Stable Prenucleation Calcium Carbonate Clusters Define Liquid–Liquid Phase Separation

Liquid–liquid phase separation (LLPS) is an intermediate step during the precipitation of calcium carbonate, and is assumed to play a key role in biomineralization processes. Here, we have developed a model where ion association thermodynamics in homogeneous phases determine the liquid–liquid miscibility gap of the aqueous calcium carbonate system, verified experimentally using potentiometric titrations, and kinetic studies based on stopped‐flow ATR‐FTIR spectroscopy. The proposed mechanism explains the variable solubilities of solid amorphous calcium carbonates, reconciling previously inconsistent literature values. Accounting for liquid–liquid amorphous polymorphism, the model also provides clues to the mechanism of polymorph selection. It is general and should be tested for systems other than calcium carbonate to provide a new perspective on the physical chemistry of LLPS mechanisms based on stable prenucleation clusters rather than un‐/metastable fluctuations in biomineralization, and beyond.     

Particle formation: Clusters and nuclei

The study of fine particles is a growing area of interest in both the academic and industrial communities. Through investigation of the formation and properties of clusters one can elucidate mechanisms of nucleation and investigate the changing properties of matter as it transcends from gas-like through surface dominated and ultimately to bulk state behavior. This paper provides an overview of the importance of the field and shows examples of how research on small clusters is providing insight into diverse phenomena such as nucleation, changing electronic properties with cluster size, and concomitant influences on reactions.     

氟化钾团簇的相变、成核和重结晶的分子动力学模拟

我们利用Born-Mayer-Huggins相互作用势函数对(KF)_N(N=108，256，500和864)团簇进行了分子动力学(MD)模拟。为了避免周期性边界条件对相变、成核和重结晶的干扰作用，对体系采用了自由边界。基于MD模拟结果，对团簇的熔化温度、熔化焓、扩散系数、成核速率、固液界面自由能、临界核大小等进行了计算和讨论。在对(KF)₈₆₄双晶团簇的热退火模拟中，观察到了固态的重结晶和晶粒的生长。经典的成核理论成功地解释了(KF)₈₆₄双晶团簇的重结晶MD模拟结果。     

Alignment of Amorphous Iron Oxide Clusters: A Non‐Classical Mechanism for Magnetite Formation

Despite numerous studies on the nucleation and crystallization of iron (oxyhydr)oxides, the roles of species developing during the early stages, especially primary clusters and intermediate amorphous particles, are still poorly understood. Herein, both ligand‐free and ligand‐protected amorphous iron oxide (AIO) clusters (<2 nm) were synthesized as precursors for magnetite formation. Thermal annealing can crystallize the clusters into magnetite particles, and AIO bulk phases with domains of pre‐aligned clusters are found to be direct precursors to crystals, suggesting a non‐classical aggregation‐based pathway that differs from the reported oriented attachment or particle accretion mechanisms.     

A new perspective of shape recognition to discover the phase transition of finite‐size clusters

An ultrafast shape‐recognition technique was used to analyze the phase transition of finite‐size clusters, which, according to our research, has not yet been accomplished. The shape of clusters is the unique property that distinguishes clusters from bulk systems and is comprehensive and natural for structural analysis. In this study, an isothermal molecular dynamics simulation was performed to generate a structural database for shape recognition of Ag? Cu metallic clusters using empirical many‐body potential. The probability contour of the shape similarity exhibits the characteristics of both the specific heat and Lindemann index (bond‐length fluctuation) of clusters. Moreover, our implementation of the substructure to the probability of shapes provides a detailed observation of the atom/shell‐resolved analysis, and the behaviors of the clusters were reconstructed based on the statistical information. The method is efficient, flexible, and applicable in any type of finite‐size system, including polymers and nanostructures. © 2014 Wiley Periodicals, Inc.     

Biocatalytic Feedback‐Controlled Non‐Newtonian Fluids

Non‐Newtonian fluids are ubiquitous in daily life and industrial applications. Herein, we report an intelligent fluidic system integrating two distinct non‐Newtonian rheological properties mediated by an autocatalytic enzyme reaction. Associative polyelectrolytes bearing a small amount of ionic and alkyl groups are engineered: by carefully balancing the charge density and the hydrophobic effect, the polymer solutions demonstrate a unique shear thickening property at low pH while shear thinning at high pH. The urea‐urease clock reaction is utilized to program a feedback‐induced pH change, leading to a strong upturn of the nonlinear viscoelastic properties. As long as the chemical fuel is supplied, two distinct non‐Newtonian states can be achieved with a tunable lifetime span. As a proof of concept, we demonstrate how the physical energy‐driven nonequilibrium properties can be manipulated by a chemical‐fueled process.     

Structure and Transformation in Clusters: Computational Experiments

A very brief review of gas-phase electron diffraction and one of its offshoots is given. Parallels are drawn between experimental studies of molecules, including conformational changes, and studies of clusters, including phase changes, calling particular attention to the use of computers as the preferred experimental apparatus. A sketch is presented of what has been learned about matter in transition by the application of computer simulations.     

The Prenucleation Equilibrium of the Parathyroid Hormone Determines the Critical Aggregation Concentration and Amyloid Fibril Nucleation

Nucleation and growth of amyloid fibrils were found to only occur in supersaturated solutions above a critical concentration (c_crit). The biophysical meaning of c_crit remained mostly obscure, since typical low values of c_crit in the sub-μM range hamper investigations of potential oligomeric states and their structure. Here, we investigate the parathyroid hormone PTH₈₄ as an example of a functional amyloid fibril forming peptide with a comparably high c_crit of 67±21 μM. We describe a complex concentration dependent prenucleation ensemble of oligomers of different sizes and secondary structure compositions and highlight the occurrence of a trimer and tetramer at c_crit as possible precursors for primary fibril nucleation. Furthermore, the soluble state found in equilibrium with fibrils adopts to the prenucleation state present at c_crit. Our study sheds light onto early events of amyloid formation directly related to the critical concentration and underlines oligomer formation as a key feature of fibril nucleation. Our results contribute to a deeper understanding of the determinants of supersaturated peptide solutions. In the current study we present a biophysical approach to investigate c_crit of amyloid fibril formation of PTH₈₄ in terms of secondary structure, cluster size and residue resolved intermolecular interactions during oligomer formation. Throughout the investigated range of concentrations (1 μM to 500 μM) we found different states of oligomerization with varying ability to contribute to primary fibril nucleation and with a concentration dependent equilibrium. In this context, we identified the previously described c_crit of PTH₈₄ to mark a minimum concentration for the formation of homo-trimers/tetramers. These investigations allowed us to characterize molecular interactions of various oligomeric states that are further converted into elongation competent fibril nuclei during the lag phase of a functional amyloid forming peptide.     

Nucleation of Organic Crystals—A Molecular Perspective

The outcome of synthetic procedures for crystalline organic materials strongly depends on the first steps along the molecular self‐assembly pathway, a process we know as crystal nucleation. New experimental techniques and computational methodologies have spurred significant interest in understanding the detailed molecular mechanisms by which nuclei form and develop into macroscopic crystals. Although classical nucleation theory (CNT) has served well in describing the kinetics of the processes involved, new proposed nucleation mechanisms are additionally concerned with the evolution of structure and the competing nature of crystallization in polymorphic systems. In this Review, we explore the extent to which CNT and nucleation rate measurements can yield molecular‐scale information on this process and summarize current knowledge relating to molecular self‐assembly in nucleating systems.     

Optically Biaxial,Re‐entrant and Frustrated Mesophases in Chiral,Non‐symmetric Liquid Crystal Dimers and Binary Mixtures

Sixteen optically active, non‐symmetric dimers, in which cyanobiphenyl and salicylaldimine mesogens are interlinked by a flexible spacer, were synthesized and characterized. While the terminal chiral tail, in the form of either (R)‐2‐octyloxy or (S)‐2‐octyloxy chain attached to salicylaldimine core, was held constant, the number of methylene units in the spacer was varied from 3 to 10 affording eight pairs of (R & S) enantiomers. They were probed for their thermal properties with the aid of orthoscopy, conoscopy, differential scanning calorimetry and X‐ray powder diffraction. In addition, the binary mixture study was carried out using chiral and achiral dimers with the intensions of stabilizing optically biaxial phase/s, re‐entrant phases and important phase sequences. Notably, one of the chiral dimers as well as some mixtures exhibited a biaxial smectic A (SmA_b) phase appearing between a uniaxial SmA and a re‐entrant uniaxial SmA phases. The mesophases such as chiral nematic (N*) and frustrated phases viz., blue phases (BPs) and twist grain boundary (TGB) phases, were also found to occur in most of the dimers and mixtures. X‐ray diffraction studies revealed that the dimers possessing oxybutoxy and oxypentoxy spacers show interdigitated (SmA_d) phase where smectic periodicity is over 1.4 times the molecular length; whereas in the intercalated SmA (SmA_c) phase formed by a dimer having oxydecoxy spacer the periodicity was found to be approximately half the molecular length. The handedness of the helical structure of the N* phases formed by two enantiomers was examined with the aid of CD measurements; as expected, these enantiomers showed optical activities of equal magnitudes but with opposite signs. Overall, it appears that the chiral dimers and mixtures presented herein may serve as model systems in design and developing novel materials exhibiting the apolar SmA_b phase possessing D_2h symmetry and nematic‐type biaxiality.     

Molecular Dynamics,Phase Transition and Frequency‐Tuned Dielectric Switch of an Ionic Co‐Crystal

Dielectric switches that can be converted between high and low dielectric states by thermal stimuli have attracted much interest owing to their many potential applications. Currently one main drawback for practical application lies in the non‐tunability of their switch temperatures (T_S). We report here an ionic co‐crystal (Me₃NH)₄[Ni(NCS)₆] that contains a multiply rotatable Me₃NH⁺ ion and a solely rotatable one due to a more spacious supramolecular cage for the former one. This compound undergoes an isostructural order–disorder phase transition and it can function as a frequency‐tuned dielectric switch with highly adjustable T_S, which is further revealed by the variable‐temperature structure analyses and molecular dynamics simulations. In addition, the distinct arrangements and molecular dynamics of two coexisting Me₃NH⁺ ions confined in different lattice spaces as well as the notable offset effect on the promoting/hindering of dipolar reorientation after dielectric transition provide a rarely observed but fairly good model for understanding and modulating the dipole motion in crystalline environment.     

Thermally Induced Intra‐Carboxyl Proton Shuttle in a Molecular Rack‐and‐Pinion Cascade Achieving Macroscopic Crystal Deformation

Proton transport via dynamic molecules is ubiquitous in chemistry and biology. However, its use as a switching mechanism for properties in functional molecular assemblies is far less common. In this study, we demonstrate how an intra‐carboxyl proton shuttle can be generated in a molecular assembly akin to a rack‐and‐pinion cascade via a thermally induced single‐crystal‐to‐single‐crystal phase transition. In a triply interpenetrated supramolecular organic framework (SOF), a 4,4′‐azopyridine (azpy) molecule connects to two biphenyl‐3,3′,5,5′‐tetracarboxylic acid (H₄BPTC) molecules to form a functional molecular system with switchable mechanical properties. A temperature change reversibly triggers a molecular movement akin to a rack‐and‐pinion cascade, which mainly involves 1) an intra‐carboxyl proton shuttle coupled with tilting of the azo molecules and azo pedal motion and 2) H₄BPTC translation. Moreover, both the molecular motions are collective, and being propagated across the entire framework, leading to a macroscopic crystal expansion and contraction.     

Dissipative and Autonomous Square‐Wave Self‐Oscillation of a Macroscopic Hybrid Self‐Assembly under Continuous Light Irradiation

Building a bottom‐up supramolecular system to perform continuously autonomous motions will pave the way for the next generation of biomimetic mechanical systems. In biological systems, hierarchical molecular synchronization underlies the generation of spatio‐temporal patterns with dissipative structures. However, it remains difficult to build such self‐organized working objects via artificial techniques. Herein, we show the first example of a square‐wave limit‐cycle self‐oscillatory motion of a noncovalent assembly of oleic acid and an azobenzene derivative. The assembly steadily flips under continuous blue‐light irradiation. Mechanical self‐oscillation is established by successively alternating photoisomerization processes and multi‐stable phase transitions. These results offer a fundamental strategy for creating a supramolecular motor that works progressively under the operation of molecule‐based machines.     

纳米粒子相变的分子动力学研究：Cu453的性质、结构与结晶成核

Molecular dynamics （MD） computer simulations have been carried out to study the structures, properties and crystal nucleation of nanoparticles with 453 Cu atoms. Structure information was analyzed from the MD simulations, while properties of nanoparticles of Cu453, such as melting point, freezing temperature, heat capacity and mo- lar volumes, have been estimated. The face center cubic （FCC） phase and icosahedron （Ih） phase were observed during the quenching process, and nucleation rates of crystallization to FCC crystal of Cu453 at temperatures of 650, 700, 750, and 800 K were analyzed. Both classical nucleation theory （CNT） and diffuse interface theory （DIT） were used to interpret our observed nucleation rates. The free energy and diffuse interface thickness between the liquid and the FCC crystal phases were estimated by the CNT and DIT respectively, and the results show that the DIT does not work properly to the system.     

有机硅复合乳液聚合的动力学特征和成核机理

研究了聚合方法、搅拌强度、反应温度及原料用量对ＰＨＭＳ／ＢＡ复合乳液聚合反应转化率、反应速率的影响。结果表明：反应前期,一次加料法比半连续滴加法聚合速率快,但反应终了转化率却略低于后者;聚合反应速率随搅拌强度增大略有降低,随反应温度升高而加快,Ｅａ＝１３２．７７ｋＪ／ｍｏｌ;反应的速率和转化率随ＰＨＭＳ用量的增加而降低,随ＮＭＡ用量的增加而升高。乳液粒径随搅拌强度的主粒径追踪结果表明：乳液粒径随搅     

Water‐Soluble Non‐Classical Benzene Mimetics

A new generation of saturated benzene mimetics, 2‐oxabicyclo[2.1.1]hexanes, was developed. These compounds were designed as analogues of bicyclo[1.1.1]pentane with an improved water solubility. Crystallographic analysis of 2‐oxabicyclo[2.1.1]hexanes revealed that they occupy a novel chemical space, but, at the same time, resemble the motif of meta‐disubstituted benzenes.     

Experimental Evidence for a Triboluminescent Antiperovskite Ferroelectric: Tris(trimethylammonium) catena‐Tri‐μ‐chloro‐manganate(II) Tetrachloromanganate(II)

The perovskite structure is rich in ferroelectricity. In contrast, ferroelectric antiperovskites have been scarcely confirmed experimentally since the discovery of M₃AB‐type antiperovskites in the 1930s. Ferroelectricity is now revealed in an organic–inorganic hybrid X₃AB antiperovskite structure, which exhibits a clear ferroelectric phase transition 6/mmmF6mm with a high Curie point of 480 K. The physical properties across the phase transition are obviously changed along with the symmetry requirements, providing solid experimental evidence for the ferroelectric phase transition. More interestingly, the discovered antiperovskite shows intense photoluminescence and triboluminescence properties. The confirmation of the triboluminescent ferroelectric antiperovskite will open new avenues to explore excellent optoelectronic properties in the antiperovskite family.     

银团簇结构与特性的分子动力学研究

用分子动力学方法模拟了银团簇的结构与力能学.计算模拟中使用了一种基于第一性原理的原子间互作用多体势函数.通过分子动力学模拟确定了银微团簇(原子个数3～13)的稳态结构;模拟了原子个数为13～141的银FCC晶体结构理想球形团簇的力能学,发现球形银团簇形成三雏紧密结构;计算了平均结合能,给出了结合能随团簇原子数N的变化图,发现随N增大团簇结合能逐渐接近块材的数值.