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1.
2.
Summary cis-Diamminedichloroplatinum(II) (cisplatin) and its substituted ethylenediamine derivativescis-PtCl2(R 2 en) (en=ethylenediamine,R=H,Ph,2-,3-, and 4-PhOH) have been investigated with respect to the possible structures of the hypothetical Transition State Complexes (TSC) of the hydrolytic SN2 reaction in which one Cl is replaced by H2O.TSCs withtrigonal bipyramid (TBP) andsquare pyramid (SP) geometry (coordination number 5), have been studied by Molecular Mechanics (MM) and ExtendedHückel (EH) methods. TheEH andMM energies as well as the number of occurrence (entropy factor) for the cisplatinum compound point to a preferredTBP TSC geometry with NH3 and Cl in axial positions. However, foren and substituteden compounds,TSCs withSP geometries (Cl in apical position) are preferred. The calculatedEH andMM energies of theTBP andSP structures do not differ significantly andTBP SP interconversions may play an essential role inTSC formation. To improve the discrimination, theMM-optimized geometries were treated in terms of displacement coordinates for D3h (TBP) and C4v (SP) by calculating the total distortion vectors (DV).DV identified once again theTBP with NH3 and Cl in axial position as the least-distorted conformer, but it also revealed the combinations of displacement coordinates which shape theTSC geometry.
Molekularmechanische und quantenchemische Untersuchung der bei der Hydrolyse voncis-Diammindichlorplatin(II) und substituiertenBis(ethylendiamin)dichlorplatin(II)-Komplexen auftretenden Spezies, 2. Mitt. Simulierte Übergangszustände
Zusammenfassung cis-Diammindichlorplatin(II) (Cisplatin) und seine substituierten Ethylendiaminderivatecis-PtCl2(R 2 en) (en=Ethylendiamin,R=H, Ph, 2-, 3- und 4-PhOH) wurden im Hinblick auf mögliche Strukturen der hypothetischen Übergangszustandkomplexe (TSC) der hydrolytische SN2-Reaktion (Substitution eines Cl-Atoms durch H2O) untersucht.TSCs mit trigonalbipyramidalen (TBP) und quadratisch-pyramidalen (SP) Geometrien (Koordinationszahl 5) wurden mit molekularmechanischen (MM) und Extended-Hückel-Methoden (EH) behandelt.EH- undMM-Energien sowie entropische Faktoren weisen für Cisplatin auf eine trigonale Bipyramide mit NH3 und Cl in axialen Positionen als bevorzugteTSC-Geometrie hin, während für Komplexe miten-LigandenSP-Geometrien mit Cl in der apicalen Position energetisch begünstigt sind. Da die berechnetenEH- undMM- Energien fürTBP- undSP-Geometrien sehr ähnlich sind, spielen möglicherweiseTBP-SP-Umwandlungen eine wesentliche Rolle bei der Bildung derTSCs. Zur Verbesserung der Unterscheidung wurden für dieMM-optimierten Geometrien die Verschiebungsvektoren (DV) bezüglich D3h (TBP) und C4v (SP) berechnet. Daraus resultierte erneut die trigonale Bipyramide mit NH3 und Cl in den axialen Positionen als das am wenigsten gespannte Konformere; des weiteren konnten mit dieser Methode die Kombinationen der Verschiebungskoordinaten erhalten werden, die für die Ausbildung derTSC-Geometrie verantwortlich sind.
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3.
 The nature and importance of nonadditive three-body interactions in the (H2O)2HCl cluster have been studied by the supermolecule coupled-cluster method and by symmetry-adapted perturbation theory (SAPT). The convergence of the SAPT expansion was tested by comparison with the results obtained from the supermolecule coupled-cluster calculations including single, double, and noniterative triple excitations [CCSD(T)]. It is shown that the SAPT results reproduce the converged CCSD(T) results within 3% at worst. The SAPT method has been used to analyze the three-body interactions for various geometries of the (H2O)2HCl cluster. It is shown that the induction nonadditivity is dominant, but it is partly quenched by the first-order Heitler–London-type exchange and higher-order exchange–induction/deformation terms. This implies that the classical induction term alone is not a reliable approximation to the nonadditive energy and that it will be difficult to approximate the three-body potential for (H2O)2HCl by a simple analytical expression. The three-body energy represents as much as 21–27% of the pair CCSD(T) intermolecular energy. Received: 15 September 1999 / Accepted: 3 February 2000 / Published online: 2 May 2000  相似文献   

4.
In this work, some basic features of the intermolecular bond in gas phase H2S-Ng complexes (Ng = He, Ne, Ar, Kr, Xe, and Rn) have been investigated in detail, coupling information from scattering experiments with results of quantum chemical calculations at the CCSD(T)/aug-cc-pVTZ level. Spectroscopic constants, rotovibrational energies, and lifetime as a function of temperature have been evaluated for the complete family of H2S-Ng systems, and an extensive study of involved intermolecular interactions has been performed. In particular, their nature has been characterized by exploiting Atoms-In-Molecules (AIM), Non-Covalent Interactions (NCI), Symmetry-Adapted Perturbation Theory (SAPT), and Charge Displacement (CD) methods, and it was found that all complexes are bound essentially by near-isotropic van der Waals forces, perturbed by weak-stabilizing charge (electron) transfer contributions. Obtained results also show that these additional contributions increase from He up to Rn, providing an appreciable chemical-stabilizing effect of the noncovalent intermolecular bond for H2S-heavier Ng systems.  相似文献   

5.
In this work, solubility, volumetric and viscosity behavior were studied for the systems containing the environmentally acceptable compounds: liquid poly(ethylene glycol) (PEG200) and three ionic liquids: 1-butyl-3-methylimidazolium dicyanamide ([C4mim][dca]), trihexyltetradecyl phosphonium dicyanamide ([P6,6,6,14][dca]) and 1-hexyl-3-methylimidazolium bis{(trifluoromethyl)sulfonyl}amide ([C6mim][NTf2]). The studies were performed in a temperature range (288.15 to 328.15) K and at a pressure of 0.1 MPa. For the only system that evidenced limited miscibility, namely (PEG200 + [P6,6,6,14][dca]), the temperature-composition phase diagram at 0.1 MPa was determined, mapping the existing one- and two-phase regions. In the homogeneous region of this diagram, densities and viscosities were measured and the excess molar volumes, as well as deviations in viscosity were calculated. For the other two systems, as they are always homogeneous in the temperature ranges of the present work, these measurements and calculations were performed in the full range of compositions. The molecular interactions in the studied systems were scrutinized using the obtained excess molar volumes, deviations of viscosity, as well as Kamlet–Taft parameters of PEG200 and the ionic liquids. In addition, the excess molar Gibbs free energies of activation of viscous flow and the related enthalpies and entropies were calculated and introduced to take into consideration the differences in size of the molecules.  相似文献   

6.
The synthesis and reactivity of a CoI pincer complex [Co(?3P,CH,P‐P(CH)PNMeiPr)(CO)2]+ featuring an η2‐ Caryl?H agostic bond is described. This complex was obtained by protonation of the CoI complex [Co(PCPNMeiPr)(CO)2]. The CoIII hydride complex [Co(PCPNMeiPr)(CNtBu)2(H)]+ was obtained upon protonation of [Co(PCPNMeiPr)(CNtBu)2]. Three ways to cleave the agostic C?H bond are presented. First, owing to the acidity of the agostic proton, treatment with pyridine results in facile deprotonation (C?H bond cleavage) and reformation of [Co(PCPNMeiPr)(CO)2]. Second, C?H bond cleavage is achieved upon exposure of [Co(?3P,CH,P‐P(CH)PNMeiPr)(CO)2]+ to oxygen or TEMPO to yield the paramagnetic CoII PCP complex [Co(PCPNMeiPr)(CO)2]+. Finally, replacement of one CO ligand in [Co(?3P,CH,P‐P(CH)PNMeiPr)(CO)2]+ by CNtBu promotes the rapid oxidative addition of the agostic η2‐Caryl?H bond to give two isomeric hydride complexes of the type [Co(PCPNMeiPr)(CNtBu)(CO)(H)]+.  相似文献   

7.
In the interstellar medium, the H2 adsorption and desorption on the solid water ice are crucial for chemical and physical processes. We have recently investigated the probabilities of H2 sticking on the (H2O)8 ice, which has quadrilateral surfaces. We have extended the previous work using classical MD and ring-polymer molecular dynamics (RPMD) simulations to the larger ice clusters, (H2O)10 and (H2O)12, which have pentagonal and hexagonal surfaces, respectively. The H2 sticking probabilities decreased as the temperature increased for both cluster cases, whereas the cluster-size-independent profiles were observed. It is thought that the size independence of the probabilities is qualitatively understood from the similar binding energies for all the three cluster systems. Furthermore, the RPMD sticking probabilities are smaller than the classical ones because of the reduction in the binding energies owing to nuclear quantum effects, such as vibrational quantization.  相似文献   

8.
Addition of ferrocene to solutions of alkali metal hexamethyldisilazides M(HMDS) in arenes (in which M=Na, K, Rb, Cs) allows the subsequent crystallization of the homologous series of compounds [{(Me(3)Si)(2)NM}(2) (Cp(2)Fe)](infinity) (1-4). Similar reactions using LiHMDS led to the recrystallization of the starting materials. The crystal structures of 1-4 reveal the formation of one-dimensional chains composed of dimeric [{M(HMDS)}(2)] aggregates, which are bridged through neutral ferrocene molecules by eta(5)-cation-pi interactions. In addition, compounds 3 and 4 also contain interchain agostic M--C interactions, producing two-dimensional 4(4)-nets. Whereas 1 and 2 were prepared from toluene, the syntheses of 3 and 4 required the use of tert-butylbenzene as the reaction media. The attempted crystallization of 3 and 4 from toluene resulted in formation of the mixed toluene/ferrocene solvated complexes [{(Me(3)Si)(2)NM)(2)}(2) (Cp(2)Fe)(x)(Tol)(y)](infinity) (in which M=Rb, x=0.6, y=0.8, 5; M=Cs, x=0.5, y=1, 6). The extended solid-state structures of 5 and 6 are closely related to the 4(4)-sheets 3 and 4, but are now assembled from a combination of cation-pi, agostic, and pi-pi interactions. The charge-separated complex [K{(C(6)H(6))(2)Cr}(1.5)(Mes)][Mg(HMDS)(3)] (15) was also structurally characterized and found to adopt an anionic two-dimensional 6(3)-network through doubly eta(3)-coordinated bis(benzene)chromium molecules. DFT calculations at the B3 LYP/6-31G* level of theory indicate that the binding energies of both ferrocene and toluene to the M(HMDS) dimers increases in the sequence Li相似文献   

9.
Orange-red Ag4I(PO4) crystallizes in the monoclinic system, space group P21/m (No. 11), with the unit cell dimensions a=9.0874(6) Å, b=6.8809(5) Å, c=11.1260(7) Å, β=109.450(1)°, and Z=4. The crystal structure is fully ordered; it comprises the silver-iodine three-dimensional positively charged framework hosting the tetrahedral PO43− guest anions. The framework features high coordination numbers for iodine and manifold Ag-Ag bonds ranging from 3.01 to 3.46 Å. The Ag-Ag interaction is bonding, it involves silver 4d and 5s orbitals lying, together with the orbitals of iodine, just below the Fermi level. Though the orbitals of silver and iodine define the conducting properties of the title compound, the interaction between the framework and the guest anions is also important and is responsive to the number of the silver atoms surrounding the PO43− tetrahedra. Ag4I(PO4) melts incongruently at 591 K and produces a mixture of the silver phosphate and an amorphous phase upon cooling. Pure Ag4I(PO4) is a poor conductor with a room temperature conductivity of 3×10−6 S m−1. The discrepancies between the properties observed here and those reported previously in the literature are discussed.  相似文献   

10.
The new organophosphorus proligand (OPPh2)(O2SMe)NR (R = C6H3Pri 2–2,6) (3) was prepared as a white crystalline solid by reacting the lithiated compound Li[Ph2P(O)NR] with MeSO2Cl in a 1:1 molar ratio. The precursor Ph2P(O)NHR (1), as well as its thio analogue Ph2P(S)NHR (2), were obtained in the reaction between the lithiated amine RNHLi and the corresponding organophosphorus chloride. All compounds were characterized by multinuclear (1H, 13C, and 31P) NMR spectroscopy. The molecular structures of 1–3 were established by single-crystal X-ray diffraction. A zigzag polymeric chain is formed in the crystals of 1 and 2 by hydrogen N–H···X (X = O, S) bonding, while the crystal of 3 contains discrete monomeric units with a syn–syn conformation of the O?P(C)2–N–S(C)(?O)2 skeleton.

Supplemental materials are available for this article. Go to the publisher's online edition of Phosphorus, Sulfur, and Silicon and the Related Elements to view the free supplemental file.  相似文献   

11.
Two new triterpene saponins, albidosides H (1) and I (2), along with the three known saponins were isolated from the barks of Acacia albida. Their structures were elucidated on the basis of extensive 1D- and 2D-NMR studies and mass spectrometry. Albidosides H (1) and I (2) were assayed for their cytotoxicity against HeLa and HL60 cells using MTT method.  相似文献   

12.
Molecular dynamics simulations of [Gd(egta)(H(2)O)](-) (egta(4-)=3,12-bis(carboxymethyl)-6,9-dioxa-3,12-diazatetradecanedioate(4-)) have been performed without any artificial constraint on the first coordination sphere, such as covalent bonds between the Gd(3+) and the coordination sites. Two new crystallographic structures were determined for this gadolinium chelate and used to start two molecular dynamics simulations. [Gd(egta)(H(2)O)](-) and [Gd(egta)](-) were both observed during the simulations, with a mean volume for the reaction of dissociation [Gd(egta)(H(2)O)](-)-->[Gd(egta)](-)+H(2)O of +7.2 cm(3)mol(-1), which corroborates the previously published experimental value of +10.5 cm(3)mol(-1). Changes in the conformation of the complex with the inversion of several dihedral angles are observed in the simulations independently from the water dissociation. Very fast changes of the third-order rotation axis direction of the Gd(3+) coordination polyhedron (of symmetry D(3h)) are observed during the simulations and are related to the mechanism of electronic relaxation of the complex. Different rotational correlation times (tau(R)) were calculated from the simulations on various observables of the complex. Protons of the inner sphere have different tau(R). The mean tau(R) of the two Gd-HW(HW=hydrogen of water molecule) vectors is 72% lower than tau(R) of the complex, and 75% lower than tau(R) of the vector Gd-OW (OW=oxygen of water molecule). This discrimination of the tumbling rates should be taken into account in future global (17)O NMR, EPR and NMRD (nuclear magnetic relaxation dispersion) data analysis.  相似文献   

13.
The effect of addition of sodium anthranilate to 5 mM micellar solutions of gemini surfactant 1,4-bis(N-hexadecyl-N,N-dimethylammonium)butane dibromide is investigated by 1H NMR. The solubilization site of anthranilate anion near the micellar surface is inferred. In the micelles, the An ions intercalate among the surfactant headgroups producing morphological changes.  相似文献   

14.
The crystal structure of (1-naphthyl)(4-methyl- phenyl)tellurium(IV) dibromide, the first unsymmetrical naphthyl containing diorganotellurium(IV) dibromide, shows the formation of one-dimensional supramolecular arrays where Te···Br secondary bonds link two parallel rows of molecules in a gear-teethed fashion. The weaker C–H···Br and C–H···π hydrogen bonds play important role in the formation of three-dimensional crystal lattice by cross linking these supramolecular motifs.  相似文献   

15.
The geometries and interaction energies of complexes of pyridine with C6F5X, C6H5X (X=I, Br, Cl, F and H) and RFI (RF=CF3, C2F5 and C3F7) have been studied by ab initio molecular orbital calculations. The CCSD(T) interaction energies (Eint) for the C6F5X–pyridine (X=I, Br, Cl, F and H) complexes at the basis set limit were estimated to be ?5.59, ?4.06, ?2.78, ?0.19 and ?4.37 kcal mol?1, respectively, whereas the Eint values for the C6H5X–pyridine (X=I, Br, Cl and H) complexes were estimated to be ?3.27, ?2.17, ?1.23 and ?1.78 kcal mol?1, respectively. Electrostatic interactions are the cause of the halogen dependence of the interaction energies and the enhancement of the attraction by the fluorine atoms in C6F5X. The values of Eint estimated for the RFI–pyridine (RF=CF3, C2F5 and C3F7) complexes (?5.14, ?5.38 and ?5.44 kcal mol?1, respectively) are close to that for the C6F5I–pyridine complex. Electrostatic interactions are the major source of the attraction in the strong halogen bond although induction and dispersion interactions also contribute to the attraction. Short‐range (charge‐transfer) interactions do not contribute significantly to the attraction. The magnitude of the directionality of the halogen bond correlates with the magnitude of the attraction. Electrostatic interactions are mainly responsible for the directionality of the halogen bond. The directionality of halogen bonds involving iodine and bromine is high, whereas that of chlorine is low and that of fluorine is negligible. The directionality of the halogen bonds in the C6F5I– and C2F5I–pyridine complexes is higher than that in the hydrogen bonds in the water dimer and water–formaldehyde complex. The calculations suggest that the C? I and C? Br halogen bonds play an important role in controlling the structures of molecular assemblies, that the C? Cl bonds play a less important role and that C? F bonds have a negligible impact.  相似文献   

16.
Calculation of excess properties in N,N-dimethylacetamide + 2-methoxyethanol binary mixtures at (298.15, 308.15 and 318.15) K from experimental density, viscosity and sound velocity values were presented in previous work. Applications of these experimental values to test different correlation equations as well as their corresponding relative functions were also reported. Considering the quasi-equality between the Arrhenius activation energy Ea and the enthalpy of activation of viscous flow ΔH*, here we can define partial molar activation energy Ea1 and Ea2 for N,N-dimethylacetamide and 2-methoxyethanol, respectively, along with their individual contribution separately. Correlation between Arrhenius parameters reveals interesting Arrhenius temperature with a comparison to the vaporisation temperature in the liquid vapour equilibrium, and the limiting corresponding partial molar properties that can permit us to estimate the boiling points of the pure components.  相似文献   

17.
The apparent molal volumes of aqueous ZnCl2 and Zn(ClO4)2 solutions have been measured from 15–55°C. The dilute solution data are extrapolated to infinite dilution using the Redlich-Meyer equation. The full concentration range data are fitted with the Pitzer formalism. The data are then compared with the data on the previously measured salts of Mn2+, Fe2+, Co2+, Ni2+, and Cu2+. The effect of complex ion formation is easily seen in the Cu2+ and Zn2+ salt data. A new approach to single ion volumes from salt volumes is proposed. The calculated ionic volumes at infinite dilution are compared, and it is clear that crystal field effects must be considered in any quantitative theory of transition element volumes.  相似文献   

18.
19.
We study the spin chain behavior, a transition to 3D magnetic order and the magnitudes of the exchange interactions for the metal-amino acid complex Cu(D,L-alanine)2∙H2O, a model compound to investigate exchange couplings supported by chemical paths characteristic of biomolecules. Thermal and magnetic data were obtained as a function of temperature (T) and magnetic field (B0). The magnetic contribution to the specific heat, measured between 0.48 and 30 K, displays above 1.8 K a 1D spin-chain behavior that can be fitted with an intrachain antiferromagnetic (AFM) exchange coupling constant 2J0=(−2.12±0.08) cm−1 (defined as ex(i,i+1) = −2J0Si⋅Si+1), between neighbor coppers at 4.49 Å along chains connected by non-covalent and H-bonds. We also observe a narrow specific heat peak at 0.89 K indicating a phase transition to a 3D magnetically ordered phase. Magnetization curves at fixed T = 2, 4 and 7 K with B0 between 0 and 9 T, and at T between 2 and 300 K with several fixed values of B0 were globally fitted by an intrachain AFM exchange coupling constant 2J0=(−2.27±0.02) cm−1 and g = 2.091±0.005. Interchain interactions J1 between coppers in neighbor chains connected through long chemical paths with total length of 9.51 Å cannot be estimated from magnetization curves. However, observation of the phase transition in the specific heat data allows estimating the range 0.1≤|2J1|≤0.4 cm−1, covering the predictions of various approximations. We analyze the magnitudes of 2J0 and 2J1 in terms of the structure of the corresponding chemical paths. The main contribution in supporting the intrachain interaction is assigned to H-bonds while the interchain interactions are supported by paths containing H-bonds and carboxylate bridges, with the role of the H-bonds being predominant. We compare the obtained intrachain coupling with studies of compounds showing similar behavior and discuss the validity of the approximations allowing to calculate the interchain interactions.  相似文献   

20.
Matthew Gardlik 《Tetrahedron》2009,65(35):7213-3013
Four molecular baskets 1-4, each comprising a modular bowl-shaped platform and a set of distinctive aromatic gates, were synthesized. The gates were made to incorporate a nitrogen heteroatom at different positions, as in 2-4, or without a coordinating nitrogen, as in 1 (Fig. 1). For polydentate 3 and 4, the location of the nitrogen was revealed to have an effect on directing the basket's coordination to Ag(I) cation, and subsequent folding to enclose space. The folded geometries were shown to encompass a helical, Ag(I):3, or C3v/C2v symmetrical, Ag(I):4, dynamic arrangement of the gates (from density functional theory). For 2 and 1, however, the presence of Ag(I) caused the sole formation of oligomers and the absence of coordinating interactions, respectively. Variable temperature (VT) 1H and 19F NMR measurements of Ag(I):3 did not provide direct evidence for the solvation of its inner space and the encapsulation of the BF4 counterion. Moreover, CH3CN or CH3NC substrates were not found inside of Ag(I):3. The finding is in contrast with the behavior of Cu(I):3, which is known to encapsulate these guests. The intriguing guest selectivity was accounted for by small structural and electronic differences of Ag(I)/Cu(I) folded baskets. The X-ray solid-state structural studies of 2, 3, and 4 revealed the basket's capacity to fill its inner space with small compounds. Thus, 3 was found with an ordered molecule of chloroform, while 4 contained molecules of CH3OH and H2O. The basket selectivity for enclosing and positioning guests, in the solid state, was deduced to be guided by their size and weak host-guest and guest-guest noncovalent interactions.  相似文献   

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