Label dilution method: a novel tool for bioligand interaction studies using bead injection in the lab-on-valve format

This work introduces a novel method, label dilution, which is analogous to the well-established isotope dilution method. The principle is tested on a model system of commercially available antibodies and protein-coated Sepharose beads and implemented using micro-bead injection in the lab-on-valve format. This micro-scale method uses a labeled form of the target molecule as an internal standard. Label dilution employs ratiometric measurements using the absorbance signals from the label and the target molecules for quantitative determination of an analyte. The label dilution method is shown to discriminate between selective and non-selective binding and provides a means for monitoring bioligand interactions in real time. With a detection limit of 470 ng of IgG, this method provides a sensitive, automated technique for the determination of low-level analytes in complex samples. This technique has been developed with the aim of using it to facilitate diabetes research in which the interactions between autoantibodies and the molecules they target are a central focus.     

Copper-catalyzed synthesis of primary arylamines via cascade reactions of aryl halides with amidine hydrochlorides

We have developed an efficient method for the synthesis of primary arylamines from aryl halides using amidine hydrochlorides as the ammonia surrogates. The protocol uses 10 mol % CuI as the catalyst, 20 mol % L-proline as the ligand, Cs2CO3 as the base, and DMF as the solvent and proceeds the sequential coupling of aryl halides with amidine hydrochlorides and hydrolysis of intermediates to give the target products. This is a convenient, inexpensive, and practical approach to primary arylamines.     

Determination of teicoplanin in plasma using microbore high-performance liquid chromatography and injection-generated gradients.

A reversed-phase isocratic high-performance liquid chromatographic method for the determination of total teicoplanin in plasma is reported. The method developed uses a bracketing injection technique in conjunction with large injection volumes on a 1 mm diameter column to form a limited injection-generated gradient. The chromatography yields adequate resolution among all the major components for individual quantitation and also allows quantitation of total teicoplanin in plasma using ultraviolet detection. Pretreatment is by solid-phase extraction which uses C8 Bond Elut cartridges and gives effective clean up from endogenous materials. The method offers a faster and simplified means to determine total teicoplanin in plasma than those previously reported, and has a detection limit of 50 ng/ml.     

Application of 1,10-phenanthroline for preconcentration of selected heavy metals on silica gel

Stripping voltammetry analysis using a hemispheroidal mercury microelectrode has been previously assessed theoretically as a possible candidate ‘primary method’ for amount of substance measurement. It was shown that the measurement methodology can be described completely by a set of measurement equations when a novel quantification process is employed to measure the steady-state diffusion-limited deposition current over an optimum sampling time, instead of employing an analyte stripping step. The corollary is that, for solutions of known composition, the method may be used for highly accurate determination of diffusion coefficients. This investigation uses experimental data from steady-state diffusion-limited current measurements with sampling periods optimised using Allan deviation techniques, together with a full uncertainty analysis to estimate feasibility and likely accuracy of this method.     

A photoplate calibration technique applied to the determination of hafnium in zirconium by SSMS

A photoplate calibration procedure is suggested for spark source mass spectrometry /SSMS/ with photoplate detection. The technique uses the Churchill two-line method applied to the two stable isotopes of copper. The calibration curve thus obtained is split into fragments and each fragment is approximated by a polynomial. The method was applied for the quantitative determination of Hf as impurity in zirconium sponge obtained from a pilot plant dedicated to the depletion of the hafnium content in zirconium by fractional crystallization.     

Synchronous fluorescence for simultaneous determination of hydroquinone and resorcinol in air samples

Several phenolic compounds are present in tobacco smoke. They are formed from the pyrolysis of tobacco during the smoking process and all of them are toxic. Therefore, the determination of these compounds in air samples is important. A rapid, simple, and sensitive method using a synchronous spectrofluorimetry technique was developed to quantify hydroquinone and resorcinol simultaneously. One of the advantages of this method is the simple and rapid sampling technique, which uses water as the absorption solution of the analytes in the air sample. The precision of the method (%RSD) was 1.8% and the detection limits were 0.125 mg m^–3 and 0.292 mg m^–3 for hydroquinone and resorcinol, respectively.     

Simple method for the determination of trace levels of pesticides in honeybees using matrix solid-phase dispersion and gas chromatography

A simple multiresidue method for the determination of insecticides in honeybees is described. The developed method is based on the matrix solid-phase dispersion technique. A total number of 12 insecticides (azinfos-methyl, buprofezin, chlorpyriphos, chlorpyriphos-methyl, diazinon, ethion, fenitrothion, fipronil, methidathion, phosalone, pirimicarb, propoxur) used on flowering fields are determined by this method. The method uses Florisil and silica as dispersing agents, alumina and silica as cleanup adsorbents and a low polarity solvent system to elute pesticide residues from the honeybee samples. The insecticides were quantified using capillary gas chromatography with a nitrogen-phosphorus detector. The method has shown good recovery (70-110%) for various levels of spiked samples (0.01-1.0 mg/kg). The relative standard deviations were in the range of 2-8% for all pesticides studied. The limits of detection were in the range of 0.005-0.05 mg/kg. The procedure can be applied for the determination of residues of low-polarity and medium polarity pesticides in honeybee samples.     

A novel technique for improving interferometric determination of emulsion film thickness by digital filtration

Determination of the thickness of emulsion films by using the film interferometric images is usually less accurate than that of foam films, due to the close values of the refractive indices of the liquid film and adjacent liquid phases (hence, low contrast and high level of noise at high magnification). A new technique was developed to improve the thickness determination by obtaining the interferometric images without directly filtering the illuminating light, as is usually done in the classical Scheludko interferometric technique. The new method then uses digital filtration during the off-line image post-processing to obtain monochromatic interferometric images required for the thickness determination. The technique was tested with foam films stabilised by sodium dodecyl sulfate and successfully applied to determine thickness of toluene-water-toluene emulsion films using the green and red digital filters. Results for emulsion film thickness determined by either the green or red digital filtration are comparable, thus validating the new technique developed here for emulsion films.     

Comparison between direct and indirect immunofluorescence method for determination of somatic cell count

A sensitive indirect immunofluorescence (IF) assay for bovine neutrophil and somatic cell counting was developed. The obtained indirect IF was compared with direct IF. The direct IF method uses a single-fluorophore-conjugated antibody directed against the target of interest. The indirect IF method uses two antibodies. The primary antibody is unconjugated. The secondary antibody is directed against the primary and has fluorescent marker. Calibration curves for somatic cells (SC) in buffer model solutions were obtained by both methods, using fluorescence spectrophotometry. The measured linear range of somatic cells by the direct method was from 2?×?10⁴ to 3?×?10⁶ cells and by the indirect method was from 3?×?10⁴ to 3?×?10⁶ cells. The signal obtained by the indirect method was higher than the direct method at low concentrations of SC (from 30,000 to 100 000 cells/mL). That signal amplification probably is due to more than one fluorescent secondary antibody coupling to bound primary antibody. The same effect is observed by fluorescence microscopy. Consequently, the indirect IF method is more sensitive than the direct IF method. Conjugated primary antibodies are more expensive than their unconjugated counterparts, and secondary antibodies are relatively inexpensive. Therefore, using the same conjugated secondary antibody to detect different primary antibodies is cost-effective. Furthermore, a two-color staining microscopic procedure was proposed for simultaneous estimation of total SC count and neutrophil cell count.     

Preparative isotachophoresis with surface enhanced Raman scattering as a promising tool for clinical samples analysis

A surface enhanced Raman scattering (SERS) spectrometry is an interesting alternative for a rapid molecular recognition of analytes at very low concentration levels. The hyphenation of this technique with advanced separation methods enhances its potential as a detection technique. Until now, it has been hyphenated mainly with common chromatographic and electrophoretic techniques. This work demonstrates for a first time a power of preparative isotachophoresis-surface enhanced Raman scattering spectrometry (pITP-SERS) combination on the analysis of model analyte (buserelin) in a complex biological sample (urine). An off-line identification of target analyte was performed using a comparison of Raman spectra of buserelin standard with spectra obtained by the analyses of the fractions from preparative isotachophoretic runs. SERS determination of buserelin was based on the method of standard addition to minimize the matrix effects. The linearity of developed method was obtained in the concentration range from 0.2 to 1.5 nmol L(-1) with coefficient of determination 0.991. The calculated limit of detection is in tens of pico mols per liter.     

Sequential determination of uranium (IV), free acidity and hydrazine in a single aliquot

A simple analytical procedure for the sequential determination of uranium (IV), free acidity and hydrazine in presence of hydrolysable ions is developed and described. In this method, first, uranium (IV) is determined using fiber optic aided spectrophotometry then same solution is used for determination of free acidity and hydrazine. Free acid is titrated with standard sodium carbonate solution after uranium (IV) is masked with EDTA. Once the end point for the free acid is determined at pH 3.0, an aliquot of formaldehyde is added to liberate the acid equivalent to hydrazine which is then titrated with the same standard sodium carbonate solution using an automatic titration system. The described method is simple, accurate and reproducible. The overall recovery of uranium (IV), nitric acid and hydrazine is 98% with 3% relative standard deviation respectively. The major advantage of the method is that it uses sodium carbonate a primary standard as titrant and generation of corrosive analytical wastes containing oxalate or sulphate is avoided. Valuable metals like uranium and plutonium can easily be recovered from analytical waste before final disposal.     

Binding constant determination of drugs toward subdomain IIIA of human serum albumin by near-infrared dye-displacement capillary electrophoresis

Drug binding to serum albumin influences several important pharmacological properties such as toxicity, solubility, activity, distribution, and excretion. It is therefore of interest to have methodologies that allow for the determination of drug-albumin affinity constants while simultaneously providing information on the location of the drug binding site. In the present work we describe a method for the determination of binding constants of drugs known to bind to subdomain IIIA of serum albumin. Drugs used in the study were ketoprofen, ibuprofen, quinidine, naproxen, imipramine, and clofibrate. Binding constants of the drugs were determined by near-infrared dye-displacement capillary electrophoresis. The dye-displacement technique uses a competitive-type interaction between the drug of interest and a dye probe to arrive at a binding constant. A heptamethine cyanine dye was used as a probe for drug binding at subdomain IIIA of serum albumin. The utility of the dye as a noncovalent label for serum albumin was investigated. Additionally, the ability of the method to illustrate enantioselective binding is shown. The dye displacement technique has advantages over current electrophoresis-based techniques in that it is faster and uses less reagent.     

Accelerated extraction for determination of polycyclic aromatic hydrocarbons in marine biota

A rapid and simple method is proposed for determination of polycyclic aromatic hydrocarbons (PAH) in complex matrices such as marine biota. The method uses sonication, by means of an ultrasonic probe, as a new tool for assisted extraction, coupled with reversed-phase liquid chromatography (RP-LC) with fluorescence detection (FL) for determination of 16 US EPA priority PAH. Separation and detection of the 16 PAH were complete in 45 min by RP-LC with a C₁₈ column and acetonitrile–water gradient elution. Multivariate optimisation of the variables affecting extraction (ultrasound radiation amplitude, sonication time, and temperature of the water-bath in which the extraction cell was placed) was conducted. The accuracy of the method was determined by analysis of a certified reference material and comparison of the results obtained with those from another method (microwave-assisted extraction and GC–MS). The new technique avoids the main problems encountered in the determination of PAH in complex matrices such as marine biota, and no clean-up step is necessary. The method was applied to determination of PAH in estuarine biota samples from the Urdaibai estuary (Biscay, Spain).     

Quantitative evaluations of surface-concentrated amino groups on monolithic-type solid supports prepared by copolymerization method

We have prepared novel monolithic-type highly cross-linked solid supports having surface amino group using a copolymerization method of functional monomers and cross-linking monomer. From the view point of controlled surface functionalities, we have firstly certified and proved quantitative determination methods of the surface amino groups to utilize and evaluate those solid supports prepared as affinity resins. We utilized a typical titration method and ninhydrin method that have been effectively utilized for quantitative determination of primary amine and amino acid. The ninhydrin method was calibrated using octylamine as a standard compound (R ² = 0.998) and proved applicability for the quantitative determination of other primary amines. A commercially available solid support, Affigel, was able to be quantitatively evaluated only by the ninhydrin method, while Toyopearl afforded just compatible amino group density to the value certified by the manufacturer only through titration method. The obtained incompatible results using both determination methods have been unclear at this moment. On the other hand, both determination methods afforded compatible amino group density of the prepared solid support. The obtained value was up to 126 μmol/ml, which was 94% of the calculated theoretical value based on the feed composition. The results suggested surface-concentrated introduction of amino groups. Based on the determination methods, especially ninhydrin method, we prepared the monolithic-type solid supports having various densities of surface amino groups and proved quantitative and surface-concentrated introduction of amino groups. Those amino groups were able to react with a relatively large ligand molecule, methotrexate, quantitatively and also with controlled density. The obtained results strongly suggest that the novel monolithic-type solid supports have possible advantages when we utilize those as affinity resins for target peptide analyses.     

A strategy for enhancing the quantitative determination ability of the diffuse reflectance near-infrared spectroscopy

Near-infrared diffuse reflectance spectroscopy (NIRDRS) has been proved to be a convenient and fast quantitative method for complex samples. The high detection limit or the low sensitivity of the method, however, is a big problem obstructing its application in the analysis of low concentration samples. A strategy for quantitative determination of low concentration samples was developed by using NIRDRS. The method takes an adsorbent as a substrate for gathering the analytes from a solution, and uses the multivariate calibration technique for quantitative calculation. So, the detection limit can be improved and the interferences can be eliminated when complex samples are analyzed. Taking benzoic and sorbic acids as the analyzing targets and the alumina as the adsorbent, partial least squares (PLS) model is built from the NIRDRS of the adsorbates. The results show that the concentrations that can be quantitatively detected are as low as 0.011 and 0.013 mg mL(-1) for benzoic and sorbic acids, respectively, and the co-adsorbates do not interfere each other.     

Orthogonal signal correction-partial least squares method for simultaneous spectrophotometric determination of cypermethrin and tetramethrin

The simultaneous determination of cypermethrin and tetramethrin mixtures by using spectrophotometric method is a difficult problem in analytical chemistry, due to spectral interferences. By multivariate calibration methods, such as partial least squares (PLS) regression, it is possible to obtain a model adjusted to the concentration values of the mixtures used in the calibration range. Orthogonal signal correction (OSC) is a preprocessing technique used for removing the information unrelated to the target variables based on constrained principal component analysis. OSC is a suitable preprocessing method for partial least squares calibration of mixtures without loss of prediction capacity using spectrophotometric method. In this study, the calibration model is based on absorption spectra in the 200-350 nm range for 25 different mixtures of cypermethrin and tetramethrin. Calibration matrices were containing 0.1-12.9 and 0.1-13.8 microg mL(-1) for cypermethrin and tetramethrin, respectively. The RMSEP for cypermethrin and tetramethrin with OSC and without OSC were 0.0884, 0.0614 and 0.2915, 0.2309, respectively. This procedure allows the simultaneous determination of cypermethrin and tetramethrin in synthetic and real samples good reliability of the determination was proved.     

Simultaneous spectrophotometric determination of mercury and palladium with Thio-Michler's Ketone using partial least squares regression and orthogonal signal correction

A simple, novel and sensitive spectrophotometric method was described for simultaneous determination of mercury and palladium. The method is based on the complex formation of mercury and palladium with Thio-Michler's Ketone (TMK) at pH 3.5. All factors affecting on the sensitivity were optimized and the linear dynamic range for determination of mercury and palladium found. The simultaneous determination of mercury and palladium mixtures by using spectrophotometric method is a difficult problem, due to spectral interferences. By multivariate calibration methods such as partial least squares (PLS), it is possible to obtain a model adjusted to the concentration values of the mixtures used in the calibration range. Orthogonal signal correction (OSC) is a preprocessing technique used for removing the information unrelated to the target variables based on constrained principal component analysis. OSC is a suitable preprocessing method for PLS calibration of mixtures without loss of prediction capacity using spectrophotometric method. In this study, the calibration model is based on absorption spectra in the 360-660 nm range for 25 different mixtures of mercury and palladium. Calibration matrices were containing 0.025-1.60 and 0.05-0.50 microg mL(-1) of mercury and palladium, respectively. The RMSEP for mercury and palladium with OSC and without OSC were 0.013, 0.006 and 0.048, 0.030, respectively. This procedure allows the simultaneous determination of mercury and palladium in synthetic and real matrix samples good reliability of the determination.     

Site-Identification by Ligand Competitive Saturation (SILCS) assisted pharmacophore modeling

Database screening using receptor-based pharmacophores is a computer-aided drug design technique that uses the structure of the target molecule (i.e. protein) to identify novel ligands that may bind to the target. Typically receptor-based pharmacophore modeling methods only consider a single or limited number of receptor conformations and map out the favorable binding patterns in vacuum or with a limited representation of the aqueous solvent environment, such that they may suffer from neglect of protein flexibility and desolvation effects. Site-Identification by Ligand Competitive Saturation (SILCS) is an approach that takes into account these, as well as other, properties to determine 3-dimensional maps of the functional group-binding patterns on a target receptor (i.e. FragMaps). In this study, a method to use the FragMaps to automatically generate receptor-based pharmacophore models is presented. It converts the FragMaps into SILCS pharmacophore features including aromatic, aliphatic, hydrogen-bond donor and acceptor chemical functionalities. The method generates multiple pharmacophore hypotheses that are then quantitatively ranked using SILCS grid free energies. The pharmacophore model generation protocol is validated using three different protein targets, including using the resulting models in virtual screening. Improved performance and efficiency of the SILCS derived pharmacophore models as compared to published docking studies, as well as a recently developed receptor-based pharmacophore modeling method is shown, indicating the potential utility of the approach in rational drug design.     

Analytical method for assessing exposure of greenhouse applicators to procymidone by gas chromatography and whole body dosimetry

Summary An analytical method for the determination of the potential and actual exposure of agricultural workers to procymidone has been developed. The methodology is based on the whole body technique, using Tyvek Pro-Tech and Sontara as sampling media, and uses hexane extraction, GC-ECD analysis and GC-MSD confirmation. The validation of the analytical method has been carried out incorporating the matrix of coverall in all steps when calculating parameters such as retention time window, limits of detection and quantification, linear ranges and precision. A field sampling strategy has also been developed and the method has been applied to the evaluation of the potential and actual dermal exposure of an applicator and an assistant in normal working conditions.     

Simultaneous spectrophotometric determination of cobalt,copper and nickel using 1-（2-thiazolylazo）-2-naphthol by chemometrics methods

The simultaneous determination of cobalt, copper and nickel using 1-（2-thiazolylazo）-2-naphthol （first figure of this article） by spectrophotometric method is a difficult problem in analytical chemistry, due to spectral interferences. By multivariate calibration methods, such as partial least squares （PLS） regression, it is possible to obtain a model adjusted to the concentration values of the mixtures used in the calibration range. Orthogonal signal correction （OSC） is a preprocessing technique used for removing the information unrelated to the target variables based on constrained principal component analysis. OSC is a suitable preprocessing method for PLS calibration of mixtures without loss of prediction capacity using spectrophotometric method. In this study, the calibration model is based on absorption spectra in the 550-750-nm range for 21 different mixtures of cobalt, copper and nickel. Calibration matrices were formed from samples containing 0.05-1.05, 0.05-1.30 and 0.05-0.80 μg·mL^-1 for cobalt, copper and nickel, respectively. The root mean square error of prediction （RMSEP） for cobalt, copper and nickel with OSC and without OSC were 0.007, 0.008, 0.011 and 0.031,0.037, 0.032 μg· mL^-1, respectively. This procedure allows the simultaneous determination of cobalt, copper and nickel in synthetic and real samples and good reliability of the determination was proved.