Coupling of enzymatic and immunoassay steps to detect E. coli: a new, highly sensitive tandem technique for the analysis of low levels of bacteria

A tandem technique for the detection of very low levels E. coli within about 2 h is demonstrated. The technique couples the widely employed microbial enzymatic detection methods with an immunoassay step. The bacterial marker enzyme, E. coli β-D-galactosidase, was used in conjunction with synthetic enzyme substrates to produce products that could be measured with a highly sensitive enzyme-labelled immunosorbent assay (ELISA). The commercially available 4-methylumbelliferyl-β-D-galactoside and a newly prepared substrate, 4-methylcoumarin-3-propionate-7-O-β-D-galactoside, were used with an ELISA for 7-hydroxy-4-methylcoumarin to demonstrate the detection of low levels of E. coli. The 2 h test indicates that a few viable bacteria cells could be detected by the tandem procedure. The end point of the test is an ELISA with colorimetric measurement step. The novel approach retains the essential features of the microbial enzymatic detection procedures and provides a highly sensitive detection system that can be used for rapid screening or quantification of viable microbial cells in water samples. The tandem test is generic for commonly employed glycosidases and other marker enzymes for which 4-methylumbillerone substrates are available.     

Understanding the interaction of multi-walled carbon nanotubes with mutagenic organic pollutants using computational modeling and biological experiments

Carbon nanotubes (CNTs) are very promising materials to remove pollutants from the environment. To develop safe, efficient technologies, it is necessary to understand the mechanisms of interaction between CNTs and pollutants. This requires innovative, interdisciplinary approaches. Detailed chemical analysis of the CNTs along with computational modeling can provide important information about the mechanisms of interaction. If biological experiments are included in these studies, useful complementary information is obtained. To exemplify the use of this approach, we present a case study in which detailed calculations and the Salmonella mutagenicity assay were applied to elucidate how multi-walled CNTs interact with 1-nitropyrene, an important mutagenic pollutant.     

Biocatalytic preparation of enantioenriched 3,4-dihydroxypiperidines and theoretical study of Candida antarctica lipase B enantioselectivity

Enzymatic acetylations of N-substituted cis- and trans-3,4-dihydroxypiperidine and hydrolysis of their diacetylated derivatives have been studied. High enantioselectivities are obtained with Pseudomonas cepacia lipase and Candida antarctica lipase B for the hydrolysis of the trans-derivative, while the cis-derivatives are not adequate substrates in the same biocatalytic conditions. The enantiopreference of these processes can be rationalized by means of a molecular modelling study.     

Facile synthesis of 4-acetyl-coumarins, -thiocoumarin and -quinolin-2(1H)-one via very high α-regioselective Heck coupling on tosylates

An efficient synthesis of a series of methyl ketones at the C4 position of coumarins, coumarin-containing heterocycles and analogous scaffolds is reported via very high α-regioselective Heck coupling using tosylates and in very high yields. Although α-regioselectivity in Heck coupling can be obtained with triflates as substrates, tosylates are less toxic, less expensive and, importantly, more stable.     

Novel aromatics bearing 4-O-methylglucose unit isolated from the oriental crude drug Bombyx Batryticatus

Oriental crude drug, Bombyx Batryticatus, is dried silkworm larva, Bombyx mori L., which are dead and stiffened due to a Beauveria bassiana infection. In traditional Japanese, Korean, and Chinese medicine, it is employed as analgesic and anticonvulsant. We investigated the constituents of Bombyx Batryticatus and isolated four novel aromatics bearing 4-O-methylglucose moiety, BB-1, 2, 3, and 4 (1-4). It is speculated that these compounds are produced by an interaction between plants, insects, and microorganisms.     

Miniaturization of a chloride ion assay for use in a microtiter format

We have miniaturized a common assay for the spectrophotometric determination of chloride in a variety of sample substrates, including biological fluids. The modified assay requires only 2 μL of serum, making it ideal for use with small animal systems for which only small volumes of biological fluids can be obtained. The assay utilized small amounts of inexpensive chemicals, and was shown to provide linear results for chloride up to 150 ppm, and the sensitivity was measured as low as 1 ppm. The assay was employed to measure chloride ion in the serum of alligators, thus allowing for the determination of dehydration status in animals that were exposed to saltwater for prolonged periods of time.     

Identification and quantification of 13 components in Angelica sinensis (Danggui) by gas chromatography-mass spectrometry coupled with pressurized liquid extraction

Angelica sinensis (Danggui in Chinese), a well-known traditional Chinese medicine, is also used as a health food product for women's care in Europe and America. Therefore, the demand for Danggui is enormous throughout the world. Due to the shortage of Angelica sinensis, Angelica acutiloba and Angelica gigas are commonly used as the substitutes of Danggui in the market of southeast Asia. However, the three common Angelica roots showed variation in their genetic and chemical composition. Up to date, it is thought that ferulic acid, ligustilide and other phthalides such as butylidenephthalide are the biologically active components of Danggui. In this paper, the contents of 13 compounds including ferulic acid, Z-ligustilide, E-ligustilide, Z-butylidenephthalide, E-butylidenephthalide, 3-butylphthalide, 3-butylidene-4-hydroxyphthalide, senkyunolide A, 6,7-epoxyligustilide, senkyunolide F, senkyunolide H, senkyunolide I, and 6,7-dihydroxyligustilide were determined or estimated by using gas chromatography-mass spectrometry (GC-MS) coupled with pressurized liquid extraction (PLE). The results showed that GC-MS coupled with PLE offered a simple, rapid and high sensitive method to analysis of components in Angelica root. And the contents of investigated compounds in Angelica sinensis, Angelica acutiloba and Angelica gigas, which are used as Danggui in China, Japan and Korea, respectively, were highly variant. It is thought that interaction of multiple chemical compounds contributes to the therapeutic effects of Chinese medicines. However, the overall clinical efficacy of these different Danggui has not been determined. Therefore, comparison of chemical components and pharmacological activities of different Angelica root is helpful to elucidate the mechanism of therapeutic effects of Danggui.     

Methods for extracting biochemical information from bacterial Raman spectra: an explorative study on Cupriavidus metallidurans

In this study, we explore Raman spectra of bacteria for their biochemical information. Therefore, a database of biomolecules was used and several approaches were applied such as the study of difference spectra, the calculation dot products, the usage of coefficients obtained from an EMSC procedure and the application of 2D correlation spectroscopy. These methods were applied on a dataset containing Raman spectra of Cupriavidus metallidurans LMG 1195 in five stages of its growth, aiming to extract information about the evolution of cell components during growth. EMSC coefficients seemed to be most promising for tracking metabolic products and the results were often confirmed by difference spectra or by 2D correlation spectroscopy.     

Immunomagnetic separation and rapid detection of bacteria using bioluminescence and microfluidics

This paper describes an immunomagnetic separation of target bacterial cells from others by using magnetic bead. The surface of bead was coated with antibodies which can capture specific organism. The binding efficiency of immunomagnetic bead (IMB) capturing target bacterial cells was higher than 98% when the concentrations of target and interferent bacterial cells were at the same level. The concentration of bacteria was determined indirectly by detecting adenosine 5′-triphosphate (ATP) employing bioluminescence (BL) reaction of firefly luciferin-ATP. Benzalkonium chloride (BAC) was used as an ATP extractant from living bacterial cells. We found that BAC could enhance the light emission when the concentration of BAC was less than 5.3 × 10⁻²% (w/v) and the BL intensity reached its maximum at the concentration of BAC was 2.7 × 10⁻²%, which was 10-fold stronger than that without BAC. Based on the principle of the IMB, a microfluidic chip combined with immunofluorescence assay for separating and detecting bacteria simultaneously was also developed. The IMBs were magnetically fixed in the bead-beds of chip channels with a 3-mm diameter of NdFeB permanent magnet. The target bacterial cells can be captured magnetically and observed by a fluorescent microscope.     

Fingerprint analysis of Ligusticum chuanxiong using hydrophilic interaction chromatography and reversed-phase liquid chromatography

Fingerprint analysis is considered one of the most powerful approaches to quality control in traditional Chinese medicines (TCMs). In this study, a binary chromatographic fingerprint analysis was developed using hydrophilic interaction chromatography (HILIC) and reversed-phase liquid chromatography (RPLC) to gain more chemical information about polar compounds and weakly polar compounds. This method was used to construct a chromatographic fingerprint of Ligusticum chuanxiong. The two chromatographic methods demonstrated good precision, reproducibility, and stability, with relative standard deviations of <2% for retention time and 7% for peak area for both HILIC and RPLC separations. Data from the analysis of 14 samples by HILIC and RPLC were processed with similarity analysis, with correlation coefficients and congruence coefficients. This binary fingerprint analysis, using two chromatographic modes, is a powerful tool for characterizing the quality of samples, and can be used for the comprehensive quality control of TCMs.     

Fourier transform infrared spectroscopy and solid-state nuclear magnetic resonance studies of octadecyl modified metal oxides obtained from different silane precursors

Octadecyl (C₁₈) modified metal oxide substrates, including titania, zirconia, hafnia, and alumina, are prepared using two types of silylating reagents, n-octadecyltrihydridosilane and n-octadecyltrichlorosilane. Fourier transform infrared (FTIR) and solid-state ²⁹Si nuclear magnetic resonance (NMR) measurements are performed to examine the cross-linking of the silanes. Solid-state ¹³C NMR spectroscopy provides information about the conformation and mobility of surface-immobilized alkyl chains. Variable temperature FTIR investigations are carried out to study the influence of the organosilane precursors and metal oxides on the conformational order of the alkyl modified systems. It is found that grafting by means of n-octadecyltrichlorosilane yields higher grafting densities than surface modification with n-octadecyltrihydridosilane. Combined pyridine adsorption and diffuse reflectance infrared Fourier transform (DRIFT) measurements are performed on the titania and hafnia substrates to evaluate potential surface heterogeneities, i.e. Lewis and Brønsted sites. Differences in the alkyl chain conformational order within the series of C₁₈ modified metal oxides are explained by the presence of island structures. The reduced C₁₈ conformational order for the samples grafted with n-octadecyltrihydridosilane is traced back to the lower grafting density which in turn points to a lower reactivity of this silylating reagent. The most striking result is the higher conformational order of the C₁₈ chains grafted in the present surface modified metal oxides when compared with silica-based systems. This finding is attributed to the lower porosity of the metal oxide supports along with more closely packed chains on the surface.     

Novel environmentally-benign methods for green-colour protection of bamboo culms and leaves

The objective of this study was to search for appropriate environmental-benign preservatives as green-colour protectors for the culms and leaves of ma bamboo (Dendrocalamus latiflorus), moso bamboo (Phyllostachys pubescens) and makino bamboo (Phyllostachys makinoi). Five water-borne copper-based preservatives, namely ammoniacal copper quaternary compound-type B (ACQ-B), copper azole-type A (CBA-A), copper azole-type B (CA-B), tanalith CY (TCY) and micronized copper quaternary (MCQ), were tested as green-colour protectors. Results revealed that excellent green-colour protection (a* values of −13.2, −7.6 and −6.3, respectively) was obtained when the culms and leaves of ma bamboo, moso bamboo and makino bamboo culms were treated with 0.25% aqueous TCY solution in a 100 °C water bath for 2 h. Furthermore, to evaluate the effects of 0.25% TCY treatment on the green-colour fastness of bamboo culms, two exposure tests including indoor exposure and outdoor weathering were employed in this study. Results from the 6-month exposure tests in both indoor and outdoor environment demonstrated that specimens treated with 0.25% TCY exhibited good colourfastness. To improve the treatment efficacy in bamboo culms, both atmospheric pressure impregnation and vacuum pressure impregnation were used. The results indicated that green-colour protection could be obtained by the two impregnation treatments in 0.25% TCY solution.     

Crystalline properties and decomposition kinetics of cellulose fibers in wood pulp obtained by two pulping processes

In this study two cellulose fibers, Eucalyptus grandis (CEG) and Pinus taeda (CPT), obtained through the kraft and sulfite pulping processes, respectively, were characterized. Fourier transform infrared (FTIR) spectroscopy, X-ray diffraction (XRD) and thermogravimetric analysis (TGA) were carried out. From the XRD analysis the interplanar distance, crystallite size and crystallinity index were calculated and the degradation kinetics parameters were determined by TGA at heating rates of 5, 10, 20 and 40 °C min⁻¹ using the Avrami, Flynn-Wall-Ozawa (FWO) and Criado methods. The results obtained by FTIR showed that the composition of the fibers is similar, while from the XRD analysis slight differences in the crystallinity were observed. The thermogravimetric analysis showed higher thermal stability for CPT than CEG while the values for the activation energy (E_a) were higher for CEG than CPT. The results obtained by Avrami and Criado methods showed that the degradation mechanism in the CEG samples involves a diffusion process while in the case of CPT the degradation process is a phase boundary controlled reaction. The degradation mechanisms demonstrated that the difference between thermal stability and E_a may be due to differences in the type of crystalline structure of the samples obtained through the two pulping processes.     

Platypodiol a novel clerodane diterpene from Baccharis platypoda

There is an urgent need for effective leishmanicidal drugs to replace or supplement those in current use. Our group has been bioprospecting many Brazilian plants looking for potential new ‘hits’ to combat leishmaniasis. We found that Baccharis platypoda was one of the Asteraceae species that displayed leishmanicidal activity. We now describe the isolation of the new clerodane diterpene (1), named platypodiol after its ethanolic leaf extract. Its structure was determined by detailed NMR and ESI-TOF/MS/MS experiments. Considering the few publications about this species, this result has increased the phytochemical knowledge about B. platypoda.     

Influence of electrospraying parameters on the microstructure of La0.6Sr0.4Co0.2F0.8O3−δ films for SOFCs

Ceramics can play a remarkable role in the engineering of intermediate temperature solid oxide fuel cells (IT-SOFCs) capable of meeting the ambitious targets of reduced cost and improved lifetime. While mixed ionic-electronic conductors such as La_xSr_1−xCo_yFe_1−yO_3−δ are being used as volumic cathodes to increase the catalytic performance of these components, adequate microstructures are also an important requirement for optimal performance, particularly at lower operating temperatures. This work is devoted to the fabrication of La_0.6Sr_0.4Co_0.2Fe_0.8O_3−δ films on Ce_0.9Gd_0.1O_2−δ substrates by electrostatic spray deposition (ESD) and to the characterization of the microstructural dependence on the deposition conditions. A wide variety of microstructures ranging from dense to porous, with particular features such as reticulation and micro-porosity, were obtained by varying the ESD deposition parameters: nozzle-to-substrate distance (15, 30, 43, 45, and 58 mm), solution flow rate (0.34 and 1.5 mL/h), and substrate temperature (300, 350, 400 and 450 °C). The correlation between deposition parameters and resulting microstructures was systematically studied and put into evidence.     

Measuring ‘hydrophobicity’ of filamentous bacteria found in wastewater treatment plants

Attempts to measure the hydrophobicity of the cell surfaces of Gordonia amarae and Rhodococcus erythropolis, filamentous bacteria found in wastewater treatment plants, by several methods—microbial adhesion to hydrocarbons (MATH) or bacterial adhesion to hydrocarbons (BATH), contact angle, and micro-sphere adhesion to cells (MAC)—were unsuccessful. The results were erratic and inconsistent. This was in part because of the filamentous growth habit of G. amarae, but it was also a consequence of the fact that the ‘hydrophobicity’ of bacterial cells is not a clearly defined quantity. A technique is introduced in which bacteria are suspended in solutions of synthetic surfactants (non-ionic, cationic and anionic), and the suspensions aerated under defined conditions. The partitioning of bacterial cells between the foam and liquid phases was reproducible. The method was tested in model systems in which the bacteria were replaced by silica particles with defined surface modifications. Although this technique is not a direct measure of ‘hydrophobicity’, the partitioning of cells depends in part upon their surface hydrophobicity. In addition, qualitative information is gained about ionic interactions between the bacteria and the bubble surface. The results are pertinent to the problem of foaming in wastewater treatment plants.     

Cymodienol and cymodiene: new cytotoxic diarylheptanoids from the sea grass Cymodocea nodosa

The two new diarylheptanoids, cymodienol (1), and cymodiene (2), obtained from specimens of the sea grass Cymodocea nodosa, collected from the coastal areas of central Greece, are the first members of this class isolated from marine organisms. The chemical structures of the two metabolites were assigned on the basis of their NMR and MS spectroscopic data, including information obtained by 1D- and 2D-NMR experiments. Metabolite 2 possesses an unprecedented skeleton that might be biosynthetically related to metabolite 1. Cymodienol (1) was found to exhibit significant cytotoxic activity against two lung cancer cell lines.     

Identification of essential components of Houttuynia cordata by gas chromatography/mass spectrometry and the integrated chemometric approach

Starting with Biller-Biemann's work [J.E. Biller, K. Biemann, Anal. Lett. 7 (1974) 515], various kinds of approaches have been proposed to extract GC/MS data to obtain pure components responses. In this paper, an integrated chemometric approach is proposed, which combine four sequential steps, data pretreatment, component perception, resolution and component identification, and then the proposed approach is manipulated to analyze the essential oils of a herbal medicine named Houttuynia cordata (HC). On the basis of the selective information obtained from both chromatograms and mass spectra, the proposed integrated chemometric approach can resolve the two-way GC/MS responses matrix into pure chromatograms and mass spectra without any model assumption on the peak shape. The resolution results obtained from HC samples demonstrate the performance of the proposed approach and indicate that it may be a promising one for analyzing complex chromatograms.     

Electrowetting — From statics to dynamics

More than one century ago, Lippmann found that capillary forces can be effectively controlled by external electrostatic forces. As a simple example, by applying a voltage between a conducting liquid droplet and the surface it is sitting on we are able to adjust the wetting angle of the drop. Since Lippmann's findings, electrocapillary phenomena – or electrowetting – have developed into a series of tools for manipulating microdroplets on solid surfaces, or small amounts of liquids in capillaries for microfluidic applications. In this article, we briefly review some recent progress of fundamental understanding of electrowetting and address some still unsolved issues. Specifically, we focus on static and dynamic electrowetting. In static electrowetting, we discuss some basic phenomena found in DC and AC electrowetting, and some theories about the origin of contact angle saturation. In dynamic electrowetting, we introduce some studies about this rather recent area. At last, we address some other capillary phenomena governed by electrostatics and we give an outlook that might stimulate further investigations on electrowetting.     

Differential ESI-MS behaviour of highly similar metallothioneins

ESI-MS can only be accepted as a quantification method when using standards with a high resemblance to the analyte(s). Unfortunately, this is usually not applicable to metallothioneins (MTs), a superfamily of singular metal-binding cysteine-rich proteins, present in all living organisms, since the absence of suitable reference material due to the high diversity among metal-MT species precludes their quantification by molecular mass spectrometry. Even thus, it is widely assumed that the intensities of the ESI-MS peaks of similar species are directly correlated with their relative concentration in the sample, and this has been extended to the determination of different MT proteins coexisting in a sample.Practically all organisms contain several MT isoforms, some of them exhibiting highly similar sequences, with conserved coordinating Cys residues. For the current analysis, we used as a model system the MT isoforms of two terrestrial snails (Helix pomatia and Cornu aspersum). Hence, distinct samples were prepared by mixing, at different molar ratios, the recombinant HpCuMT and HpCdMT isoforms from H. pomatia, or the recombinant CaCuMT, CaCdMT and CaCdCuMT isoforms from C. aspersum, and they were analyzed by ESI-MS both at neutral pH (for Zn-loaded MT forms) and at acidic pH (for the corresponding apo-forms). The results here presented reveal that the ESI-MS peak intensity of a single MT species strongly depends on its sensitivity to be ionized, and thus, on the presence or absence of metal ions bound. Furthermore, our data demonstrate that very similar MT isoforms of the same organism with similar pI (ranging from 7.9 to 8.3) can show a clear different sensitivity to ES ionization, something that cannot be readily predicted only by consideration of their amino acid content. In conclusion, even in this optimum case, deductions about quantity features of MT samples drawn from ESI-MS measurements should be carefully considered.