Hydrogen‐bonded networks in trans‐3‐(3‐pyridyl)acrylic acid and rctt‐3,3′‐(3,4‐dicarboxycyclobutane‐1,2‐diyl)dipyridinium dichloride

The structure of trans‐3‐(3‐pyridyl)acrylic acid, C₈H₇NO₂, (I), possesses a two‐dimensional hydrogen‐bonded array of supramolecular ribbons assembled via heterodimeric synthons between the pyridine and carboxyl groups. This compound is photoreactive in the solid state as a result of close contacts between the double bonds of neighbouring molecules [3.821 (1) Å] along the a axis. The crystal structure of the photoproduct, rctt‐3,3′‐(3,4‐dicarboxycyclobutane‐1,2‐diyl)dipyridinium dichloride, C₁₆H₁₆N₂O₄²⁺·2Cl⁻, (II), consists of a three‐dimensional hydrogen‐bonded network built from crosslinking of helical chains integrated by self‐assembly of dipyridinium cations and Cl⁻ anions via different O—H...Cl, C—H...Cl and N⁺—H...Cl hydrogen‐bond interactions.     

Three isotypic polymeric complexes with rare earth cations,but‐2‐enoate anions and 4,4′‐(ethane‐1,2‐diyl)dipyridine and 4,4′‐(ethene‐1,2‐diyl)dipyridine bridging ligands

Three isotypic rare earth complexes, catena‐poly[[aquabis(but‐2‐enoato‐κ²O,O′)yttrium(III)]‐bis(μ‐but‐2‐enoato)‐κ³O,O′:O;κ³O:O,O′‐[aquabis(but‐2‐enoato‐κ²O,O′)yttrium(III)]‐μ‐4,4′‐(ethane‐1,2‐diyl)dipyridine‐κ²N:N′], [Y₂(C₄H₅O₂)₆(C₁₂H₁₂N₂)(H₂O)₂], the gadolinium(III) analogue, [Gd₂(C₄H₅O₂)₆(C₁₂H₁₂N₂)(H₂O)₂], and the gadolinium(III) analogue with a 4,4′‐(ethene‐1,2‐diyl)dipyridine bridging ligand, [Gd₂(C₄H₅O₂)₆(C₁₂H₁₀N₂)(H₂O)₂], are one‐dimensional coordination polymers made up of centrosymmetric dinuclear [M(but‐2‐enoato)₃(H₂O)]₂ units (M = rare earth), further bridged by centrosymmetric 4,4′‐(ethane‐1,2‐diyl)dipyridine or 4,4′‐(ethene‐1,2‐diyl)dipyridine spacers into sets of chains parallel to the [20] direction. There are intra‐chain and inter‐chain hydrogen bonds in the structures, the former providing cohesion of the linear arrays and the latter promoting the formation of broad planes parallel to (010).     

Linear hydrogen‐bonded molecular tapes in the cocrystals of squaric acid with 4,4′‐dipyridylacetylene and 1,2‐bis(4‐pyridyl)ethylene

The title compounds, 4,4′‐(ethyne‐1,2‐diyl)­dipyridinium bis(squarate), C₁₂H₁₀N₂²⁺·2C₄HO₄^?, and 4,4′‐(ethene‐1,2‐diyl)­dipyridinium bis­(squarate), C₁₂H₁₂N₂²⁺·2C₄HO₄^?, are isomorphous and crystallize in space group P. The cocrystals contain linear hydrogen‐bonded molecular tape structures along the [120] direction. The squarate monoanions form a ten‐membered dimer linked by two intermolecular O—H?O hydrogen bonds. Each component mol­ecule forms a segregated stack along the c axis. The bond lengths of the squarate monoanion indicate delocalization of the enolate anion.     

Inclusion of chlorophenols by 4,4′‐(cyclohexane‐1,1‐diyl)diphenol: structures and kinetics of decomposition

The structures of the inclusion compounds 4,4′‐(cyclohexane‐1,1‐diyl)diphenol–3‐chlorophenol (1/1) and 4,4′‐(cyclohexane‐1,1‐diyl)diphenol–4‐chlorophenol (1/1), both C₁₈H₂₀O₂·C₆H₅ClO, are isostructural with respect to the host molecule and are stabilized by extensive host–host, host–guest and guest–host hydrogen bonding. The packing is characterized by layers of host and guest molecules. The kinetics of thermal decomposition follow the R2 contracting‐area model, kt = [1 − (1 − α)^½], and yield activation energies of 105 (8) and 96 (8) kJ mol⁻¹, respectively.     

The interplay of solvation,molecular conformation and supramolecular assembly in 1,1′‐({[(ethane‐1,2‐diyl)dioxy](1,2‐phenylene)}bis(methanylylidene))bis(thiosemicarbazide) and its N,N‐dimethylformamide disolvate

The wide diversity of applications of thiosemicarbazones and bis(thiosemicarbazones) has seen them used as anticancer and antitubercular agents, and as ligands in metal complexes designed to act as site‐specific radiopharmaceuticals. Molecules of 1,1′‐({[(ethane‐1,2‐diyl)dioxy](1,2‐phenylene)}bis(methanylylidene))bis(thiosemicarbazide) {alternative name: 2,2′‐[ethane‐1,2‐diylbis(oxy)]dibenzaldehyde bis(thiosemicarbazide)}, C₁₈H₂₀N₆O₂S₂, (I), lie across twofold rotation axes in the space group C2/c, with an O—C—C—O torsion angle of −59.62 (13)° and a trans‐planar arrangement of the thiosemicarbazide fragments relative to the adjacent aryl rings. The molecules of (I) are linked by N—H...S hydrogen bonds to form sheets containing R²₄(38) rings and two types of R²₂(8) ring. In the N,N‐dimethylformamide disolvate, C₁₈H₂₀N₆O₂S₂·2C₃H₇NO, (II), the independent molecular components all lie in general positions, but one of the solvent molecules is disordered over two sets of atomic sites having occupancies of 0.839 (3) and 0.161 (3). The O—C—C—O torsion angle in the ArOCH₂CH₂OAr component is −75.91 (14)° and the independent thiosemicarbazide fragments both adopt a cis‐planar arrangement relative to the adjacent aryl rings. The ArOCH₂CH₂OAr components in (II) are linked by N—H...S hydrogen bonds to form deeply puckered sheets containing R²₂(8), R²₄(8) and two types of R²₂(38) rings, and which contain cavities which accommodate all of the solvent molecules in the interior of the sheets. Comparisons are made with some related compounds.     

A three‐dimensional ZnII coordination framework: poly[[μ2‐(E)‐1,2‐bis(pyridin‐4‐yl)ethene][μ4‐(E)‐2,2′‐(diazene‐1,2‐diyl)dibenzoato][μ2‐(E)‐2,2′‐(diazene‐1,2‐diyl)dibenzoato]dizinc(II)]

In the title coordination polymer, [Zn₂(C₁₄H₈N₂O₄)₂(C₁₂H₁₀N₂)]_n, the asymmetric unit contains one Zn^II cation, two halves of 2,2′‐(diazene‐1,2‐diyl)dibenzoate anions (denoted L²⁻) and half of a 1,2‐bis(pyridin‐4‐yl)ethene ligand (denoted bpe). The three ligands lie across crystallographic inversion centres. Each Zn^II centre is four‐coordinated by three O atoms of bridging carboxylate groups from three L²⁻ ligands and by one N atom from a bpe ligand, forming a tetrahedral coordination geometry. Two Zn^II atoms are bridged by two carboxylate groups of L²⁻ ligands, generating a [Zn₂(CO₂)₂] ring. Each loop serves as a fourfold node, which links its four equivalent nodes via the sharing of four L²⁻ ligands to form a two‐dimensional [Zn₂L₄]_n net. These nets are separated by bpe ligands acting as spacers, producing a three‐dimensional framework with a 4⁶6⁴ topology. Powder X‐ray diffraction and solid‐state photoluminescence were also measured.     

Hydrogen‐bonded supramolecular networks of N,N′‐bis(4‐pyridylmethyl)oxalamide and 4,4′‐{[oxalylbis(azanediyl)]dimethylene}dipyridinium dinitrate

The molecule of N,N′‐bis(4‐pyridylmethyl)oxalamide, C₁₄H₁₄N₄O₂, (I) or 4py‐ox, has an inversion center in the middle of the oxalamide group. Adjacent molecules are then linked through intermolecular N—H...N and C—H...O hydrogen bonds, forming an extended supramolecular network. 4,4′‐{[Oxalylbis(azanediyl)]dimethylene}dipyridinium dinitrate, C₁₄H₁₆N₄O₂²⁺·2NO₃⁻, (II), contains a diprotonated 4py‐ox cation and two nitrate counter‐anions. Each nitrate ion is hydrogen bonded to four 4py‐ox cations via intermolecular N—H...O and C—H...O interactions. Adjacent 4py‐ox cations are linked through weak C—H...O hydrogen bonding between an α‐pyridinium C atom and an oxalamide O atom, forming a two‐dimensional extended supramolecular network.     

4,4′‐(Azinodimethylene)dipyridinium bis(tetrafluoroborate) and 4‐[(4‐pyridylmethylene)hydrazonomethyl]pyridinium perchlorate: two different hydrogen‐bonding motifs

In the crystal structures of the title compounds, C₁₂H₁₂N₄²⁺·2BF₄⁻, (I), and C₁₂H₁₁N₄⁺·ClO₄⁻, (II), respectively, infinite two‐ and one‐dimensional architectures are built up via N—H...F [in (I)] and conventional N—H...N [in (II)] hydrogen bonding. The N—N single bond in (I) lies on a crystallographic centre of symmetry; as a result, the two pyridinium rings are parallel. In (II), the pyridinium and pyridyl ring planes are inclined with a dihedral angle of 14.45 (3)°.     

Hydrogen bonding in 4‐nitrobenzene‐1,2‐diamine and two hydrohalide salts

The structures of 4‐nitrobenzene‐1,2‐diamine [C₆H₇N₃O₂, (I)], 2‐amino‐5‐nitroanilinium chloride [C₆H₈N₃O₂⁺·Cl⁻, (II)] and 2‐amino‐5‐nitroanilinium bromide monohydrate [C₆H₈N₃O₂⁺·Br⁻·H₂O, (III)] are reported and their hydrogen‐bonded structures described. The amine group para to the nitro group in (I) adopts an approximately planar geometry, whereas the meta amine group is decidedly pyramidal. In the hydrogen halide salts (II) and (III), the amine group meta to the nitro group is protonated. Compound (I) displays a pleated‐sheet hydrogen‐bonded two‐dimensional structure with R₂²(14) and R₄⁴(20) rings. The sheets are joined by additional hydrogen bonds, resulting in a three‐dimensional extended structure. Hydrohalide salt (II) has two formula units in the asymmetric unit that are related by a pseudo‐inversion center. The dominant hydrogen‐bonding interactions involve the chloride ion and result in R₄²(8) rings linked to form a ladder‐chain structure. The chains are joined by N—H...Cl and N—H...O hydrogen bonds to form sheets parallel to (010). In hydrated hydrohalide salt (III), bromide ions are hydrogen bonded to amine and ammonium groups to form R₄²(8) rings. The water behaves as a double donor/single acceptor and, along with the bromide anions, forms hydrogen bonds involving the nitro, amine, and ammonium groups. The result is sheets parallel to (001) composed of alternating R₅⁵(15) and R₆⁴(24) rings. Ammonium N—H...Br interactions join the sheets to form a three‐dimensional extended structure. Energy‐minimized structures obtained using DFT and MP2 calculations are consistent with the solid‐state structures. Consistent with (II) and (III), calculations show that protonation of the amine group meta to the nitro group results in a structure that is about 1.5 kJ mol⁻¹ more stable than that obtained by protonation of the para‐amine group. DFT calculations on single molecules and hydrogen‐bonded pairs of molecules based on structural results obtained for (I) and for 3‐nitrobenzene‐1,2‐diamine, (IV) [Betz & Gerber (2011). Acta Cryst. E 67 , o1359] were used to estimate the strength of the N—H...O(nitro) interactions for three observed motifs. The hydrogen‐bonding interaction between the pairs of molecules examined was found to correspond to 20–30 kJ mol⁻¹.     

The three‐dimensional coordination polymer poly[[aqua[μ4‐2,2′‐(diazene‐1,2‐diyl)dibenzoato]lead(II)] 1,2‐bis(pyridin‐4‐yl)ethylene hemisolvate]

A novel three‐dimensional coordination polymer, {[Pb(C₁₄H₈N₂O₄)(H₂O)]·0.5C₁₂H₁₀N₂}_n, has been synthesized by hydrothermal reaction of Pb(OAc)₂·3H₂O (OAc is acetate), 2,2′‐(diazene‐1,2‐diyl)dibenzoic acid (H₂L) and 1,2‐bis(pyridin‐4‐yl)ethylene (bpe). The asymmetric unit contains a crystallographically independent Pb^II cation, one L²⁻ ligand, an aqua ligand and half a bpe molecule. Each Pb^II centre is seven‐coordinated by six O atoms of bridging–chelating carboxylate groups from L²⁻ ligands and by one O atom from a coordinated water molecule. The Pb^II cations are bridged by L²⁻ ligands, forming [PbO₂]_n chains along the a axis. These chains are further connected by L²⁻ ligands along the b and c axes to give a three‐dimensional framework with a 4¹²6³ topology. The channel voids are occupied by bpe molecules.     

Electrochemical Reduction of 4,4′‐(2,2,2‐Trichloroethane‐1,1‐diyl)‐ bis(chlorobenzene) (DDT) and 4,4′‐(2,2‐Dichloroethane‐1,1‐diyl)‐ bis(chlorobenzene) (DDD) at Carbon Cathodes in Dimethylformamide

In dimethylformamide containing tetramethylammonium tetrafluoroborate, cyclic voltammograms for reduction of 4,4′‐(2,2,2‐trichloroethane‐1,1‐diyl)bis(chlorobenzene) (DDT) at a glassy carbon cathode exhibit five waves, whereas three waves are observed for the reduction of 4,4′‐(2,2‐dichloroethane‐1,1‐diyl)bis(chlorobenzene) (DDD). Bulk electrolyses of DDT and DDD afford 4,4′‐(ethene‐1,1‐diyl)bis(chlorobenzene) (DDNU) as principal product (67–94%), together with 4,4′‐(2‐chloroethene‐1,1‐diyl)bis(chlorobenzene) (DDMU), 1‐chloro‐4‐styrylbenzene, and traces of both 1,1‐diphenylethane and 4,4′‐(ethane‐1,1‐diyl)bis(chlorobenzene) (DDO). For electrolyses of DDT and DDD, the coulometric n values are essentially 4 and 2, respectively. When DDT is reduced in the presence of a large excess of D₂O, the resulting DDNU and DDMU are almost fully deuterated, indicating that reductive cleavage of the carbon–chlorine bonds of DDT is a two‐electron process that involves carbanion intermediates. A mechanistic scheme is proposed to account for the formation of the various products.     

A dinuclear complex of cobalt(II) with 2,2′‐(1,4‐butane­diyl)­dibenz­imidazole

The title complex, [μ‐2,2′‐(1,4‐butane­diyl)di‐1H‐benzimidazole‐κ²N³:N^3′]bis{[2,2′‐(1,4‐butane­diyl)di‐1H‐benzimidazole‐κ²N³,N^3′](nitrato‐κO)cobalt(II)} dinitrate ethanol disolvate, [Co₂(NO₃)₂(C₁₈H₁₈N₄)₃](NO₃)₂·2C₂H₆O, was obtained from self‐assembly of cobalt(II) nitrate with 2,2′‐(1,4‐butane­diyl)dibenzimidazole (L). The complex molecule lies about an inversion centre and the flexible L ligands act in both bridging and chelating modes to form a dinuclear complex with unanticipated nine‐membered chelate rings. The unique uncoordinated nitrate anion is linked to the cation by pairs of N—H⋯O hydrogen bonds, which determine the overall cation conformation. Cation–anion sets are then linked by a further N—H⋯O hydrogen bond to generate a chain along [010]. Chains are linked by C—H⋯O hydrogen bonds to form sheets in the (100) plane.     

Weak hydrogen bonding and fluorous interactions in the chloride and bromide salts of 4‐[(2,2,3,3‐tetrafluoropropoxy)methyl]pyridinium

Neutralization of 4‐[(2,2,3,3‐tetrafluoropropoxy)methyl]pyridine with hydrohalo acids HX (X = Cl and Br) yielded the pyridinium salts 4‐[(2,2,3,3‐tetrafluoropropoxy)methyl]pyridinium chloride, C₉H₁₀F₄NO⁺·Cl⁻, (1), and 4‐[(2,2,3,3‐tetrafluoropropoxy)methyl]pyridinium bromide, C₉H₁₀F₄NO⁺·Br⁻, (2), both carrying a fluorous side chain at the para position of the pyridinium ring. Single‐crystal X‐ray diffraction techniques revealed that (1) and (2) are isomorphous. The halide anions accept four hydrogen bonds from N—H, ortho‐C—H and CF₂—H groups. Two cations and two anions form a centrosymmetric dimeric building block, utilizing complimentary N—H…X …H—Csp ³ connections. These dimers are further crosslinked, utilizing another complimentary Csp ²—H…X …H—Csp ² connection. The pyridinium rings are π‐stacked, forming columns running parallel to the a axis that make angles of ca 44–45° with the normal to the pyridinium plane. There are also supramolecular C—H…F—C interactions, namely bifurcated C—H…F and bifurcated C—F…H interactions; additionally, one type II C—F…F—C halogen bond has been observed.     

syn and anti conformations in 2‐hydroxy‐5‐[(E)‐(4‐nitrophenyl)diazenyl]benzoic acid and two related salts

The crystal structures of 2‐hydroxy‐5‐[(E)‐(4‐nitrophenyl)diazenyl]benzoic acid, C₁₃H₉N₃O₅, (I), ammonium 2‐hydroxy‐5‐[(E)‐phenyldiazenyl]benzoate, NH₄⁺·C₁₃H₉N₂O₃⁻, (II), and sodium 2‐hydroxy‐5‐[(E)‐(4‐nitrophenyl)diazenyl]benzoate trihydrate, Na⁺·C₁₃H₈N₃O₅⁻·3H₂O, (III), have been determined using single‐crystal X‐ray diffraction. In (I) and (III), the phenyldiazenyl and carboxylic acid/carboxylate groups are in an anti orientation with respect to each other, which is in accord with the results of density functional theory (DFT) calculations, whereas in (II), the anion adopts a syn conformation. In (I), molecules form slanted stacks along the [100] direction. In (II), anions form bilayers parallel to (010), the inner part of the bilayers being formed by the benzene rings, with the –OH and –COO⁻ substituents on the bilayer surface. The NH₄⁺ cations in (II) are located between the bilayers and are engaged in numerous N—H...O hydrogen bonds. In (III), anions form layers parallel to (001). Both Na⁺ cations have a distorted octahedral environment, with four octahedra edge‐shared by bridging water O atoms, forming [Na₄(H₂O)₁₂]⁴⁺ units.     

1,1′‐Di(hydrazinocarbonylmethyl)‐2,2′‐biimidazole monohydrate and 1,1′‐di[2‐(hydrazinocarbonyl)ethyl]‐2,2′‐bi­imidazole

The crystal structures of the title compounds, alternatively called 2,2′‐(2,2′‐bi­imid­azole‐1,1′‐diyl)­diaceto­hydra­zide monohydrate, C₁₀H₁₄N₈O₂·H₂O, (I), and 3,3′‐(2,2′‐bi­imid­azole‐1,1′‐diyl)­dipropion­o­hydra­zide, C₁₂H₁₈N₈O₂, (II), respectively, have been determined. The mol­ecules consist of half‐mol­ecule asymmetric units related by a twofold rotation in (I) and by a center of inversion in (II). The imidazole rings of both mol­ecules crystallize in a nearly coplanar fashion [dihedral angles of 5.91 (3) and 0.0 (1)° for (I) and (II), respectively]. Both planar hy­dra­zinocarbonylalkyl substituents are essentially planar and assume the E orientation.     

The diprotonated 2,2‐(propane‐1,3‐di­yl)bis­(1,1,3,3‐tetra­methyl­guanidinium) cation: packing and conformational changes

Subject to packing with different anions, the title cation undergoes various conformational changes with significantly different N—C—C—C torsion angles, as well as different angles between the NCN₂ guanidine planes. The 2,2‐(propane‐1,3‐di­yl)bis­(1,1,3,3‐tetra­methyl­guanidinium) salts reported here, viz. the dibromide, C₁₃H₃₂N₆²⁺·2Br⁻, the tetra­phenyl­borate chloride, C₁₃H₃₂N₆²⁺·C₂₄H₂₀B⁻·Cl⁻, the tetra­chloro­mercurate, (C₁₃H₃₂N₆)[HgCl₄], and the bis­(trifluoro­methanesulfonate), C₁₃H₃₂N₆²⁺·2CF₃SO₃⁻, are dominated by strong inter­molecular N—H⋯X hydrogen bonds, which form different packing patterns.     

A novel CdII coordination polymer with 1,1′‐(1,4‐butanediyl)diimidazole

The novel title Cd^II coordination polymer, poly­[[di­chlorocad­mium(II)]‐di‐μ‐1,1′‐(1,4‐butane­diyl)­di­imidazole], [CdCl₂(C₁₀H₁₄N₄)₂]_n, (I), was obtained by reaction of CdCl₂·2.5H₂O and 1,1′‐(1,4‐butane­diyl)diimidazole (hereafter L). In (I), each L molecule coordinates to two Cd^II cations through its two aromatic N atoms, thus acting as a bridging bidentate ligand. The Cd^II cations, which lie on the inversion centre, are bridged by four L molecules to form a two‐dimensional (4,4)‐network. The two‐dimensional square‐grid sheets are superimposed in an offset fashion.     

Triclinic and monoclinic polymorphs of meso‐(E,E)‐1,1′‐[1,2‐bis(4‐chlorophenyl)ethane‐1,2‐diyl]bis(phenyldiazene): the high‐yield synthesis of an unexpected product,concomitant polymorphism and configurational disorder

Pyrazolidine‐3,5‐diones and their derivatives exhibit a wide range of biological activities. Seeking to explore the effect of combining a hydrocarbyl ring substituent, as present in sulfinpyrazone (used to treat gout), with a chlorinated aryl ring, as present in muzolimine (a diuretic), we explored the reaction between 1‐phenylpyrazolidine‐3,5‐dione and 4‐chlorobenzaldehyde under mildly basic conditions in the expectation of producing the simple condensation product 4‐(4‐chlorobenzylidene)‐1‐phenylpyrazolidine‐3,5‐dione. However, the reaction product proved to be meso‐(E,E)‐1,1′‐[1,2‐bis(4‐chlorophenyl)ethane‐1,2‐diyl]bis(phenyldiazene), C₂₆H₂₀Cl₂N₄, and a tentative mechanism is proposed. Crystallization from ethanol produces two concomitant polymorphs, i.e. a triclinic form, (I), in the space group P, and a monoclinic form, (II), in the space group C2/c. In both polymorphs, the molecules lie across centres of inversion, but in (II), the molecules are subject to whole‐molecule disorder equivalent to configurational disorder with occupancies of 0.6021 (19) and 0.3979 (19). There are no hydrogen bonds in the crystal structure of polymorph (I), but the molecules of polymorph (II) are linked by C—H...π(arene) hydrogen bonds into complex chains, which are further linked into sheets by C—H...N interactions.     

Secondary interactions in the iso­morphous compounds 2,6‐bis­(chloro­methyl)­pyridinium chloride and 2,6‐bis­(bromo­methyl)­pyridinium bromide

The title compounds, C₇H₈Cl₂N⁺·Cl⁻ and C₇H₈Br₂N⁺·Br⁻, are isomorphous. In the crystal packing, layers parallel to the ac plane are formed by a classical N⁺—H⋯X⁻ hydrogen bond (X = halogen) and two X⋯X contacts. A third X⋯X contact links the layers, and a fourth, which is however very long, completes a ladder‐like motif of halogen atoms. Hydro­gen bonds of the form C—H⋯X play at best a subordinate role in the packing.     

4,4′‐(Azino­di­methyl­ene)­dipyridinium chloranilate di­chloro­methane disolvate

The di­chloro­methane disolvate of 4,4′‐(azino­di­methyl­ene)­dipyridinium chloranilate, C₁₂H₁₂N₄²⁺·C₆Cl₂O₄²⁻·2CH₂Cl₂, con­sists of one‐dimensional hydrogen‐bonded molecular tapes that propagate along the [10] direction. Both cations and anions lie across centres of inversion. The molecular tapes are planar but do not stack in the expected segregated manner, instead having chloranilate anions sandwiched between azine groups.