Influence of steric and electronic effects of substituents on the molecular structures and conformational flexibility of 1,8-naphthalenedicarboximides

A series of 1,8-naphthalenedicarboximide derivatives containing substituents of different steric and electronic nature were studied by X-ray diffraction analysis.Ab initio quantumchemical calculations in the HF/3–21G approximation demonstrated the high conformational flexibility of the imide tetrahydro ring in the molecules of these compounds. The electronic nature of the substituents has no effect on the geometry and conformational flexibility of naphthalenedicarboximides due to weak conjugation between the imide and naphthalene fragments in the molecules. However, the steric effects of the bulky substituents noticeably affect the equilibrium geometry of the imide ring by increasing its conformational flexibility. Translated fromIzvestiya Akademii Nauk. Seriya Khimicheskaya, No. 1, pp. 68–73, January, 2000.     

Structures and photochromic properties of substituted spiroindolinonaphthoxazines

Six indolinospironaphthoxazines were studied by X-ray diffraction analysis. It was demonstrated that the electronic nature of the substituents in the naphthoxazine and indoline fragments has no substantial effect on the C_spiro−O and C_spiro−N bond lengths. Photocolorability of the compounds under study depends only slightly on the abovementioned bond lengths and correlates mainly with the energy of steric strain of the oxazine ring. The stability of the open forms of spiroindolinonaphthoxazines that formed upon photoirradiation is determined to a large extent by the electronic and steric nature of the substituents. The exception is the compound that contains the NO₂ group in the indoline fragment. In the last-mentioned case, the cleavage of the ring occurs through a substantially different pathway. Translated fromIzvestiya Akademii Nauk. Seriya Khimicheskaya, No. 6, pp. 1121–1128, June, 1998.     

Molecular structure and conformation flexibility of 2-oxo- and 2-thioxo-1,2,3,4-tetrahydropyrimidines and their derivatives

The conformational flexibility and effects of the substituents in 2-oxo- and 2-thioxo-1,2,3,4-tetrahydropyrimidines were studied by the semiempirical quantum-chemical AM1 method. The substituents at the double bond have no appreciable effect on the conformational characteristics of the heterocycle. The introduction of substituents to the saturated carbon atom results in the conversion of the tetrahydrocycle to a half-chair conformation and in a substantial decrease in the ring flexibility. The results of calculations are confirmed by the X-ray study of both compounds. Translated fromIzvestiya Akademii Nauk. Seriya Khimicheskaya No. 11, pp. 1941–1946, November, 1997.     

Etude en Résonance Magnétique Nucléaire du Carbone-13 de N-Aryl Pyrazolines-2 Diversement Substituées. Effets de Substituant et Etude Conformationnelle

The ¹³C chemical shifts of 1-phenyl-2-pyrazoline and 25 N-nitrophenyl-2-pyrazolines, with different substituents on the heterocyclic ring, have been assigned. These values are discussed as a function of the steric and electronic nature of the various substituents. The steric effects produced conformational modifications, both in the nitrophenyl and 2-pyrazoline moieties, which explain some of the chemical shifts.     

Spectral properties and conformations of nonlinear ketocyanines

The electronic transitions in molecules of the ketocyanine dyes (polyenic ω,ω′-bisamino ketones) were calculated by quantum chemical methods. Satisfactory agreement was obtained between the experimental bands of the S-S absorption spectra and calculated electronic transitions for the ketocyanine with the central pyranone moiety and the corresponding salt assuming an acute angle between the chromophores and for the ketocyanine with the central pyridone moiety assuming an obtuse angle between the chromophores. Such molecular conformations were confirmed by the gNOESY ¹H NMR data for these dyes. The difference in the conformations of the dyes with the pyranone and pyridone moieties is due, most likely, to steric hindrance created by the central methyl groups in the molecules of the latter. The salts corresponding to these dyes have similar conformational differences. Published in Russian in Izvestiya Akademii Nauk. Seriya Khimicheskaya, No. 10, pp. 1954–1958, October, 2007.     

Structure effects on isomerization pathways and vibrational spectra of epoxysaccharides: a numerical study

Results of a comparative analysis of conformational possibilities of the hexopyranose ring of six epoxysaccharides differing from each other by the position of the oxirane ring within the limits of the hexapyranose ring and having different orientations of substituents and different positions of the oxirane ring with respect to the skeleton plane of the molecules are presented. Numerical simulations based on the Wiberg and Boyd method made it possible to determine all the stationary forms in which anhydropyranose rings can exist. The effect of various structural factors on the character of conformational transformations, heights of transition barriers, and the energy of stationary forms has been investigated. Normal vibrational modes of the stationary forms of the compounds were calculated using molecular mechanics. Based on results of our simulations, we predict a strong effect of steric factors on the vibrational spectra of sugar epoxides. Received: 24 March 1998 / Accepted: 3 September 1998 / Published online: 17 December 1998     

Synthesis and spatial structure of novel organosilicon derivatives of <Emphasis Type="Italic">p-tert</Emphasis>-butylthiacalix[4]arene from two-dimensional NMR data

New organosilicon derivatives of p-tert-butylthiacalix[4]arene with one or two ring fragments at the macrocycle lower rim were synthesized. The spatial structures of the resulting compounds were established by two-dimensional NMR spectroscopy. On going from the methyl substituents at the silicon atom to phenyl substituents, closure of the second silicon-containing ring is hampered because of steric hindrance in the reaction site. Published in Russian in Izvestiya Akademii Nauk. Seriya Khimicheskaya, No. 2, pp. 297–302, February, 2007.     

Conformational mobility of the six-membered ring in 5-oxo-1,3-cyclohexadiene and its derivatives

Molecular mechanics and MNDO calculations showed that the six-membered ring in the molecule of 5-oxo-1,3-cyclohexadiene possesses high conformational mobility. The transition from a planar equilibrium conformation to a distorted sofa conformation in which the C(sp²)-C(=O)-C(sp³)-C(sp²) torsion angle is equal to ±30° increases the energy of the molecule by less than 1 kcal mol^–1. The influence of steric (R = Me, Et, Prⁱ, Bu^t) and electronic (R = NH₂, NO₂) effects of substituents R on the equilibrium conformation and mobility of the carbocycle has been analyzed. Both types of substituents at unsaturated C atoms do not change the equlibrium conformation or flexibility of the six-membered ring. Substituents at saturated C atoms cause the transition of the carbocycle to the distorted sofa conformation and significantly restrict its mobility. The electronic structures of 5-oxo-1,3-cyclohexadiene and its amino and nitro derivatives have been analyzed.Translated fromIzvestiya Akademii Nauk. Seriya Khimicheskaya, No. 5, pp. 849–854, May, 1995.     

Theoretical conformational study of the molecular structures of some bipyridine cardiotonics

Conformational features of amrinone and milrinone have been examined viaab initio (at STO-3G and 3–21G levels) MO theory. The calculated results suggest twisted structures for both the molecules. The higher barrier to rotation of the pyridine ring and restricted conformational flexibility of milrinone are observed to be two significant factors responsible for its greater cardiotonic activity as compared to that of amrinone.     

Spectroscopic and Quantum Mechanical Studies of Substituted Anilines and their Charge-Transfer Complexes with Iodine in Different Solvents

Equilibrium constants and molar extinction coefficients for 1:1 charge-transfer complexes between 2-hydroxyaniline (HA), 5-chloro-2-hydroxyaniline (CHA), and 4-bromo-2,6-dimethylaniline (BMA) as donors and iodine, as a typical σ-acceptor were determined spectrophotometrically in chloroform, dichloromethane, and carbontetrachloride solutions. Spectral characteristics and formation constants are discussed in terms of donor molecular structure and solvent polarity. The stoichiometry of the complexes was established to be 1:1. For this purpose, optical data were subjected to the form of the Rose-Drago equation for 1:1 equilibria. Electronic absorption spectra of the studied anilines were measured in different solvents. Spectral data were reported and band maxima were assigned to the appropriate molecular orbital transitions (π–π^* and n–π^* electronic transition). Solvent effects on the electronic transitions were discussed. Optimized geometry of the studied anilines was obtained at B3LYP/6-31 + G(d). The effect of the electronic factors of the substituents on the geometrical parameters of the ring has been explored. Geometrical values of the ring deviate from the regular hexagonal ring. Intramolecular H-bonds in HA and CHA have been computed at B3LYP/6-31 + G(d) and MP2/6-31 + G(d) levels. The H-bonding distance was calculated to be 2.105 ? in HA and 2.127 ? in CHA.     

Spectroscopic and Quantum Mechanical Studies of Substituted Anilines and their Charge-Transfer Complexes with Iodine in Different Solvents

Summary. Equilibrium constants and molar extinction coefficients for 1:1 charge-transfer complexes between 2-hydroxyaniline (HA), 5-chloro-2-hydroxyaniline (CHA), and 4-bromo-2,6-dimethylaniline (BMA) as donors and iodine, as a typical σ-acceptor were determined spectrophotometrically in chloroform, dichloromethane, and carbontetrachloride solutions. Spectral characteristics and formation constants are discussed in terms of donor molecular structure and solvent polarity. The stoichiometry of the complexes was established to be 1:1. For this purpose, optical data were subjected to the form of the Rose-Drago equation for 1:1 equilibria. Electronic absorption spectra of the studied anilines were measured in different solvents. Spectral data were reported and band maxima were assigned to the appropriate molecular orbital transitions (π–π^* and n–π^* electronic transition). Solvent effects on the electronic transitions were discussed. Optimized geometry of the studied anilines was obtained at B3LYP/6-31 + G(d). The effect of the electronic factors of the substituents on the geometrical parameters of the ring has been explored. Geometrical values of the ring deviate from the regular hexagonal ring. Intramolecular H-bonds in HA and CHA have been computed at B3LYP/6-31 + G(d) and MP2/6-31 + G(d) levels. The H-bonding distance was calculated to be 2.105 ? in HA and 2.127 ? in CHA. Abstracted from her M.Sc. thesis     

Oxidative cyclocondensation of cyclic thio(seleno)ureas. 4. Electronic effects of the substituents and the medium

We have studied the electronic effect of substituents, steric factors, the medium, and the nature of the oxidizing agent on oxidative cyclocondensation of 2-thioxo-4-quinazolone and its substituted derivatives. We have found that electron-donor substituents promote the reaction while electronacceptor substituents inhibit the reaction. __________ Translated from Khimiya Geterotsiklicheskikh Soedinenii, No. 4, pp. 616–622, April, 2006.     

The effect of substituents on the conformational mobility of the heterocycle in 1,4-dihydropyrimidine and its derivatives

The equilibrium geometry of 1,4-dihydropyrimidine, 4,7-dihydro-1,2,4-triazolo[1,5-a]pyrimidine, and their alkyl (Me, Et, Prⁱ, Bu^t) and phenyl derivatives has been calculated by molecular mechanics method. The equilibrium conformation of unsubstituted molecules is planar, but it is easily transformed to the boat conformation with a small change in the conformational energy. The effect of substituents on the geometry and conformational mobility of the dihydropyrimidine ring has been studied.Translated fromIzvestiya Akademii Nauk. Seriya Khimicheskaya, No. 8, pp. 1394–1397, August, 1994.     

Mesomeric effect on the structural and electronic properties of 4-(2-<Emphasis Type="Italic">tert</Emphasis>-butyl-4-methylphenoxy)phthalonitrile

The molecular and crystal structures of the title compound, C₁₉H₁₈N₂O, were determined and characterized by single crystal X-ray diffraction and spectroscopic methods. Details of the molecular geometry imply that there is a mesomeric effect between the electron-withdrawing N atoms of nitrile substituents and electron-donating O atom. Formally, single central O–C_ar bond lengths are considerably different from each other. O–C_ar distance to phthalonitrile ring is shorter than the other O–C_ar distance due to mesomeric effect under discussion. In addition to structural and spectral evidences, possible results from mesomerism of the compound were investigated by topological analysis on the electronic properties using quantum theory of atoms in molecules (QTAIM) approach. It is inferred from topological analysis that the nitrile group in para position has slightly stronger mesomeric effect than that in meta position due to diffusive double charge separation property during meta mesomerism of the compound. Mesomeric effect revealing itself by differences in delocalization indices between certain bonded atom pairs results in considerable decrease in aromaticity of phthalonitrile ring.     

The structure and CH-acidity of CF3-substituted β-thiolactones. A theoretical study

Ab initio calculations of the molecules of CH₃- and CF₃-substituted β-propiothiolactones and the productsof their deprotonation were carried out by the restricted Hartree—Fock method with full geometry optimization using the 6–31 G^* basis set. Peculiarities of the geometry and electronic structure of the systems in question were established. Only 2-methyl-β-propiothiolactone forms a mesomeric stabilized carbanion in the case of proton abstraction from the α-position of thiolactone cycle. Carbanions of 3-methyl, 2-, and 3-thrifluoromethyl-β-propiothiolactones are stabilized due to the ring opening to form ketene thiolate ions. The CH-acidity of fluorine-containing β-thiolactones is much higher than that of nonfluorinated analogs (the differences in the deprotonation energies are 13.4 to 25.2 kcal mol⁻¹). Deceased. Translated fromIzvestiya Akademii Nauk. Seriya Khimicheskaya, No. 9, pp. 1719–1725, September, 1998.     

Conformational Control of Oligo(p‐phenyleneethynylene)s with Intrinsic Substituent Electronic Effects: Origin of the Twist in Pentiptycene‐Containing Systems

Dependence of the backbone planarity of oligo(p‐phenyleneethynylene)s (OPEs) on the intrinsic electronic character of substituents and on the nature of the solvent has been experimentally demonstrated with a series of center‐symmetrical five‐ring systems, pentiptycene‐pentiptycene‐arene‐pentiptycene‐pentiptycene, differing in the substituents on the central arene. In frozen 2‐methyltetrahydrofuran (MTHF), the adjacent pentiptycene units prefer to be in a mutually twisted orientation when the substituents are electron‐withdrawing (F and amido), resulting in a TPPT or TTTT conformation, whereas a planarized PPPP backbone is favored in the case of electron‐donating substituents (alkyl and alkoxy). The propensity to adopt the PPPP form is generally enhanced by replacing MTHF with either methylcyclohexane or mixed ethanol/methanol as solvent. These observations reveal that the twist between adjacent pentiptycene units in OPEs is a consequence of the electronic rather than steric effects of iptycenyl substituents. The electronic effect of iptycenyl substituents is manifested in decreased phenylene π polarizability as the net effect of both electron‐donating hyperconjugation and an electron‐withdrawing inductive effect. Variable‐temperature electronic absorption and emission spectroscopies are the critical tools for this work. Our findings provide important guidelines for conformational and electronic engineering of OPEs and for the design of novel iptycene‐based organic electronic materials.     

Molecular and electronic structures and conformational analysis of derivatives of 9-nitroanthracene, anionic σ-complexes

Potassium 10-methoxy-9-nitroanthracenide was studied by X-ray diffraction analysis. The central ring of the anthracene fragment adopts an asymmetrically flattened boat conformation. The bond lengths in the C(Ar)−C(NO₂)−C(Ar) fragment are indicative of the presence of conjugation between the π-systems of the benzene rings and the nitro group owing to a substantial contribution of theaci form to the structure of the nitro group. Quantum-chemical calculations of anionic σ-complexes of 9-nitroanthracene derivatives were performed. In all cases, the central ring adopts two conformations with the pseudoaxial and pseudoequatorial orientations of the substituents at the saturated C(10) atom, respectively. The relative stability of the conformers and the factors determining the stability were considered. The minima on the potential energy surface have a flattened shape in spite of relatively high barriers to the conformational transition (2–4 kcal mol⁻¹). The deviation of the C(Ar)−C(Ar)−C(sp³)−C(Ar) torsion angle from the equilibrium value by ±20° causes an increase in the energy of the anion by less than 1 kcal mol⁻¹. The effect of the substituents on the charge distribution was considered. Translated fromIzvestiya Akademii Nauk. Seriya Khimicheskaya, No. 3, pp. 438–443, March, 1998.     

Structural variations and electronic substituent effects in phenylcubane derivatives: a quantum chemical study

Electronic substituent effects in 4-substituted 1-phenylcubane derivatives, Ph–C₈H₆–X, have been investigated from the structural changes caused by the substituent X. The molecular structures of 34 derivatives with charged or dipolar substituents have been determined from quantum chemical calculations at the HF/6-31G* and B3LYP/6-311++G** levels of theory. Geometrical variations caused by substitution appear both in the cubane framework and in the benzene ring, but the two kinds of changes show no correlation. The rather small changes in the benzene ring geometry are caused by long-range polar effects (field effects), while the larger changes in the cubane cage are controlled primarily by electronegativity effects. A structural parameter measuring the long-range polar effect of the substituent, S _F^CUB, has been derived from the geometry of the phenyl group acting as a probe. This parameter correlates well with the calculated gas-phase acidities of 4-substituted cubane-1-carboxylic acids, HOOC–C₈H₆–X, and with other indicators of long-range polar effects obtained from bicyclo[2.2.2]octane derivatives. The correlations can further be improved by introducing a resonance parameter as an additional explanatory variable. This indicates that the electron delocalization resulting from hyperconjugative interactions between substituent and cage modifies the long-range polar effect of the substituent. Strong hyperconjugative interactions between some charged substituents and the cubane cage result in remarkable variations in the cage geometry, superimposed onto those ascribed to electronegativity effects.     

Structure-reactivity correlations in the reaction of ethyl bromoacetate with aliphatic carboxylate ions

The second-order rate constants at three different temperatures have been determined for nucleophilic substitution reactions of ethyl bromoacetate with various substituted aliphatic carboxylate ions (XCH₂COO⁻) in 90% acetone-10% water (v/v) mixture and the activation parameters have been evaluated. The rate data have been analysed in terms of electronic and steric effects by using various single and multi-parameterequations. Analysis of the results shows that localized and steric effects are more important than the delocalized effect. The regression coefficient of the inductive component is negative indicating that inductively electron-releasing substituents accelerate the reaction and electron-withdrawing substituents retard it. The steric component corresponds to the reaction being subject to steric acceleration by the substituents. The per cent steric effect has been calculated. The Br?nsted type correlation is fair, and theβ _N value has been determined.     

Solvent effects on some new meso -aryl substituted octabromoporphyrins

A series of porphyrins with tolyl and naphthyl substituents at themeso positions, their octabromoderivatives (OBP) with Br substituents at β-pyrrole positions are synthesised and characterised by chemical analysis,¹H NMR and electronic spectral studies. It is seen that all the OBPs exhibit pronounced red shifts in both the Soret andQ bands of their electronic spectra compared to their non-brominated form in various polar and nonpolar solvents, the energy difference Δv being in the range 2300–2700 cm₋₁. The high energyB band of naphthyl porphyrins (both brominated and nonbrominated) are found to be more red-shifted than that of tolyl porphyrins, owing to the noticeable mesomeric effect of the naphthyl groups. Detailed spectral studies reveal that while none of the nonbrominated porphyrin show solvent-dependent change in theirB andQ bands, all the OBPs manifest significant shifts depending on the nature of solvents. Solvent-solute interaction can be considered to be of strong dipole-dipole nature for OBPs with polar solvents and of π-π type with aromatic non-polar solvents. In the brominated form we find two categories of porphyrins exhibiting distinctly different absorption phenomena in aromatic solvents. The OBPs havingmeso-groups not shielding the porphyrin π-framework exhibit additional absorption peaks (split Soret peaks and broadened Q bands) in some aromatic solvents. This could be explained in terms of π-π type donor-acceptor (DA) complex formation between such bromoporphyrins (acceptor) and the aromatic solvent molecules (donor) that is not possible for OBPs that have bulkymeso groups that block the approach of aromatic solvent molecules close to the porphyrin framework