt] respectively. Environmental differences to these values, e.g. data taken in polar solutions or in the crystalline state, can cause ν(NO)* variations (mostly reductions) of up to ca. 30 cm^?1.Three spectroscopic criteria are used to distinguish between linear and bent NO groups. These are: (i) the values of ν(¹⁴NO) themselves, and (ii) the isotopic band shift – (IBS) – parameter which is defined as [ν(¹⁴NO)–ν(¹⁵NO)], and, (iii) the isotopic band ratio – (IBR) – given by [ν(¹⁵NO/ν¹⁴NO)]. The former is illustrated with the ν(¹⁴NO)-data from trigonal bipyramidal (TBP) and tetragonal pyramidal (TP) structures of [M(NO(L)₄] complexes (where M = Fe, Co, Ru, Rh, Os, Ir and L = ligand). These values indicate that linear (180–170°) and strongly bent (130–120°) NO groups in these compounds absorb over the 1862–1690 cm^?1 and 1720–1525 cm^?1-regions, respectively. As was explicitly demonstrated for the linear nitrosyls, these extensive regions reflect the presence in different complexes of a very wide range of co-ligands or ionic charges associated with the metal atom of the nitrosyl group. A plot of the IBS parameter against M–N–O bond-angle for compounds with general formulae [M(NO)(L)_y] (y = 4, 5, 6) reveals that the IBS-values are clustered between 45 and 30 cm^?1 or between 37 and 25 cm^?1 for linear or bent NO groups, respectively. A plot of IBR shows a less well defined pattern. Overall it is suggested that bent nitrosyls absorb ca. 60–100 cm^?1 below, and have smaller co-ligand band-shifts, than their linear counterparts.Spectroscopic ν(NO) data of the bridging or other types of NO ligands are comparatively few and therefore it has not been possible to give other than general ranges for ‘neutral co-ligand’ values. Moreover the bridging species data often depend on corrections for the effects of electronically-active co-ligands such as cyclopentadienyl-like groups. The derived neutral co-ligand estimates, ν(NO)*, are: (a) twofold bridged nitrosyls with a metal–metal bond order of one, or greater than one, absorb at ca. 1610–1490 cm^?1; (b) twofold bridged nitrosyl ligands with a longer non-bonding M?M distance, ca. 1520–1490 cm^?1; (c) threefold bridged nitrosyls, ca. 1470–1410 cm^?1; (d) σ/π dihaptonitrosyl, [M(η²-NO)], where M = Cr, Mn and Ni; ca. 1490–1440 cm^?1. Isonitrosyls, from few examples, appear to absorb below ca. 1100 cm^?1.To be published DFT calculations of the infrared and Raman spectra of complexes with formulae [M(NO)_4?n(CO)_n] (M = Cr, Mn, Fe, Co, Ni, and n = 0, 1, 2, 3, 4, respectively) are used as models for the assignments of the ν(MN) and δ(MNO) bands from more complex metal nitrosyls.     

Tuning the electronic communication and rates of intramolecular electron transfer of dimers of trinuclear ruthenium clusters: bridging and ancillary ligand effects

Ten new bridged dimers of oxo-centered triruthenium clusters with CO and 4-(dimethylamino)pyridine (dmap), pyridine (py), or 4-cyanopyridine (cpy) as terminal ligands and pyrazine-d(4) (d(4)-pz), 2,5-dimethylpyrazine (dmpz), 2-methylpyrazine (mpz), and 2-chloropyrazine (clpz) as bridging ligands were prepared. The carbonyl stretching frequency, nu(CO), was used as a probe for infrared spectroelectrochemical measurements. In the neutral and doubly reduced states, a single band was observed for each of the dimers, with a shift in frequency due to the oxidation state of the triruthenium clusters. In the singly reduced state, a range of nu(CO) line shapes was observed, depending on the nature of the ligands, from two bands centered at the frequencies of the bands of the neutral and doubly reduced species to one broad band at the average of these two frequencies. By synthesizing new combinations of bridging and ancillary ligands, electronic communication between two bridged triruthenium clusters was effectively tuned, and electron-transfer rates were estimated by IR spectral line-shape analysis. In dimers bridged by the asymmetric ligand mpz, it was possible through selective isotope labeling of one CO ligand to observe "mixed-valence isomers," the two alternate charge distributions of a mixed-valence complex.     

Antisymmetric exchange in the trinuclear clusters of copper (II)

The magnetic susceptibility of Cu₃(C₆H₅N₂O)₃(OH)SO₄ · 10.5 H₂O crystals was measured in the temperature interval 4.2–11 K and magnetic field range 0–50 kOe. The theoretical analysis of the effects of antisymmetric exchange was performed. An adequate interpretation of the experimental results may be done in terms of an antisymmetric exchange which is about 12 cm^?1 in the crystals discussed. The rhombic distortions of the trigonal cluster were shown to reduce the antisymmetric exchange.     

Water oxidation catalysis: influence of anionic ligands upon the redox properties and catalytic performance of mononuclear ruthenium complexes

Aiming at highly efficient molecular catalysts for water oxidation, a mononuclear ruthenium complex Ru(II)(hqc)(pic)(3) (1; H(2)hqc = 8-hydroxyquinoline-2-carboxylic acid and pic = 4-picoline) containing negatively charged carboxylate and phenolate donor groups has been designed and synthesized. As a comparison, two reference complexes, Ru(II)(pdc)(pic)(3) (2; H(2)pdc = 2,6-pyridine-dicarboxylic acid) and Ru(II)(tpy)(pic)(3) (3; tpy = 2,2':6',2"-terpyridine), have also been prepared. All three complexes are fully characterized by NMR, mass spectrometry (MS), and X-ray crystallography. Complex 1 showed a high efficiency toward catalytic water oxidation either driven by chemical oxidant (Ce(IV) in a pH 1 solution) with a initial turnover number of 0.32 s(-1), which is several orders of magnitude higher than that of related mononuclear ruthenium catalysts reported in the literature, or driven by visible light in a three-component system with [Ru(bpy)(3)](2+) types of photosensitizers. Electrospray ionization MS results revealed that at the Ru(III) state complex 1 undergoes ligand exchange of 4-picoline with water, forming the authentic water oxidation catalyst in situ. Density functional theory (DFT) was employed to explain how anionic ligands (hqc and pdc) facilitate the 4-picoline dissociation compared with a neutral ligand (tpy). Electrochemical measurements show that complex 1 has a much lower E(Ru(III)/Ru(II)) than that of reference complex 2 because of the introduction of a phenolate ligand. DFT was further used to study the influence of anionic ligands upon the redox properties of mononuclear aquaruthenium species, which are postulated to be involved in the catalysis cycle of water oxidation.     

Novel infrared spectra for intermolecular dihydrogen bonding of the phenol-borane-trimethylamine complex in electronically excited state

The intermolecular dihydrogen bonding in the electronically excited states of the dihydrogen-bonded phenol-BTMA complex in gas phase was theoretically investigated using the time-dependent density functional theory method for the first time. It was theoretically demonstrated that the S(1) state of the dihydrogen-bonded phenol-BTMA complex is a locally excited state, in which only the phenol moiety is electronically excited. The infrared spectra of the dihydrogen-bonded phenol-BTMA complex in ground state and the S(1) state were calculated at both the O-H and B-H stretching vibrational regions. A novel infrared spectrum of the dihydrogen-bonded phenol-BTMA complex in the electronically excited state was found. The stretching vibrational absorption bands of the dihydrogen-bonded O-H and B-H groups are very strong in the ground state, while they are disappeared in the S(1) state. At the same time, a new strong absorption band appears at the C[Double Bond]O stretching region. From the calculated bond lengths, it was found that both the O-H and B-H bonds in the dihydrogen bond O-H...H-B are significantly lengthened in the S(1) state of the dihydrogen-bonded phenol-BTMA complex. However, the C-O bond in the phenol moiety is markedly shortened in the excited state, and then has the characteristics of C[Double Bond]O group. Furthermore, it was demonstrated that the intermolecular dihydrogen bonds in the electronically excited state of the dihydrogen-bonded phenol-BTMA complex are strengthened, since calculated H...H distance is drastically shortened in the S(1) state.