Synthesis of Enantiomerically Pure Bis(hydroxymethyl)-Branched Cyclohexenyl and Cyclohexyl Purines as Potential Inhibitors of HIV

The synthesis of the enantiomerically pure bis(hydroxymethyl)-branched cyclohexenyl and cyclohexyl purines is described. Racemic trans-4,5-bis(methoxycarbonyl)cyclohexene [(+/-)-6] was reduced with lithium aluminum hydride to give the racemic diol (+/-)-7. Resolution of (+/-)-7 via a transesterification process using lipase from Pseudomonas sp. (SAM-II) gave both diols in enantiomerically pure form. The enantiomerically pure diol (S,S)-7was benzoylated and epoxidized to give the epoxide 9. Treatment of the epoxide 9 with trimethylsilyl trifluoromethanesulfonate and 1,5-diazabicyclo[5.4.0]undec-5-ene followed by dilute hydrochloric acid gave (1R,4S,5R)-4,5-bis[(benzoyloxy)methyl]-1-hydroxycyclohex-2-ene (10). Acetylation of 10 gave (1R,4S,5R)-1-acetoxy-4,5-bis[(benzoyloxy)methyl]cyclohex-2-ene (11). (1R,4S,5R)-1-Acetoxy-4,5-bis[(benzoyloxy)methyl]cyclohex-2-ene (11) was converted to the adenine derivative 12 and guanine derivative 13 via palladium(0)-catalyzed coupling with adenine and 2-amino-6-chloropurine, respectively. Hydrogenation of 12 and 13 gave the correspondning saturated adenine derivative 14 and guanine derivative 15. (1R,4S,5R)-4,5-Bis[(benzoyloxy)methyl]-1-hydroxycyclohex-2-ene (10) was converted to the adenine derivative 16 and guanine derivative 17 via coupling with 6-chloropurine and 2-amino-6-chloropurine, respectively, using a modified Mitsunobu procedure. Hydrogenation of 16 and 17 gave the corresponding saturated adenine derivative 18 and guanine derivative 19. Compounds 12-19 were evaluated for activity against human immunodeficiency virus (HIV), but were found to be inactive. Further biological testings are underway.     

Nucleic acid related compounds. 116. Nonaqueous diazotization of aminopurine nucleosides. Mechanistic considerations and efficient procedures with tert-butyl nitrite or sodium nitrite

Nonaqueous diazotization-dediazoniation of two types of aminopurine nucleoside derivatives has been investigated. Treatment of 9-(2,3,5-tri-O-acetyl-beta-D-ribofuranosyl)-2-amino-6-chloropurine (1) with SbCl(3)/CH(2)Cl(2) was examined with benzyltriethylammonium (BTEA) chloride as a soluble halide source and tert-butyl nitrite (TBN) or sodium nitrite as the diazotization reagent. Optimized yields (>80%) of the 2,6-dichloropurine derivative were obtained with SbCl(3). Combinations with SbBr(3)/CH(2)Br(2) gave the 2-bromo-6-chloropurine product (>60%), and SbI(3)/CH(2)I(2)/THF gave the 2-iodo-6-chloropurine derivative (>45%). Antimony trihalide catalysis was highly beneficial. Mixed combinations (SbX(3)/CH(2)X'(2); X/X' = Br/Cl) gave mixtures of 2-(bromo, chloro, and hydro)-6-chloropurine derivatives that were dependent on reaction conditions. Addition of iodoacetic acid (IAA) resulted in diversion of purine radical species into a 2-iodo-6-chloropurine derivative with commensurate loss of other radical-derived products. This allowed evaluation of the efficiency of SbX(3)-promoted cation-derived dediazoniations relative to radical-derived reactions. Efficient conversions of adenosine, 2'-deoxyadenosine, and related adenine nucleosides into 6-halopurine derivatives of current interest were developed with analogous combinations.     

Copolymers containing alternating sequences of nucleic acid base pairs. II. Polymerization studies

The objective of this project was to utilize the alternating copolymerizability of electrondonor monomers with electron-acceptor monomers to selectively introduce nucleic acid bases into copolymers in a controlled sequence distribution. To this end, maleimide monomers containing the adenine, thymine, cytosine, and 6-chloropurine moieties were converted to their hompolymers. The homopolymer of 1-(vinyloxyethoxy)thymine was also prepared. Alternating copolymers of the adenine maleimide monomer and the corresponding 6-chloropurine maleimide monomer with 1-(vinyloxyethoxy)thymine were prepared. The latter copolymer was converted to the alternating adenine–thymine copolymer by reaction with ammonia. Characterization of the polymers and copolymers via spectroscopic methods and physical measurements confirm their proposed structures. Monomer syntheses and characterization, as well as studies designed to establish the extent and nature of adenine–thymine interactions in the copolymers, are reported in accompanying papers.     

Reactions of 6-hydrazino-, 6-hydroxylaminopurines and related derivatives

7H-Tetrazolo[5,1-i]purine was prepared by nitrosation of 6-hydrazinopurine and by reaction of 6-chloropurine with sodium azide; it was converted to adenine upon catalytic hydrogenation. 6-Hydroxylaminopurine was oxidized to 6-nitrosopurine with manganese dioxide, while alkaline treatment of the former gave 6,6′-azoxypurine. Nitrosation of 6-hydroxylaminopurine afforded 6-(N-nitroso)hydroxylaminopurine. Reaction of 6-chloropurine with 6-hydrazinopurine led to 6,6′-bisadenine; the corresponding ribosyl derivatives gave 6,6′-bisadenosine. Upon air oxidation, 6,6′-bisadenine was converted into 6,6′-azopurine. The related 6-thiosemicarbazino- and 6-(N-methyl)ureidopurine derivatives are also described. 6-N-(Nitroso)hydroxylaminopurine showed an inhibitory activity against several mouse tumors and leukemias.     

Unconventional nucleotide analogues—II Synthesis of the adenyl analogue of willardiine

The Michael addition of adenine (6a), 6-chloropurine (6b) and 2,6-dichloropurine (6c) to methyl -chloroacrylate gives high yields of the corresponding adducts (7a-7c). Hydrolysis and amination of 7a gave the adenyl analogue of Willardiine (2).     

A Photophysical Study of Purines and Theophylline by Using Laser-Induced Optoacoustic Spectroscopy

Abstract— The photophysics of purinic compounds (purine, 6-meth-ylpurine, 6-aminopurine [adenine], 6-chloropurine, 6-methoxypurine) and theophylline in acetonitrile solution were studied by pulsed laser-induced optoacoustic spectroscopy (LIOAS) exciting at 266 nm. The effect of O₂, Xe and MnCl₂ on the photophysical behavior of these compounds was studied; as well, the formation quantum yield of purine and 6-methylpurine triplet states were determined, with φ_T= 0.88 ± 0.03 for both compounds. Multiphotonic and depletion processes were observed at high laser fluences. In order to explain this behavior, theoretical UV-visible absorption electronic spectra from both the S₀ and S₁ state have been calculated for purines and theophylline by using the semiempirical PM3 and ZINDO/S methods.     

Synthesis of novel 9-aryl and heteroarylpurine derivatives via copper mediated coupling reaction

A series of 9-(hetero)arylpurine derivatives has been prepared through N-arylation of 6-chloropurine with boronic acids in the presence of copper(II) acetate. Screening reaction conditions in terms of bases and solvents led to the successful coupling of a series of sterically demanding (hetero)arylboronic acids, never described so far. The coupling products were next readily converted into the target adenine derivatives. The described procedure provides easy access to original fragments for screening applications. Moreover these 9-aryl-6-chloropurine derivatives might be useful as intermediates for the preparation of purine derivatives with potential biological properties.     

Efficient syntheses of 2-chloro-2'-deoxyadenosine (cladribine) from 2'-deoxyguanosine(1)

We report efficient syntheses of the clinical agent cladribine (2-chloro-2'-deoxyadenosine, CldAdo), which is the drug of choice against hairy-cell leukemia and other neoplasms, from 2'-deoxyguanosine. Treatment of 3',5'-di-O-acetyl- or benzoyl-2'-deoxyguanosine (1) with 2,4,6-triisopropyl- or 4-methylbenzenesulfonyl chloride gave high yields of the 6-O-arylsulfonyl derivatives 2 or 2'b. Deoxychlorination at C6 of 1 also proceeded to give the 2-amino-6-chloropurine derivative 5 in excellent yields. The nonaqueous diazotization/chloro dediazoniation (acetyl chloride/benzyltriethylammonium nitrite) of 2, 2'b, and 5 gave the 2-chloropurine derivatives 3, 3'b, and 6, respectively. The selective ammonolysis at C6 (arylsulfonate with 3 or chloride with 6) and accompanying deprotection of the sugar moiety gave CldAdo (64-75% overall yield from 1).     

Efficient N-arylation and N-alkenylation of the five DNA/RNA nucleobases

A general approach to N-arylation and N-alkenylation of all five DNA/RNA nucleobases at the nitrogen atom normally attached to the sugar moiety in DNA or RNA has been developed. Various protected or masked nucleobases engaged readily in the copper-mediated Chan-Lam-Evans-modified Ullmann condensation with a range of different boronic acids at room temperature and were subsequently converted to the corresponding deprotected or unmasked adducts. Different N(3)-protecting groups were examined in the case of thymine, where the benzoyl group afforded the highest yields. A 4-alkylthio-substituted pyrimidin-2(1H)-one served as both a cytosine and a uracil precursor and was N-arylated and N-alkenylated in high yields. Adenine was efficiently and selectively N-arylated and N-alkenylated at the N(9) position by employing a bis-Boc-protected adenine derivative, while a bis-Boc-protected 2-amino-6-chloropurine served as guanine precursor and could also be selectively N(9)-arylated and N(9)-alkenylated.     

Nucleosides. CXXXV. Synthesis of some 9-(2-deoxy-2-fluoro-beta-D-arabinofuranosyl)-9H-purines and their biological activities

Seven purine nucleosides containing the 2'-deoxy-2'-fluoro-beta-D-arabinofuranosyl moiety were synthesized and tested for their antitumor activity. Direct condensation of 3-O-acetyl-5-O-benzoyl-2-deoxy-2-fluoro-D-arabinofuranosyl bromide (1) with N6-benzoyladenine in CH2Cl2 followed by saponification of the product afforded the adenine nucleoside (I, 2'-F-ara-A). Deamination of I with NaNO2 in HOAc gave the hypoxanthine analogue (II, 2'-F-ara-H). The 6-thiopurine nucleoside (III, 2'-F-ara-6MP) was prepared by condensation of 1 with 6-chloropurine by the mercury procedure followed by thiourea treatment and saponification of the product. Methylation of III gave the 6-SCH3 analogue (IV). Raney Ni desulfurization of III afforded the unsubstituted purine nucleoside (V, 2'-F-ara-P). Condensation of 1 with 2-acetamido-6-chloropurine by the silyl procedure afforded the protected 2-acetamido-6-chloropurine nucleoside which served as the precursor for both the guanine and 6-thioguanine nucleosides (VI, 2'-F-ara-G and VII, 2'-F-ara-TG, respectively). Thus, alkaline hydrolysis of the precursor gave VI. Thiourea treatment prior to alkaline hydrolysis gave VII. The new nucleoside, 2'-F-ara-G (VI) is found to be selectively toxic to human T-cell leukemia CCRF-CEM.     

Regioselective alkylation of the exocyclic nitrogen of adenine and adenosine by the Mitsunobu reaction

A novel synthetic route to N⁶-substitution of adenine is presented, employing the Mitsunobu reaction as the key step. A range of primary and secondary alcohols all coupled in very good to excellent yields within 30 min at 45 °C, offering a milder alternative to the traditional nucleophilic aromatic substitution of 6-chloropurine. The utility of this protocol is further demonstrated by its application to the syntheses of N⁶,N⁹-di-substituted adenines, including the potent and selective A₁ adenosine receptor agonist N⁶-cyclopentyladenosine.     

Synthesis of Purine Antiviral Agents,Hypoxanthine and 6-Mercaptopurine

Some potentially biologically active 6-substituted purine derivatives have been synthesized from simple organic reagents. The reaction of urea with ethyl cyanoacetate gave 6-aminopyrimidine-2,4-dione which was converted in two steps into purine derivative, xanthine. The latter was treated with formamide at 200°C to obtain hypoxanthine. The chlorination of hypoxanthine with POCl₃ gave 6-chloropurine which was converted into 6-mercaptopurine via reaction with thiourea in acetonitrile, followed by treatment with boiling ethanol. ethanol.     

Total synthesis of spicamycin amino nucleoside

[formula: see text] The first total synthesis of spicamycin amino nucleoside 2 has been achieved. The aminoheptose unit 5 was prepared stereoselectively from myo-inositol, and the characteristic N-glycoside linkage was constructed by way of Pd-catalyzed coupling reaction of 5 with 6-chloropurine derivative 6.     

Radical-mediated stannylation of vinyl sulfones: access to novel 4′-modified neplanocin A analogues

Synthesis of 4′-substituted (halogeno, phenyl, ethynyl, and cyano) neplanocin A analogues was carried out. A cyclopentenol derivative having a vinylstannane structure was designed as key-intermediate in this study, which was prepared based on radical-mediated sulfur-extrusive stannylation. The resulting stannylated cyclopentenol 15 was successfully condensed with 6-chloropurine through the Mitsunobu reaction, leading to the carbocyclic nucleoside 20. Compound 20 was converted to its adenine counterpart 21 by treatment with NH₃/MeOH, during which the 4′-stannyl group remained intact. The title compounds were prepared by using 21 or the 4′-iodo derivative (22) mostly through the Stille reaction.     

Synthesis of novel azanorbornylpurine derivatives

Azanorbornylpurine derivatives were prepared by Mitsunobu reaction of appropriate hydroxyazanorbornane derivative with 6-chloropurine or construction of purine base at azanorbornylamines. The prepared target compounds were evaluated for antiviral activity and effect on neuronal and muscle nicotinic acetylcholine receptors.     

Conformationally constrained purine mimics. Incorporation of adenine and guanine into spirocyclic nucleosides

Directed syntheses of spirocyclic nucleosides featuring adenine and guanine as the nucleobases have been successfully developed. The key starting materials are the enantiomerically pure spiro lactones 4, 15, and 28, which have proven amenable to conversion to anomeric mixtures of chloro sugars. The latter can enter into glycosidation by SN2 displacement with the sodium salts of 6-chloropurine or 2-amino-6-chloropurine. In the saturated series, the chromatographic separation of 18 from 19 was possible. Where 33 and 34 are concerned, their relatively rapid rate of epimerization precluded this. Mimics 35-37 resisted isolation as pure anomers. The configurational assignments are based on the thermal interconversions and supporting MM3 steric energy calculations. Added corroboration was gained from a crystallographic analysis of 8. Although removal of the TBS protecting groups in all late-stage guanine intermediates proved to be problematical, the pair of hydroxyl groups in 37 could be introduced by proper recourse to the oxidation of 36 with ruthenium tetraoxide.     

Preparation of a fully substituted purine library

A library of tetra-substituted purine analogues was readily prepared via parallel synthesis. This strategy relies on a key cyclization of a 4,5-diaminopyrimidine with either a carboxylic acid or its derivative to construct the 2,8,9-trisubstituted 6-chloropurine core. Further elaborations of this core allow the introduction of other diversity points. This methodology is demonstrated through the preparation of a 135-membered library of tetra-substituted purines in good yields and high purity.     

Synthesis of new 6-substituted purinyl-5′-nor-1′-homocarbanucleosides based on indanol

A series of new 6-substituted purinyl-5′-nor-1′-homocarbanucleosides based on indanol were synthesized from (±)-cis-3-hydroxymethyl-1-indanol, an appropriately functionalized derivative of which was reacted with 6-chloropurine in the presence of NaH and 18-crown-6 ether to prepare a key intermediate that gave access to the target molecules, purinylcarbanucleosides in which position 6 is occupied by a chloro, hydroxy, methoxy, amino or substituted phenyl group.     

The ring opening of cyclopentene oxides by pyrimidines and purines as a pathway to carbocyclic nucleoside analogues

Summary Various carbocyclic nucleosides withxylo-configuration have been synthesized using ring opening of 5-O-acetyl-1,2-anhydro-3-O-benzylcarba--DL-xylo-pentofuranose (6) by thymine, uracil, 4-N-benzoylcytosine, adenine, 6-N-benzoyladenine, and 2-amino-6-chloropurine in alkaline medium. For this purpose, the use of triethylaluminum is introduced into carbanucleoside chemistry. The new method proved to be superior over the application of sodium hydride and potassium or caesium carbonate.

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Ringöffnung von Cyclopentenoxiden mit Pyrimidinen und Purinen als Syntheseweg zu carbocyclischen Nucleosidanalogen

Zusammenfassung Ringöffnung von 5-O-Acetyl-1,2-anhydro-3-O-benzylcarba--DL-xylo-pentofuranose (6) mit Thymin, Uracil, 4-N-Benzoylcytosin, Adenin, 6-N-Benzoyladenin und 2-Amino-6-chlorpurin in alkalischem Medium ergab die entsprechendenxylo-konfigurierten carbocyclischen Nucleoside. Als Hilfsbase wurde Triethylaluminium verwendet, was deutliche Vorteile gegenüber der Verwendung von Natriumhydrid und Kalium- oder Cäsiumcarbonat bezüglich Produktreinheit und Ausbeute bietet.

     

Purine N-oxides: XXXVII. Derivatives from 6-chloropurine 3-oxide

Interaction of 6-chloropurine 3-oxide with several amines led to 6-substituted purine 3-oxides. 6-Chloropurine 3-oxide and selenourea gave 6-selenopurine 3-oxide. 6-Mereaptopurine 3-oxide, prepared from the 6-chloro derivative and ammonium dithioearbonate, was transformed with chlorine and hydrogen fluoride into 6-purinesulfonyl fluoride 3-oxide which upon ammonolysis afforded purine-6-sulfonamide 3-oxide. Methanelhiol and 6-ehloropurint: 3-oxide yielded the known 6-methylthiopurine 3-oxide, which by treatment with chlorine was oxidized to 6-methyl-sulfonylpurine 3-oxide. Reaction of the latter with hydroxylamine led to an improved synthesis of 6-hydroxylaminopurine 3-oxide, which by interaction with manganese dioxide was transformed into 6-nitrosopurine 3-oxide.