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1.
Purine 3′:5′‐cyclic nucleotides are very well known for their role as the secondary messengers in hormone action and cellular signal transduction. Nonetheless, their solid‐state conformational details still require investigation. Five crystals containing purine 3′:5′‐cyclic nucleotides have been obtained and structurally characterized, namely adenosine 3′:5′‐cyclic phosphate dihydrate, C10H12N5O6P·2H2O or cAMP·2H2O, (I), adenosine 3′:5′‐cyclic phosphate 0.3‐hydrate, C10H12N5O6P·0.3H2O or cAMP·0.3H2O, (II), guanosine 3′:5′‐cyclic phosphate pentahydrate, C10H12N5O7P·5H2O or cGMP·5H2O, (III), sodium guanosine 3′:5′‐cyclic phosphate tetrahydrate, Na+·C10H11N5O7P·4H2O or Na(cGMP)·4H2O, (IV), and sodium inosine 3′:5′‐cyclic phosphate tetrahydrate, Na+·C10H10N4O7P·4H2O or Na(cIMP)·4H2O, (V). Most of the cyclic nucleotide zwitterions/anions [two from four cAMP present in total in (I) and (II), cGMP in (III), cGMP in (IV) and cIMP in (V)] are syn conformers about the N‐glycosidic bond, and this nucleobase arrangement is accompanied by Crib—H…Npur hydrogen bonds (rib = ribose and pur = purine). The base orientation is tuned by the ribose pucker. An analysis of data obtained from the Cambridge Structural Database made in the context of synanti conformational preferences has revealed that among the syn conformers of various purine nucleotides, cyclic nucleotides and dinucleotides predominate significantly. The interactions stabilizing the syn conformation have been indicated. The inter‐nucleotide contacts in (I)–(V) have been systematized in terms of the chemical groups involved. All five structures display three‐dimensional hydrogen‐bonded networks.  相似文献   

2.
Two new one‐dimensional CuII coordination polymers (CPs) containing the C2h‐symmetric terphenyl‐based dicarboxylate linker 1,1′:4′,1′′‐terphenyl‐3,3′‐dicarboxylate (3,3′‐TPDC), namely catena‐poly[[bis(dimethylamine‐κN)copper(II)]‐μ‐1,1′:4′,1′′‐terphenyl‐3,3′‐dicarboxylato‐κ4O,O′:O′′:O′′′] monohydrate], {[Cu(C20H12O4)(C2H7N)2]·H2O}n, (I), and catena‐poly[[aquabis(dimethylamine‐κN)copper(II)]‐μ‐1,1′:4′,1′′‐terphenyl‐3,3′‐dicarboxylato‐κ2O3:O3′] monohydrate], {[Cu(C20H12O4)(C2H7N)2(H2O)]·H2O}n, (II), were both obtained from two different methods of preparation: one reaction was performed in the presence of 1,4‐diazabicyclo[2.2.2]octane (DABCO) as a potential pillar ligand and the other was carried out in the absence of the DABCO pillar. Both reactions afforded crystals of different colours, i.e. violet plates for (I) and blue needles for (II), both of which were analysed by X‐ray crystallography. The 3,3′‐TPDC bridging ligands coordinate the CuII ions in asymmetric chelating modes in (I) and in monodenate binding modes in (II), forming one‐dimensional chains in each case. Both coordination polymers contain two coordinated dimethylamine ligands in mutually trans positions, and there is an additional aqua ligand in (II). The solvent water molecules are involved in hydrogen bonds between the one‐dimensional coordination polymer chains, forming a two‐dimensional network in (I) and a three‐dimensional network in (II).  相似文献   

3.
The title hydrated ionic complex, [Ni(CH3COO)(C12H12N2)2]ClO4·H2O or [Ni(ac)(5,5′‐dmbpy)2]ClO4·H2O (where 5,5′‐dmbpy is 5,5′‐dimethyl‐2,2′‐bipyridine and ac is acetate), (1), was isolated as violet crystals from the aqueous ethanolic nickel acetate–5,5′‐dmbpy–KClO4 system. Within the complex cation, the NiII atom is hexacoordinated by two chelating 5,5′‐dmbpy ligands and one chelating ac ligand. The mean Ni—N and Ni—O bond lengths are 2.0628 (17) and 2.1341 (15) Å, respectively. The water solvent molecule is disordered over two partially occupied positions and links two complex cations and two perchlorate anions into hydrogen‐bonded centrosymmetric dimers, which are further connected by π–π interactions. The magnetic properties of (1) at low temperatures are governed by the action of single‐ion anisotropy, D, which arises from the reduced local symmetry of the cis‐NiO2N4 chromophore. The fitting of the variable‐temperature magnetic data (2–300 K) gives giso = 2.134 and D/hc = 3.13 cm−1.  相似文献   

4.
The new synthesized ligand (DADMBTZ = 2,2′‐diamino‐5,5′‐dimethyl‐4,4′‐bithiazole), which is mentioned in this text, is used for preparing the two new complexes [Zn(DADMBTZ)3](ClO4)2. 0.8MeOH.0.2H2O ( 1 ) and [Cd(DADMBTZ)3](ClO4)2 ( 2 ). The characterization was done by IR, 1H, 13C NMR spectroscopy, elemental analysis and single crystal X‐ray determination. In reaction with DADMBTZ, zinc(II) and cadmium(II) show different characterization. In 2 , to form a tris‐chelate complex with nearly C3 symmetry for coordination polyhedron, DADMBTZ acts as a bidentate ligand. In 1 , this difference maybe relevant to small radii of Zn2+ which make one of the DADMBTZ ligands act as a monodentate ligand to form the five coordinated Zn2+ complex. In both 1 and 2 complexes the anions are symmetrically different. 1 and 2 complexes form 2‐D and 3‐D networks via N‐H···O and N‐H···N hydrogen bonds, respectively.  相似文献   

5.
Two new layered complexes with the formulas of {[Cu(H2O)(HL)2Cl](NO3)}n ( 1 ) and {[Cu(H2O)2(HL)2](NO3)2}n ( 2 ) were solvothermally synthesized by the reactions of the bulky conjugated 4′‐(4‐hydroxyphenyl)‐4,2′:6′,4′′‐terpyridine ligand (HL) with different CuII salts, which were further used as photocatalysts to achieve hydrogen production from water splitting. Single‐crystal structural analyses reveal that both complexes feature coplanar (4 4) layers with different connection manners between the HL extended Z‐shaped chains. More interestingly, 1 possessing more negative conduction band potential and higher structural stability exhibits a large hydrogen production rate of 2.43 mmol · g–1 · h–1, which is four times higher than that of 2 . Thus, the CuII‐based coordination polymers modified by the bulky conjugated organic ligand can become potentially promising non‐Pt photocatalysts for hydrogen production from water splitting.  相似文献   

6.
The formation constants of the species formed in the systems H+ + dimethyltin(IV) + 5′‐IMP and 5′‐UMP, H+ + 5′‐IMP and H+ + 5′‐UMP have been determined in aqueous solution in the pH range 1.5–9.5 at constant temperature (25 °C) and constant ionic strength (0.1 mol dm−3 NaClO4), using spectrophotometric and potentiometric techniques. 1H and 31P NMR investigations in aqueous solution confirmed the species formation. The precipitated complexes of IMP and UMP by Me2Sn(IV)2+ at low pH values were characterized by elemental analysis and FTIR spectroscopy methods, the bonding sites of the ligands were determined and ruled out purine and pyrimidine moieties (N‐7 and N‐1 in IMP and N‐3 in UMP, respectively) while a bidentated coordination of the phosphate group is concluded in both cases. Finally, the experiments revealed the existence of complexes with trigonal bipyramidal structures that is in agreement with similar systems resulted previously. Copyright © 2008 John Wiley & Sons, Ltd.  相似文献   

7.
Four metal‐organic frameworks (MOFs), {[Mn3.5L(OH)(HCOO)4(DMF)] · H2O} ( 1 ), {[In2.5L2O(OH)1.5(H2O)2] · DMF · CH3CN · 2H2O} ( 2 ), {[Pb4L3O(DMA)] · CH3CN} ( 3 ), and {[LaL(NO3)(DMF)2] · 2H2O} ( 4 ) were synthesized by utilizing the ligand 2,2′,6,6′‐tetramethoxy‐4,4′‐biphenyldicarboxylic acid (H2L) via solvothermal methods. All MOFs were characterized by single‐crystal X‐ray diffraction, powder X‐ray diffraction, thermogravimetric analysis, and infrared spectroscopy. In 1 , the Mn2+ ions are interconnected by formic groups in situ produced via DMF decomposition to form a rare 2D macrocyclic plane, which is further linked by L2– to construct the final 3D network. In 2 , 1D zip‐like infinite chain is formed and then interconnected to build the 3D framework. In 3 , a [Pb64‐O)2(O2C)10(DMA)2] cluster with a centrosymmetric [Pb64‐O)2]8+ octahedral core is formed in the 3D structure. In 4 , the La3+ ions are connected with each other through carboxylate groups of L2– to generate 1D zigzag chain, which is further linked by L2– to construct a 3D network with sra topology. Solid photoluminescence properties of 3 and 4 were also investigated.  相似文献   

8.
In catena‐poly[[dichloridocobalt(II)]‐μ‐(1,1′‐dimethyl‐4,4′‐bipyrazole‐κ2N2:N2′)], [CoCl2(C8H10N4)]n, (1), two independent bipyrazole ligands (Me2bpz) are situated across centres of inversion and in tetraaquabis(1,1′‐dimethyl‐4,4′‐bipyrazole‐κN2)cobalt(II) dichloride–1,1′‐dimethyl‐4,4′‐bipyrazole–water (1/2/2), [Co(C8H10N4)2(H2O)4]Cl2·2C8H10N4·2H2O, (2), the Co2+ cation lies on an inversion centre and two noncoordinated Me2bpz molecules are also situated across centres of inversion. The compounds are the first complexes involving N,N′‐disubstituted 4,4′‐bipyrazole tectons. They reveal a relatively poor coordination ability of the ligand, resulting in a Co–pyrazole coordination ratio of only 1:2. Compound (1) adopts a zigzag chain structure with bitopic Me2bpz links between tetrahedral CoII ions. Interchain interactions occur by means of very weak C—H...Cl hydrogen bonding. Complex (2) comprises discrete octahedral trans‐[Co(Me2bpz)2(H2O)4]2+ cations formed by monodentate Me2bpz ligands. Two equivalents of additional noncoordinated Me2bpz tectons are important as `second‐sphere ligands' connecting the cations by means of relatively strong O—H...N hydrogen bonding with generation of doubly interpenetrated pcu (α‐Po) frameworks. Noncoordinated chloride anions and solvent water molecules afford hydrogen‐bonded [(Cl)2(H2O)2] rhombs, which establish topological links between the above frameworks, producing a rare eight‐coordinated uninodal net of {424.5.63} ( ilc ) topology.  相似文献   

9.
The crystal structures of triethyl­ammonium adenosine cyclic 2′,3′‐phosphate {systematic name: triethyl­ammonium 4‐(6‐amino­purin‐9‐yl)‐6‐hydroxy­methyl‐2‐oxido‐2‐oxoperhydro­furano[3,4‐c][1,3,2]dioxaphosphole}, Et3NH(2′,3′‐cAMP) or C6H16N+·C10H11N5O6P, (I), and guanosine cyclic 2′,3′‐phosphate monohydrate {systematic name: triethyl­ammonium 6‐hydroxy­methyl‐2‐oxido‐2‐oxo‐4‐(6‐oxo‐1,6‐dihydro­purin‐9‐yl)perhydro­furano[3,4‐c][1,3,2]dioxaphosphole monohydrate}, [Et3NH(2′,3′‐cGMP)]·H2O or C6H16N+·C10H11N5O7P·H2O, (II), reveal different nucleobase orientations, viz. anti in (I) and syn in (II). These are stabilized by different inter‐ and intra­molecular hydrogen bonds. The structures also exhibit different ribose ring puckering [4E in (I) and 3T2 in (II)] and slightly different 1,3,2‐dioxaphospho­lane ring conformations, viz. envelope in (I) and puckered in (II). Infinite ribbons of 2′,3′‐cAMP and helical chains of 2′,3′‐cGMP ions, both formed by O—H⋯O, N—H⋯X and C—H⋯X (X = O or N) hydrogen‐bond contacts, characterize (I) and (II), respectively.  相似文献   

10.
The reaction of Cu(NO3)2·3H2O with 2,4′‐oxybis(benzoic acid) and 4,4′‐bipyridine under hydrothermal conditions produced a new mixed‐ligand two‐dimensional copper(II) coordination polymer, namely poly[[(μ‐4,4′‐bipyridine‐κ2N ,N ′)[μ‐2,4′‐oxybis(benzoato)‐κ4O 2,O 2′:O 4,O 4′]copper(II)] monohydrate], {[Cu(C14H8O5)(C10H8N2)]·H2O}n , which was characterized by elemental analysis, IR spectroscopy, thermogravimetric analysis and single‐crystal X‐ray diffraction. The X‐ray diffraction crystal structure analysis reveals that the CuII ions are connected to form a two‐dimensional wave‐like network through 4,4′‐bipyridine and 2,4′‐oxybis(benzoate) ligands. The two‐dimensional layers are expanded into a three‐dimensional supramolecular structure through intermolecular O—H…O and C—H…O hydrogen bonds. Furthermore, magnetic susceptibility measurements indicate that the complex shows weak antiferromagnetic interactions between adjacent CuII ions.  相似文献   

11.
4,4′‐Bipyridine‐1,1′‐diium (H2bipy) acetylenedicarboxylate, C10H12N22+·C4O42−, (1), is a new member of a family of related structures with similar unit‐cell parameters. The structures in this family reported previously [Chen et al. (2012). CrystEngComm, 14 , 6400–6403] are (H2bipy)[Cu(ox)2] (ox is oxalate), (2), (H2bipy)[NaH(ox)2], (3), and (H2bipy)[H2(ox)2], (4). Compound (1) has a one‐dimensional structure, in which H2bipy2+ cations and acetylenedicarboxylate (ADC2−) anions are linked through a typical supramolecular synthon, i.e.R22(7), and form linear `–cation–anion–' ribbons. Through an array of nonclassical C—H...O hydrogen bonds, adjacent ribbons interact to give two‐dimensional sheets. These sheets stack to form a layered structure viaπ–π interactions between the H2bipy2+ cations of neighbouring layers. The supramolecular isostructurality of compounds (1)–(4) is ascribed to the synergistic effect of multiple interactions in these structures. The balanced strong and weak intermolecular interactions stabilizing this structure type include strong charge‐assisted N—H...O hydrogen bonds, C—H...O contacts and π–π interactions.  相似文献   

12.
In the title salt, C14H18N22+·2C9H5N4O, the 1,1′‐diethyl‐4,4′‐bipyridine‐1,1′‐diium dication lies across a centre of inversion in the space group P21/c. In the 1,1,3,3‐tetracyano‐2‐ethoxypropenide anion, the two independent –C(CN)2 units are rotated, in conrotatory fashion, out of the plane of the central propenide unit, making dihedral angles with the central unit of 16.0 (2) and 23.0 (2)°. The ionic components are linked by C—H...N hydrogen bonds to form a complex sheet structure, within which each cation acts as a sixfold donor of hydrogen bonds and each anion acts as a threefold acceptor of hydrogen bonds.  相似文献   

13.
In methyl­aminium 4′,7‐dihydroxy­isoflavone‐3′‐sulfonate dihydrate, CH6N+·C15H9O7S·2H2O, 11 hydrogen bonds exist between the methyl­aminium cations, the iso­flavone‐3′‐sulfonate anions and the solvent water mol­ecules. In hexa­aqua­iron(II) bis­(4′,7‐diethoxy­isoflavone‐3′‐sulfonate) tetra­hydrate, [Fe(H2O)6](C19H17O7S)2·4H2O, 12 hydrogen bonds exist between the centrosymmetric [Fe(H2O)6]2+ cation, the isoflavone‐3′‐sulfonate anions and the solvent water mol­ecules. Additional π–π stacking inter­actions generate three‐dimensional supramolecular structures in both compounds.  相似文献   

14.
The synthesis of two O‐2′,3′‐cyclic ketals, i.e., 5 and 6 , of the cytostatic 5‐fluorouridine ( 2 ), carrying a cyclopentane and/or a cyclohexane ring, respectively, is described. The novel compounds were characterized by 1H‐, 19F‐, and 13C‐NMR, and UV spectroscopy, as well as by elemental analyses. Their crystal structures were determined by X‐ray analysis. Both compounds 5 and 6 show an anti‐conformation at the N‐glycosidic bond which is biased from +ac to +ap compared to the parent nucleoside 2 . The sugar puckering is changed from 2′E to 3′E going along with a reduction of the puckering amplitude τm by ca. 10–13° due to the ketalization. The conformation about the sugar exocyclic bond C(4′)? C(5′) of 5 and 6 remains unchanged, i.e., g+, compared with compound 2 .  相似文献   

15.
Three new metal–nitroxide complexes {[Ni(NIT4Py)2(obb)(H2O)2] · 1.5H2O}n ( 1 ), {[Co(NIT4Py)2(obb)(H2O)2] · 2H2O}n ( 2 ), and [Co(IM4Py)2(obb)2(H2O)2][Co(IM4Py)2(H2O)4] · 10H2O ( 3 ) with the V‐shaped 4,4′‐oxybis(benzoate) [NIT4Py = 2‐(4′‐pyridyl)‐4,4,5,5‐tetramethylimidazoline‐1‐oxyl‐3‐oxide, IM4Py = 2‐(4′‐pyridyl)‐4,4,5,5‐tetramethylimidazoline‐1‐oxide, and obb = 4, 4′‐oxybis(benzoate) anion] were synthesized and structurally characterized. Single‐crystal X‐ray analyses indicate that complexes 1 and 2 crystallize in neutral one‐dimensional (1D) zigzag chains, in which the nitroxide–metal–nitroxide units are linked by the V‐shaped 4,4′‐oxybis(benzoate) anions, whereas complex 3 consists of isolated mononuclear [Co(IM4Py)2(obb)2(H2O)2]2– anions and [Co(IM4Py)2(H2O)4]2+ ions. Magnetic measurements show that complexes 1 and 2 both exhibit weak antiferromagnetic interactions between the metal ions and the nitroxides.  相似文献   

16.
In the crystal structure of the l ‐His–cIMP complex, i.e.l ‐histidinium inosine 3′:5′‐cyclic phosphate [systematic name: 5‐(2‐amino‐2‐carboxyethyl)‐1H‐imidazol‐3‐ium 7‐hydroxy‐2‐oxo‐6‐(6‐oxo‐6,9‐dihydro‐1H‐purin‐9‐yl)‐4a,6,7,7a‐tetrahydro‐4H‐1,3,5,2λ5‐furo[3,2‐d][1,3,2λ5]dioxaphosphinin‐2‐olate], C6H10N3O2+·C10H10N4O7P, the Hoogsteen edge of the hypoxanthine (Hyp) base of cIMP and the Hyp face are engaged in specific amino acid–nucleotide (His...cIMP) recognition, i.e. by abutting edge‐to‐edge and by π–π stacking, respectively. The Watson–Crick edge of Hyp and the cIMP phosphate group play a role in nonspecific His...cIMP contacts. The interactions between the cIMP anions (anti/C3′–endo/transgauche/chair conformers) are realized mainly between riboses and phosphate groups. The results for this l ‐His–cIMP complex, compared with those for the previously reported solvated l ‐His–IMP crystal structure, indicate a different nature of amino acid–nucleotide recognition and interactions upon the 3′:5′‐cyclization of the nucleotide phosphate group.  相似文献   

17.
In the title coordination polymer, {[Cd(C6H8O4S)(C13H14N2)]·H2O}n, the CdII atom displays a distorted octahedral coordination, formed by three carboxylate O atoms and one S atom from three different 3,3′‐thiodipropionate ligands, and two N atoms from two different 4,4′‐(propane‐1,3‐diyl)dipyridine ligands. The CdII centres are bridged through carboxylate O atoms of 3,3′‐thiodipropionate ligands and through N atoms of 4,4′‐(propane‐1,3‐diyl)dipyridine ligands to form two different one‐dimensional chains, which intersect to form a two‐dimensional layer. These two‐dimensional layers are linked by S atoms of 3,3′‐thiodipropionate ligands from adjacent layers to form a three‐dimensional network.  相似文献   

18.
Two novel inclusion compounds of 4,4′‐sulfonyldibenzoate anions and tetrapropylammonium cations with different ancillary molecules of water and boric acid, namely bis(tetrapropylammonium) 4,4′‐sulfonyldibenzoate dihydrate, 2C12H28N+·C14H8O6S2−·H2O ( 1 ), and bis(tetrapropylammonium) 4,4′‐sulfonyldibenzoate bis(boric acid), 2C12H28N+·C14H8O6S2−·2H3BO3 ( 2 ), were prepared and characterized using single‐crystal X‐ray diffraction. In the two salts, the host 4,4′‐sulfonyldibenzoic acid molecules, which are converted to the corresponding anions under basic conditions, can be regarded as proton acceptors which link different proton donors of the ancillary molecules of water or boric acid. In this way, an isolated hydrogen‐bonded tetramer is constructed in salt 1 and a ribbon is constructed in salt 2 . The tetramers and ribbons are then packed in a repeating manner to generate various host frameworks, and the tetrapropylammonium guest counter‐ions are contained in the cavities of the host lattices to give the final stable crystal structures. In these two salts, although the host anion and guest cation are the same, the difference in the ancillary small molecules results in different structures, indicating the significance of ancillary molecules in the formation of crystal structures.  相似文献   

19.
Two new coordination polymers, {[Cd2(btc)(2,2′‐bpy)2] · H2O}n ( 1 ) and [Zn2(btc)(2,2′‐bpy)(H2O)]n ( 2 ) (H4btc = biphenyl‐2,2′,4,4′‐tetracarboxylic acid, 2,2′‐bpy = 2,2′‐bipyridine), were synthesized hydrothermally under similar conditions and characterized by elemental analysis, IR spectra, TGA, and single‐crystal X‐ray diffraction analysis. In complexes 1 and 2 , the (btc)4– ligand acts as connectors to link metal ions to give a 2D bilayer network of 1 and a 3D metal‐organic framework of 2 , respectively. The differences in the structures are induced by diverging coordination modes of the (btc)4– ligand, which can be attributed to the difference metal ions in sizes. The results indicate that metal ions have significant effects on the formation and structures of the final complexes. Additionally, the fluorescent properties of the two complexes were also studied in the solid state at room temperature.  相似文献   

20.
Carboxylate molecular crystals have been of interest due to the presence of hydrogen bonding, which plays a significant role in chemical and crystal engineering, as well as in supramolecular chemistry. Acid–base adducts possess hydrogen bonds which increase the thermal and mechanical stability of the crystal. 2,2′‐Thiodiacetic acid (Tda) is a versatile ligand that has been widely explored, employing its multidendate and chelating coordination abilities with many metals; however, charge‐transfer complexes of thiodiacetic acid have not been reported. Two salts, namely ethylenediaminium 2,2′‐thiodiacetate, C2H10N22+·C4H4O4S22−, denoted Tdaen, and 2‐aminoanilinium 2‐(carboxymethylsulfanyl)acetate, C6H9N2+·C4H5O4S, denoted Tdaophen, were synthesized and characterized by IR, 1H and 13C NMR spectroscopies, and single‐crystal X‐ray diffraction. In these salts, Tda reacts with the aliphatic (ethylenediamine) and aromatic (o‐phenylenediamine) diamines, and deprotonates them to form anions with different valencies and different supramolecular networks. In Tdaen, the divalent Tda2− anions form one‐dimensional linear supramolecular chains and these are extended into a three‐dimensional sandwich‐type supramolecular network by interaction with the ethylenediaminium cations. However, in Tdaophen, the monovalent Tda anions form one‐dimensional zigzag supramolecular chains, which are extended into a three‐dimensional supramolecular network by interaction with the 2‐aminoanilinium cations. Thus, both three‐dimensional structures display different ring motifs. The structures of these diamines, which are influenced by hydrogen‐bonded assemblies in the molecular crystals, are discussed in detail.  相似文献   

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