Molecular Recognition‐Mediated Transformation of Single‐Chain Polymer Nanoparticles into Crosslinked Polymer Films

We describe single‐chain polymer nanoparticles (SCNPs) possessing intramolecular dynamic covalent crosslinks that can transform into polymer films through a molecular recognition‐mediated crosslinking process. The SCNPs utilise molecular recognition with surface‐immobilised proteins to concentrate upon a substrate, bringing the SCNPs into close spatial proximity with one another and allowing their dynamic covalent crosslinkers to undergo intra‐ to interpolymer chain crosslinking leading to the formation of polymeric film. SCNPs must possess both the capacity for specific molecular recognition and a dynamic nature to their intramolecular crosslinkers to form polymer films, and an investigation of the initial phase of film formation indicates it proceeds from features which form upon the surface then grow predominantly in the xy directions. This approach to polymer film formation presents a potential method to “wrap” surfaces displaying molecular recognition motifs—which could potentially include viral, cellular and bacterial surfaces or artificial surfaces displaying multivalent recognition motifs—within a layer of polymer film.     

Chemical Communication between Organometallic Single-Chain Polymer Nanoparticles

Chemical communication between macromolecules was studied by observing the controlled single chain collapse that ensues the exchange of a metal cross-linker between two polymer chains. The rhodium (I) organometallic cross-linker transfer from a low molecular weight collapsed polybutadiene to a larger polymer was followed using size exclusion chromatography. The increased effective molarity in the larger polymer seems to be the driving force for the metal migration. Thus, we demonstrate here a strategy for transferring a molecular signal that induces chain collapse of a polymer chain based on non-covalent interactions, mimicking biological behaviors reminiscent of signal transductions in proteins.     

Bifunctional atomic force microscopy probes for molecular screening applications

Force mapping with the atomic force microscope (AFM) allows the simultaneous acquisition of topography and probe-sample interaction data. For example, AFM probes functionalised with an antigen can be employed to map the spatial distribution of recognition events on a substrate functionalised with its specific antibody. However, to date this method has been limited to the detection of single receptor-ligand species. Were the detection of multiple receptor-ligand interactions possible, force mapping would offer great scope as a sensitive tool for bioassay and screening applications. We have developed an immobilisation strategy, which allows two different molecular species (in this case human serum albumin and the β subunit of human chorionic gonadotropin) to be present simultaneously on an AFM probe. Single point force spectroscopy results have revealed the ability of such probes to discriminate between their corresponding recognition points (anti-HSA and anti-βhCG IgG antibodies). As a control, force measurements were re-recorded in the presence of the known antigen (free in solution) for each antibody species and a marked decrease in the frequency of specific interaction is observed. As an additional control interactions between anti-βhCG IgG and the multifunctional probe are taken in the presence of free βhCG (“true” antigen) and free HSA (“false” antigen). It is shown that measurements recorded in the presence of a non-related protein species results in no change in either the force observed or the frequency of specific interactions, further confirmation that the specificity of force observed is due to the separation of antibody-antigen complex.     

高分子金属络合物的性能及应用进展

介绍了高分子金属络合物的种类及合成。综述了高分子金属络合物不同于低分子络合物的催化性能、电学性能、光学性能和磁性 ,以及高分子金属络合物作为催化剂、光学材料、电学材料等方面的应用进展。     

Rapid colorimetric detection of antibody-epitope recognition at a biomimetic membrane interface.

Biomolecular recognition of antigens and epitopes by antibodies is a fundamental event in the initiation of immune response and plays a central role in a variety of biochemical processes. Peptide binding requires, in many cases, presentation of the peptides at interfaces, such as protein surfaces, cellular membranes, and synthetic polymer surfaces. We describe a novel molecular system in which interactions between antibodies and peptide epitopes displayed at a biomimetic membrane interface can be detected through induction of visible, rapid color transitions. The colorimetric assembly consists of a phospholipid/polydiacetylene matrix anchoring a hydrophobic peptide displaying the epitope at its N-terminus. The colorimetric transitions observed in the assembly, corresponding to perturbation of the polydiacetylene framework, are induced only upon recognition of the displayed epitope by its specific antibody present in the aqueous solution. Significantly, the color changes occur after a single mixing step, without further chemical reactions or enzymatic processing. The new molecular system could be utilized for studying antigen-antibody interactions and peptide-protein recognition, epitope mapping, and rapid screening of biological and chemical libraries.     

Unbinding Molecular Recognition Force Maps of Localized Single Receptor Molecules by Atomic Force Microscopy

Atomic force microscopy is a technique capable to study biological recognition processes at the single‐molecule level. In this work we operate the AFM in a force‐scan based mode, the jumping mode, where simultaneous topographic and tip–sample adhesion maps are acquired. This approach obtains the unbinding force between a well‐defined receptor molecule and a ligand attached to the AFM tip. The method is applied to the avidin–biotin system. In contrast with previous data, we obtain laterally resolved adhesion maps of avidin–biotin unbinding forces highly correlated with single avidin molecules in the corresponding topographic map. The scanning rate 250 pixel s^?1 (2 min for a 128×128 image) is limited by the hydrodynamic drag force. We are able to build a rupture‐force distribution histogram that corresponds to a single defined molecule. Furthermore, we find that due to the motility of the polymer used as spacer to anchor the ligand to the tip, its direction at rupture does not generally coincide with the normal to the tip–sample, this introduces an appreciable error in the measured force.     

Probing chain ends in adsorbed polymer layers

We study theoretically the pull-out of polymer chains from an adsorbed polymer layer by sticking of the chain ends on an opposing surface using scaling arguments and a mean field theory. When only one chain is pulled out from the layer, we extend previous results obtained for a single adsorbed chain and calculate the force necessary to extract the chain from the layer. We then discuss end adsorption from an adsorbed layer of polymers bearing specific end groups onto a second surface. Two bridging regimes are predicted: a diffuse layer regime at weak separations (or/and weak interaction) and a large separation strong interaction regime where the bridges stretch into a brush like structure. Bridging fractions and force profiles are displayed that could be compared to atomic force microscope or surface force apparatus experiments.     

Feeling Inter‐ or Intramolecular Interactions with the Polymer Chain as Probe: Recent Progress in SMFS Studies on Macromolecular Interactions

Single‐molecule force spectroscopy (SMFS) opens new avenues for elucidating the structures and functions of large coiled molecules such as synthetic and biopolymers at the single‐molecule level. In addition, some of the features in the force–extension curves (i.e. force spectra) are closely related to primary/secondary structures of the molecules being stretched. For example, the long force plateau in the DNA stretching curve is related to the double‐helix structure. These features can be regarded as the force fingerprints of individual macromolecules. These force fingerprints can therefore be used as indicators/criteria of single‐molecule manipulation during the measurement of some unknown intra‐ or intermolecular interactions. By comparing the force spectra of a single polymer chain before and after interaction with other molecules, the mode/strength of such molecular interactions can be derived. This Review focuses on recent advances in AFM‐based SMFS studies on molecular interactions in both synthetic and biopolymer systems using a single macromolecular chain as probe, including interactions between nucleic acids and proteins, mechanochemistry of covalent bonds, conformation‐regulated enzymatic reactions, adsorption and desorption of biopolymers on a flat surface or from the nanopore of a carbon nanotube, and polymer interactions in the condensed state.     

聚合物单分子力谱的研究进展

在单分子水平研究聚合物体系的分子内及分子间相互作用, 对于揭示其结构-性能的关系, 进而实现对相应功能的调控极为重要. 基于原子力显微镜技术(AFM)的单分子力谱, 由于其操作简单且适用面广, 在单分子研究领域得到了广泛的应用. 本文概括了该技术在生物高分子及合成高分子体系的研究进展. 对于生物高分子体系, 主要介绍了核酸(DNA/RNA)、 蛋白质和多糖(淀粉)的单分子力谱研究及利用各自力学指纹谱对其它分子间的相互作用的研究. 对于合成高分子体系, 主要介绍了聚合物的一级结构与单链弹性的关系及溶剂和聚集态结构等对高分子单链力学性质的影响规律.     

Surface-to-surface bridges formed by reversibly assembled polymers

Self-assembled polymers whose main chains are defined by reversible DNA base pairing form bridges between the tip of an atomic force microscope and substrate. The forces associated with the rupture of these assemblies are independent of polymer bridge length, and they resemble those expected for the isolated associations defining the polymer bridges. The assembly is reversible and is inhibited by a competitive, nonpolymerizing oligonucleotide. Noncomplementary polymer brush layers do not bridge, and therefore, the forces result from specific molecular recognition events. The length distribution of the bridges differs greatly from that of the polymers in solution, and thus the bridging is responsive to the spatial constraints of the environment.     

Collective and single-molecule interactions of alpha5beta1 integrins

A novel biomimetic system was used to study collective and single-molecule interactions of the alpha5beta1 receptor-GRGDSP ligand system with an atomic force microscope (AFM). Bioartificial membranes, which display peptides that mimic the cell adhesion domain of the extracellular matrix protein fibronectin, are constructed from peptide-amphiphiles. The interaction measured with the immobilized alpha5beta1 integrins and GRGDSP peptide-amphiphiles is specifically related to the integrin-peptide binding. It is affected by divalent cations in a way that accurately mimics the adhesion function of the alpha5beta1 receptor. The recognition of the immobilized receptor was significantly increased for a surface that presented both the primary recognition site (GRGDSP) and the synergy site (PHSRN) compared to the adhesion measured with surfaces that displayed only the GRGDSP peptide. At the collective level, the separation process of the receptor-ligand pairs is a combination of multiple unbinding and stretching events that can accurately be described by the wormlike chain (WLC) model of polymer elasticity. In contrast, stretching was not observed at the single-molecule level. The dissociation of single alpha5beta1-GRGDSP pairs under loading rates of 1-305 nN/s revealed the presence of two activation energy barriers in the unbinding process. The high-strength regime above 59 nN/s maps the inner barrier at a distance of 0.09 nm along the direction of the force. Below 59 nN/s a low-strength regime appears with an outer barrier at 2.77 nm and a much slower transition rate that defines the dissociation rate (off-rate) in the absence of force (k(off) degrees = 0.015 s(-1)).     

原子力显微镜研究聚丙烯酸的单链力学性质聚丙烯酸的单分子力谱

自从1986年发明原子力显微镜(AFM)以来,AFM已经发展成为应用最为广泛的扫描探针显微镜[1],它给材料科学家、化学家和生物学家提供了一个极为便利的研究手段.目前,原子力显微镜的空间分辨率已经达到原子尺度,同时又具有非常高的力的敏感性,可以探测10 pN的力,这就为研究单分子的性质提供了可能性[2,3].     

Nanoscience of single polymer chains revealed by nanofishing

The invention of atomic force microscopy (AFM) enabled us to study the statistical properties of single polymer chains by a method called "nanofishing," which stretches a single polymer chain adsorbed on a substrate with its one end by picking it at the other end. A force-extension curve obtained for a single polystyrene chain in a Theta solvent (cyclohexane) shows good agreement with a worm-like chain model and, therefore, gives microscopic information about entropic elasticity. Furthermore, the nanofishing technique can be used for dynamic viscoelastic measurement of single polymer chains. An AFM cantilever is mechanically oscillated at its resonant frequency during the stretching process. This technique enables the estimation of quantitative and simultaneous elongation-dependent changes of stiffness and viscosity of a single chain with the use of a phenomenological model. In this study, the effect of solvent on viscosity in low extension regions reveals that the viscosity is attributed to monomer-solvent friction. Thus, static and dynamic nanofishing techniques are shown to give powerful experimental proofs for several basic questions in polymer physics. The techniques are expected to reveal hidden properties of polymer chains or polymer solutions by any types of macroscopic measurements in the future.     

Investigating the Dynamic Viscoelasticity of Single Polymer Chains using Atomic Force Microscopy

In single‐molecule force spectroscopy (SMFS), many studies have focused on the elasticity and conformation of polymer chains, but little attention has been devoted to the dynamic properties of single polymer chains. In this study, we measured the energy dissipation and elastic properties of single polystyrene (PS) chains in toluene, methanol, and N,N‐dimethylformamide using a homemade piezo‐control and data acquisition system externally coupled to a commercial atomic force microscope (AFM), which provided more accurate information regarding the dynamic properties of the PS chains. We quantitatively measured the chain length‐dependent changes in the stiffness and viscosity of a single chain using a phenomenological model consistent with the theory of viscoelasticity for polymer chains in dilute solution. The effective viscosity of a polymer chain can be determined using the Kirkwood model, which is independent of the intrinsic viscosity of the solvent and dependent on the interaction between the polymer and solvent. The results indicated that the viscosity of a single PS chain is dominated by the interaction between the polymer and solvent. © 2019 Wiley Periodicals, Inc. J. Polym. Sci., Part B: Polym. Phys. 2019 , 57, 1736–1743     

Interactions of adsorbed poly(ethylene oxide) mushrooms with a bare silica-ionic liquid interface

The interaction of adsorbed poly(ethylene oxide) (PEO) mushrooms with clean silica-ethylammonium nitrate (EAN, a protic ionic liquid) interfaces is investigated using atomic force microscopy (AFM). 10 kDa, 35 kDa and 100 kDa PEO was used to prepare polymer layers ex situ by drop casting from 0.01 wt% EAN solutions. AFM tapping mode measurements of dried, solvent free PEO layers revealed oblate structures, which increase in size with molecular weight. Colloid probe force curve measurements of these surfaces re-solvated with EAN suggest PEO adopts a mushroom morphology, with the interaction range (layer thickness) increasing with molecular weight. Attractive forces on approach and single strand stretching forces on retraction show PEO has a strong affinity for the silica-EAN interface. The single polymer strand stretching forces follow the freely jointed chain model under good solvent conditions. Contour lengths close to the theoretical limits of 120 nm for the 10 kDa, 290 nm for the 35 kDa and 1240 nm for the 100 kDa PEO samples are observed, while fitted Kuhn lengths are small, at 0.14 nm.     

Extracting a single polyethylene oxide chain from a single crystal by a combination of atomic force microscopy imaging and single-molecule force spectroscopy: toward the investigation of molecular interactions in their condensed states

A thiol-labeled single polyethylene oxide chain has been pulled out of its single crystal and the corresponding extraction force obtained quantitatively by a good combination of atomic force microscopy (AFM) imaging and AFM-based single-molecule force spectroscopy (SMFS). Our study extends the AFM-based SMFS to the investigation of polymer interactions in their condensed states (e.g., in polymer single crystals).     

聚丙烯酸的单分子应力-应变行为

利用原子力显微镜的一种新方法 单分子力谱技术 研究了聚丙烯酸单链的弹性性质，得到了聚丙烯酸链的拉力与拉伸曲线．其拉力与拉伸曲线可以通过修改的Ｌａｎｇｅｖｉｎ方程进行较好地拟合．结果表明聚丙烯酸链的弹性性质与长度线性成比例，聚丙烯酸链具有相同的Ｋｕｈｎ长度（０６４±００５ｎｍ）和链段弹性系数（１３０００±２０００ｐＮ／ｎｍ），充分表明我们位伸的是聚丙烯酸的单链，所测得的拉力 拉伸行为是聚丙烯酸单链的弹性行为     

Controlling dispersion and migration of particulate additives with block copolymers and Diels-Alder chemistry

Reversible Diels-Alder chemistry was exploited to develop thermo-responsive polymer films. Here, low molecular weight poly(styrene) (PS) and poly(ethylene glycol) (PEG) were prepared with furyl and maleimido chain ends, respectively. These polymers were then tethered together to form a thiol-terminated PEG-b-PS diblock copolymer ligand via a Diels-Alder linkage and were employed to randomly disperse 10 nm diameter Au nanoparticles within a matrix of PEG. Thermal treatment caused the Diels-Alder linkages between the polymer blocks to be severed, resulting in controllable surface functionalization due to phase separation. Migration of the Au nanoparticles to the surface of the films was characterized by Rutherford backscattering spectroscopy, small-angle X-ray scattering, contact angle measurements, and atomic force microscopy.     

链段刚性对非溶剂致相分离成膜过程影响的耗散粒子动力学模拟

通过分子动力学(MD)模拟映射方法构建了符合聚醚砜(PES)刚性结构的耗散粒子动力学(DPD)简谐力场, 并研究了PES链段刚性对PES/N-甲基-2-吡咯烷酮(NMP)/水体系非溶剂致相分离(NIPS)过程的影响. 结果表明, 由于非溶剂和溶剂在两相界面上发生的质量交换, 导致在相界面处PES链段发生堆积, 形成了薄而致密的聚合物表层, 在PES溶液内部, 由于非溶剂的侵入导致体系发生了旋节相分离, 从而在整体上得到了明显的非对称结构; 同时, PES链段刚性的提升能够明显加快体系的相分离速度, 导致相界面处的PES薄层形成得更加快速, 薄层更加致密、 孔径更小, 而对内部的疏松结构影响较小; 此外, 结合不同力场下聚合物浓度对相分离过程的影响可以发现, 不同PES浓度下, 链段刚性的提升对相分离过程的特征和演变趋势没有造成根本性的影响, 与经典的弹簧力场的模拟结果在整体趋势上有相似性. 研究结果表明, 简谐力场能提升PES链段的刚性, 从而能更真实地模拟实际体系的非溶剂相分离法成膜过程.     

Recognition and assembly using protein “building blocks”

A new approach to materials design is presented, utilizing specific recognition and assembly of proteins at the molecular level. The approach exploits the control over polymer chain microstructure afforded by biosynthesis to produce protein-based materials with precisely defined physical properties. Incorporated into these materials are recognition elements that stringently control the placement and organization of each chain within higher order superstructures. The proteins, designated Recognin A2 through Recognin E2, are recombinant polypeptides designed de novo from both natural consensus sequences and an appreciation of the physical principles governing biological recognition. The synthesis and characterization of the protein recognition elements is briefly described and initial studies on self-assembly-recognition patterns using surface plasmon resonance and circular dichroism are presented. A subset of these materials are programmed to spontaneously assembly into complex, multicomponent structures and represent a first step in a rational approach to nanometer-scale structural design.