Two-dimensional self-assembly of linear molecular rods at the liquid/solid interface

We report on the synthesis and scanning tunneling microscopy (STM) studies of a series of linear molecular rods (1-5) comprising different numbers and/or spatial arrangements of perfluorinated benzene and benzene subunits interlinked with diacetylenes in the para position and decorated with or without terminal dodecyl chains. The molecules organize themselves into well-ordered 2D crystal structures at the liquid/solid interface through intermolecular and molecule-substrate interactions. Whereas the molecules substituted by dodecyl chains form the lamellar structures with alternating rigid core rows and alkyl chain rows, the unsubstituted ones change the orientation of the rigid backbones with respect to the lamellar axis. The molecular arrangement is not influenced by fluoro substituents on any phenyl ring of the backbone, which suggests that the interactions between the π-conjugated backbones are dominated by close packing rather than by the dipole moments of the rods or fluorine-based intermolecular interactions.     

The crystalline and liquid crystalline structures of benzyl-tri-octadecylammonium bromide complete the puzzle: how do Group VA halide salts with one-four long n-alkyl chains pack?

The first single crystal structure of a Group VA halide salt with three equivalent long n-alkyl chains, benzyltrioctadecylammonium bromide (BzN18Br), is reported. It consists of alternating interdigitated and non-interdigitated regions of alkyl chains separated by ionic planes. Two chains per molecule are paired and extend to one side in a non-interdigitated region. The third chain is on the opposite side of the ionic plane and pairs intermolecularly to form an adjacent, interdigitated region. The thickness of two nearly extended molecules defines the bilayer unit-two ionic planes flanked by a region with intramolecularly paired chains and separated by an interdigitated chain region. Powder X-ray diffraction and optical microscopy data of liquid crystalline BzN18Br are consistent with an enantiotropic smectic A₂ (SmA₂) phase: the three n-alkyl chains of each molecule are projected from one side of an ionic plane, and head groups of neighbouring molecules are oriented head-to-head, in a non-interdigitated bilayer assembly. The structure of BzN18Br fills an important gap in our knowledge about the crystal packing of ammonium and phosphonium salts with one-four equivalent long n-alkyl chains. A comparison of their packing arrangements is made and the transitional nature of the BzN18Br structures is demonstrated. Although salts with one, two, or three long n-alkyl chains form SmA₂ phases, each is distinctive in its molecular packing. A large molecular reorganization accompanies the crystal-to-liquid crystal transition of BzN18Br.     

Architecture of the hydrophobic and hydrophilic layers as found from crystal structure analysis of N-benzyl-N,N-dimethylalkylammonium bromides

The molecular and crystal structures of N-benzyl-N,N-dimethylalkylammonium bromides monohydrates with chain length n=8-10 have been determined. The crystals are isostructural with the N-benzyl-N,N-dimethyldodecylammonium bromide monohydrate. The structures consist of alternated hydrophobic and hydrophilic layers perpendicular to [001]. The attraction between N+ of the cation head-groups and Br- anions is achieved through weak C_H...Br interactions. The water molecules incorporated into ionic layers are donors for two O_H...Br hydrogen bonds and serve as the acceptors in two weak interactions of C_H...O type. The methylene chains, with the slightly curved general shape, have the extended all-trans conformation. The mutual packing of the chains in the hydrophobic layers is governed by weak C_H...pi interactions.     

Engineering solid-state morphologies in carbazole-ethynylene macrocycles

We present a crystallographic study that systematically investigates the effects of the n-alkyl side-chain length on the crystal packing in shape-persistent macrocycles. The solid-state packing of carbazole-ethynylene-containing macrocycles is sensitive to the alkyl-chain length. In macrocycles containing n-alkyl side chains up to nine carbons in length, face-on aromatic π interactions predominate, while the addition of one carbon leads to a completely different packing arrangement. Macrocycles with C(10) or C(11) chains exhibit a novel packing motif wherein the alkyl chains intercalate between macrocycles, leading in one case to continuous solvent-filled channels. When crystals of the C(10) macrocycle are bathed in solvent, the included molecules exchange with the external solvent, and the alkyl chain disorder changes in response to changes in the guest volume in order to retain crystallinity. Powder X-ray diffraction data indicate that alkyl-macrocycle interactions in the longer chains "emulate" the distances typical of face-to-face π interactions, leading to deceptive indicators of π stacking.     

Crystal structures of 4-cyano-4-hexylbiphenyl (6CB) and 4-cyano-4-heptylbiphenyl (7CB) in relation to odd-even effects

Crystal structures of 4-cyano-4-hexylbiphenyl (6CB) and 4-cyano-4-heptylbiphenyl (7CB) with low melting points (13.5 and 30 C, respectively) have been determined at 73 and 33 C, respectively, and compared with previously reported structures of other homologues (n = 2-5, 8-11). In the crystal of 7CB, chains and cores stack alternately, where core regions are largely overlapped with distances of 3.575(2) and 3.597(2)A for N (in CN)... C (in phenyl), showing almost the same packing mode as those of 9CB and 11CB. In the crystal of 6CB, CN groups are antiparallel between neighbouring molecules though the interatomic distances are much longer N ... C, 3.673(3) and 3.563(3)A than in 8CB and 10CB (3.28-3.43A), resulting in a quite different packing mode from those of 8CB and 10CB, which had been found to be similar, with CN-CN interactions. Systematic comparison of the homologous series (n = 2-11) reveals odd-even effects, CN-phenyl and CN-CN interactions for odd and even members, respectively, in the crystal structures, except for 5CB and 6CB.     

Growth and structure of surface-initiated poly(n-alkylnorbornene) films

We report the surface-initiated growth of poly(alkylnorbornene) films via ring-opening metathesis polymerization (ROMP). The films are grown by exposure of a vinyl-terminated self-assembled monolayer (SAM) on gold to Grubbs first-generation catalyst and the subsequent exposure to an alkylnorbornene monomer. We investigate the influence of alkyl side chains on the structure, barrier, surface properties, and the growth kinetics of surface-initiated ROMP-type poly(norbornene) films. Rate constants for film growth are estimated for the comparison of monomer reactivity. The rate constant for film growth decreases by 3 orders of magnitude from norbornene to decylnorbornene, indicating a strong effect of chain length on initiation and/or propagation rates. Reflectance-absorption infrared spectroscopy is used to show the molecular level packing within the poly(alkylnorbornene) films is disrupted by the alkyl side chains. Tapping-mode atomic force microscopy is used to show that norbornene, butylnorbornene, and hexylnorbornene polymerize from the surface to form dense coatings, whereas decylnorbornene polymerizes to form isolated polymer clusters. The methyl terminus of the alkyl side chains increases the hydrophobicity of the poly(alkylnorbornene) films (thetaA(H2O) = 109-114 degrees) beyond that of a typical poly(norbornene) film (thetaA(H2O) approximately 106 degrees). The additional hydrophobicity throughout the film correlates with superior resistances against redox probes (Rf approximately 105 Omega.cm2) for poly(hexylnorbornene) when compared to polynorbornene (Rf approximately 104 Omega.cm2). The resistance of the poly(decylnorbornene) film (Rf approximately 102 Omega.cm2) is consistent with its nonuniform, cluster-like morphology.     

Langmuir-Blodgett films as aligning layers for homeotropic alignment of liquid crystal molecules

The first single crystal structure of a Group VA halide salt with three equivalent long n-alkyl chains, benzyltrioctadecylammonium bromide (BzN18Br), is reported. It consists of alternating interdigitated and non-interdigitated regions of alkyl chains separated by ionic planes. Two chains per molecule are paired and extend to one side in a non-interdigitated region. The third chain is on the opposite side of the ionic plane and pairs intermolecularly to form an adjacent, interdigitated region. The thickness of two nearly extended molecules defines the bilayer unit-two ionic planes flanked by a region with intramolecularly paired chains and separated by an interdigitated chain region. Powder X-ray diffraction and optical microscopy data of liquid crystalline BzN18Br are consistent with an enantiotropic smectic A₂ (SmA₂) phase: the three n-alkyl chains of each molecule are projected from one side of an ionic plane, and head groups of neighbouring molecules are oriented head-to-head, in a non-interdigitated bilayer assembly. The structure of BzN18Br fills an important gap in our knowledge about the crystal packing of ammonium and phosphonium salts with one-four equivalent long n-alkyl chains. A comparison of their packing arrangements is made and the transitional nature of the BzN18Br structures is demonstrated. Although salts with one, two, or three long n-alkyl chains form SmA₂ phases, each is distinctive in its molecular packing. A large molecular reorganization accompanies the crystal-to-liquid crystal transition of BzN18Br.     

N-烷基化聚对苯二甲酰对苯二胺梳状高分子中烷基侧链对刚性主链堆积行为的影响

基于聚对苯二甲酰对苯二胺(PPTA), 采用N-烷基化方法制备了系列PPTACns(烷基侧链碳原子数n=8, 10, 12, 14, 16, 18)刚性主链梳状高分子, 利用DSC, XRD和FTIR等方法研究了其主链堆积行为、 分子链构象及热性能等与烷基侧链长度及结晶特性之间的关系. XRD和DSC结果表明, 当烷基侧链碳原子数达到14时, 烷基侧链发生结晶. XRD结果显示, PPTACns具有层状结构, 烷基侧链长度对主链层间距影响显著. FTIR研究发现, 烷基侧链的聚集状态对PPTACns分子链的构象产生较大影响, 伴随着烷基侧链结晶的熔融, PPTACns的分子链构象发生显著改变. 烷基侧链处于熔融状态的PPTACns的ν_C=O和γ_C-H谱带峰位与烷基侧链不结晶的PPTACn接近.     

Effect of n-alkyl and sulfonyl groups on the wetting properties of comblike poly(oxyethylene)s and stick-slip behavior

The influence of side chain length and sulfonyl moiety on the molecular structures and wettability behavior of poly(oxyethylene)s with alkyl sulfonyl side chains (CH(3)-nSE, n = 1, 2, 3, 4, 5, 6, 8, 10), where n is the number of the carbon atom in the n-alkyl side group, was investigated. CH(3)-nSEs having shorter side chains (n < 5) do not have ordered structures, and their surfaces were found to be more polar than those of CH(3)-nSEs having longer side chains (n ≥ 5). The CH(3)-nSEs having longer side chains show double-layered lamellar structures (n ≥ 5) with well-aligned side chains and low surface energies in the range 21.2-25.8 mN/m. Interestingly, stick-slip behavior was observed only on the surfaces of CH(3)-3SE and CH(3)-4SE when water was used as the test liquid. The surface deformation at the three-phase line was generated from interactions between water and sulfonyl groups, and the optimum side chain lengths were believed to cause the stick-slip behavior.     

Carboxylate‐Driven Supramolecular Assemblies of Protonated meso‐Aryl‐Substituted Dipyrrolylpyrazoles

Dipyrrolylpyrazole (dpp) derivatives possessing an aryl ring at the pyrazole 4‐position were synthesized. Upon protonation, modified dpp derivatives formed a variety of assembled structures through complexation with carboxylates, as observed by single‐crystal X‐ray and synchrotron XRD analyses. In particular, the complexation of protonated dpp species possessing long alkyl chains with dicarboxylates resulted in highly ordered assembled structures, the packing modes of which as lamellar structures were controlled by the lengths of the spacer units between two carboxylate moieties. The charge‐carrier transporting properties of the solid materials were also controlled by bound anions, including dicarboxylates.     

新型偶氮苯硫醇衍生物自组装膜的制备与结构表征

自组装单分子膜(ＳＡＭｓ)是近年来引起广泛注意的一种稳定的、二维有序的、致密的有机超薄膜体系,由于其优越的性能,在润滑、吸附、防腐、电化学及微电子等领域中显示出广阔的应用前景[1～4].自组装单分子膜是使用含有各种活性官能团(如-ＣＯＯＨ,-ＳＨ,-Ｓ-Ｓ-,-ＯＨ,-ＣＮ等)的分子,以化学键的形式与相应的基底(如Ａｕ,Ａｇ,Ｃｕ,Ｐｔ,Ｓｉ,Ｍｉｃａ等)相互作用从而自发地形成自组装膜.根据不同的研究或应用目的合理设计组装分子的结构及基底表面,从而得到具有所需功能的自组装单分子膜是近年来界面科学和材料科学等领域研究的热点之一.…     

A series of long-chain lamellar hydrated copper(II) alkylsulfonates with different chain molecular assemblies

Reaction of copper(II) salts with n-alkylsulfonate anions yields light blue lamellar Cu(C(n)H(2n + 1)SO3)2 x zH2O displaying distinct (mono/bi-layer) chain packing with increasing alkyl chain lengths. This may be attributed to the amphiphilic nature of the surfactants, i.e., the hydrophilic sulfonate head groups, mediating the coordination, and H-bonding interactions, and the hydrophobic alkyl chains.     

Organic hydrogen-bonded assembly of asymmetric phenol amide molecules

The significant involvement of weak intermolecular interactions and steric and/or symmetry-related packing features was assessed with supramolecular arrays of 4-hydroxyphenyl amides in the crystal structure. The one-dimensional chain is observed in the aryl substituted 4-hydroxyphenyl amides, while alkyl analogs generate 2D or 3D arrays. A comparison of supramolecular assemblies in the similar 4-hydroxyphenyl amide compounds in the Cambridge Structural Database has been presented. It is correlated with the different steric constraints of aryl and alkyl groups to create chains, 2D sheets and 3D-interpenetrated networks in the asymmetric 4-hydroxyphenyl amides. A comprehensive analysis of crystal packing and energy features of the selected 4-hydroxyphenyl amide derivatives is reported.     

新型偶氮苯硫醇衍生物自组装膜的制备与结构表征

Self Assembled Monolayers(SAMs) of a series of mercapto contained azobenzene derivatives with the structure of CnH2n+1AzoO(CH 2)mSH (where n =4,6,8,10,12; with m =3,5 respectively) were prepared and characterized. Wettability measurement of water on the SAMs demonstrates that molecular packing density in the monolayers increases while the alkyl chain in the molecules is lengthened. Both the n and m values have similar contribution to the wetting property of SAMs. The RA IR spectra reveal that the alkyl chains in the SAMs tilt away dramatically from the surface normal direction with the increase in their length. However, the orientation of azobenzene moiety is found to be influenced slightly by the alkyl chain length, which is due to the tenderness of the molecule.     

Structural, odd-even chain alternation and thermal investigation of a homologous series of anhydrous silver(I) n-alkanoates

Molecular and lattice structures of a homologous series (n(c) = 8-20, inclusive) of silver (I) n-alkanoates are determined from X-ray Powder Diffraction, Solid State spin decoupled (13)C-NMR and variable temperature Fourier Transform Infrared Spectroscopies. The compounds crystallize in a monoclinic crystal system with hydrocarbon chains in the fully extended all-trans conformation. Moreover, the chains are tilted ca. 75° with respect to the metal basal plane and are arranged as methyl(tail)-to-methyl(tail) bilayers within a lamellar. The methyl chain ends, from different layers in the bilayer, do not overlap but are in such close proximity to cause methyl-methyl interactions. In a molecule, two carboxylate groups bind in a syn-syn type bridging bidentate mode to two silver atoms to form an eight-membered structure. Intramolecular silver-silver and intermolecular Ag-O-Ag interactions stabilize the head group and promote the formation of layer type polymeric sheets. Though the compounds are nearly isostructural, odd-even chain alternation is observed in density, anti-symmetric stretching vibrations of methyl and unusually, carboxylate (head) groups, as a result of packing differences of hydrocarbon chains within the crystal lattice. These arise from the relative vertical distances between polymeric sheets, which are not in the same plane. Thus, for odd chain length compounds, where those distances are less than for even chains, more ordered packing and hence higher densities are observed for these adducts. Also, the numbers and natures of the thermotropic phase transitions are chain length dependent and irreversible.     

Fabrication of positively charged catanionic vesicles from ion pair amphiphile with double-chained cationic surfactant

In this study, a pseudodouble-chained ion pair amphiphile, hexadecyltrimethylammonium-dodecylsulfate (HTMA-DS), was prepared from a mixture of cationic surfactant, hexadecyltrimethylammonium bromide, and anionic surfactant, sodium dodecylsulfate. Positively charged catanionic vesicles were then successfully fabricated from HTMA-DS with the addition of cationic surfactants, dialkyldimethylammonium bromide (DXDAB), including ditetradecyldimethylammonium bromide (DTDAB), dihexadecyldimethylammonium bromide, and dioctadecyldimethylammonium bromide (DODAB), with a mechanical disruption approach. The control of charge characteristic and physical stability of the catanionic vesicles through the variations of DXDAB molar fraction and alkyl chain length was then explored by size, zeta potential, and Fourier transform infrared analyses. It was found that the molecular packing and/or molecular interaction of HTMA-DS with DXDAB rather than the electrostatic repulsion between the charged vesicles dominated the physical stability of the mixed HTMA-DS/DXDAB vesicles. The presence of DTDAB, which possesses short alkyl chains, could adjust the packing of the unmatched chains of HTMA⁺ and DS^? and promote the vesicle formation. However, the weak molecular interaction due to the short chains of DTDA⁺ could not maintain the vesicle structures in long-term storage. With increasing the alkyl chain length of DXDAB, it was possible to improve the vesicle physical stability through the enhanced molecular interaction in the vesicular bilayer. However, the long alkyl chains of DODAB unmatched with those of HTMA-DS, resulting in the vesicle disintegration in long-term storage. For the formation of stable charged catanionic vesicles of HTMA-DS/DXDAB, a good match in hydrophobic chains and strong molecular interaction were preferred for the vesicle-forming molecules.     

Self-assembly of designed oligomeric siloxanes with alkyl chains into silica-based hybrid mesostructures

A novel self-assembly route to ordered silica-organic hybrids using well-defined siloxane oligomers with alkoxy functionality and covalently attached alkyl chains has been investigated. Various hybrid mesostructures were obtained by hydrolysis and polycondensation without the use of any structure-directing agents. The oligomers 1(Cn), having an alkylsilane core and three branched trimethoxysilyl groups, formed highly ordered lamellar phases when n = 14-18, while those with shorter alkyl chains formed cylindrical assemblies, slightly distorted two-dimensional (2D) hexagonal structures (n = 6-10), and a novel 2D monoclinic structure (n = 12). Furthermore, the mixtures of 1(Cn) with different chain lengths yielded well-ordered 2D hexagonal phases, possibly due to the better packing of the precursors. The hybrids consisting of cylindrical assemblies were converted to ordered porous silica with tunable pore sizes upon calcination to remove organic groups. The liquid-state 29Si NMR analysis of the hydrolysis and polycondensation processes of 1(Cn) revealed a unique intramolecular reaction yielding primarily the oligomer with a tetrasiloxane ring which is a new class of amphiphilic molecule having both self-assembling ability and high cross-linking ability. We also found that the mesostructure (lamellar or 2D hexagonal) was strictly controlled by varying the number of siloxane units per alkyl chain. These results provide a deeper understanding of the present self-assembly process that is strongly governed by the molecular packing of oligosiloxane precursors.     

Synthesis, self-assembling properties, and atom transfer radical polymerization of an alkylated L-phenylalanine-derived monomeric organogel from silica: a new approach to prepare packing materials for high-performance liquid chromatography

The monomer N'-octadecyl-N(alpha)-(4-vinyl)-benzoyl-L-phenylalanineamide (4) based on L-phenylalanine has been simply but effectively synthesized, and its self-assembling properties have been investigated. FTIR and a variable-temperature (1)H NMR spectroscopic investigation demonstrated that the aggregation of compound 4 in various organic solvents is due to the formation of intermolecular hydrogen bonds among the amide moieties. UV/Vis measurements indicated that the multiple pi-pi interactions of the phenyl groups also contribute to the self-assembly. As was observed by (13)C cross-polarization magic-angle spinning (CP/MAS) NMR and variable-temperature (1)H NMR measurements, the ordered alkyl chains also played an important role in the molecular aggregation by van der Waals interactions. Compound 4 was polymerized by surface-initiated atom transfer radical polymerization from porous silica gel to prepare a packing material for HPLC. The results of thermogravimetric analysis showed that a relatively large amount of polymer was grafted onto the silica surface. The organic phase on silica was in a noncrystalline solid form in which the long alkyl chain exists in a less-ordered gauche conformation. Analysis of chromatographic performance for polyaromatic hydrocarbon samples showed higher selectivity than conventional reversed-phase HPLC packing materials.     

Structures of the high-temperature solid phases of the odd-numbered fatty acids from tridecanoic acid to tricosanoic acid

Crystal structures of the high-temperature phases of odd-numbered fatty acids (C(n)H(2n-1)OOH) from tridecanoic acid (C(13)H(25)OOH) to tricosanoic acid (C(23)H(45)OOH) are presented in this article. They have been determined from high-quality X-ray powder-diffraction patterns. Two types of high-temperature phases are adopted: one monoclinic A2/a with Z=8 for the fatty acids with n=13 and n=15, denoted as C', and one monoclinic P2(1)/a with Z=4 for the longer-chain fatty acids, denoted as C'. It appears that the packing arrangement of the alkyl chains and of the carboxyl groups is similar in all of the structures. However, the arrangement at the methyl-group interface differs between the C' and C' forms. A survey of the intermolecular interactions involved in these polymorphs coupled with a study of the effects of temperature on the structures have led us to a better understanding of the arrangement of the molecules within the high-temperature solid phases of odd-numbered fatty acids.     

Structural and spectroscopic characterization of Cu(salen) complexes bearing long alkoxy chains

Cu(II) salen (salen?=?N,N′-ethylene-bis(salicylideneimine)) complexes bearing alkoxy chains of C₁₂ (1) and C₁₀ (2) in the salicylidene moieties were synthesized and subsequently characterized by several independent methods: single crystal X-ray diffraction, infrared spectroscopy, mass spectrometry, and UV-Vis spectroscopy. The solid state structures show that the spatial orientation and packing of the complexes are not affected by the alkyl chain length but by a coordinated solvent molecule, as demonstrated by the structure of 1 having methanol in an axial position.