(2‐Aminopyrimidine‐κN1)aqua(pyridine‐2,6‐dicarboxylato‐κ3O2,N,O6)copper(II): X‐ray and DFT calculated structure

In the title compound, [Cu(C₇H₃N₂O₄)(C₄H₅N₂)(H₂O)], (I), pyridine‐2,6‐dicarboxylate (pydc²⁻), 2‐aminopyrimidine and aqua ligands coordinate the Cu^II centre through two N atoms, two carboxylate O atoms and one water O atom, respectively, to give a nominally distorted square‐pyramidal coordination geometry, a common arrangement for copper complexes containing the pydc²⁻ ligand. Because of the presence of Cu...X_bridged contacts (X = N or O) between adjacent molecules in the crystal structures of (I) and three analogous previously reported compounds, and the corresponding uncertainty about the effective coordination number of the Cu^II centre, density functional theory (DFT) calculations were used to elucidate the degree of covalency in these contacts. The calculated Wiberg and Mayer bond‐order indices reveal that the Cu...O contact can be considered as a coordination bond, whereas the amine group forming a Cu...N contact is not an effective participant in the coordination environment.     

Poly[bis[μ2‐3‐(pyridin‐4‐yl)benzoato‐κ3N:O,O′]lead(II)]

In the title compound, [Pb(C₁₂H₈NO₂)₂]_n, the Pb atom sits on a crystallographic C₂ axis and is six‐coordinate, ligated by two chelating carboxylate groups from two 3‐(pyridin‐4‐yl)benzoate (L) ligands and by two N atoms from another two ligands. Each ligand bridges two Pb^II centres, extending the structure into a corrugated two‐dimensional (4,4) net. The ligand L is conformationally chiral, with a torsion angle of 27.9 (12)° between the planes of its two rings. The torsion angle has the same sense throughout the structure, so that the extended two‐dimensional polymer is homochiral. Investigation of the thermal stability shows that the network is stable up to 613 K. In the absence of any stereoselective factor in the preparation of the compound, the enantiomeric purity of the crystal studied, based only on the torsional conformation of the ligand, implies that the bulk sample is a racemic conglomerate.     

Copper(II) bromide,nitrate and perchlorate complexes with sterically demanding N‐(6‐methylpyridin‐2‐yl)acetamide ligands

Functionalized acid amides are widely used in biology, medicine, environmental chemistry and many other areas. Among them, pyridine‐substituted amides, in particular N‐(pyridin‐2‐yl)acetamide and its derivatives, play an important role due to their excellent chelating properties. The donor properties of these ligands can be effectively modified by introducing electron‐donating substituents (e.g. alkyl groups) into the heterocycle. On the other hand, substituents in the α‐position of the pyridine ring can create steric hindrance, which significantly influences the coordination number and geometry. To achieve a better understanding of these effects, copper(II) complexes with sterically demanding N‐(6‐methylpyridin‐2‐yl)acetamide ligands (L ) and monoanions of different size, shape and coordination ability have been chosen as model compounds. The crystal structures of three new compounds, bromidobis[N‐(6‐methylpyridin‐2‐yl‐κN )acetamide‐κO ]copper(II) bromide, [CuBr(C₈H₁₀N₂O)]Br, (I), aquabis[N‐(6‐methylpyridin‐2‐yl‐κN )acetamide‐κO ]copper(II) dinitrate, [Cu(C₈H₁₀N₂O)(H₂O)](NO₃)₂, (II), and aquabis[N‐(6‐methylpyridin‐2‐yl‐κN )acetamide‐κO ]copper(II) bis(perchlorate), [Cu(C₈H₁₀N₂O)(H₂O)](ClO₄)₂, (III), have been determined by single‐crystal X‐ray diffraction analysis. It has been shown that the presence of the 6‐methyl group results in either a distorted square‐pyramidal or a distorted trigonal–bipyramidal coordination geometry around the Cu^II centres instead of the typical octahedral geometry observed when the methyl substituent is absent or occupies any other position on the pyridine ring. Moreover, due to the steric hindrance provided by the L ligands, only the bromide ligand, the smallest of the series, enters into the first coordination sphere of the Cu^II ion in (I). In (II) and (III), the vacant coordination site of the Cu^II ion is occupied by a water molecule, while the nitrate and perchlorate anions are not involved in coordination to the metal centre. The structures of (I)–(III) are characterized by the presence of one‐dimensional infinite chains formed by hydrogen bonds of the types N—H…Br [in (I)], N—H…O and O—H…O [in (II) and (III)] between the amide groups of the L ligands, the coordinated water molecules and the uncoordinated anions. The hydrogen‐bonded chains are further interconnected through π–π stacking interactions between the pyridine rings of the L ligands, with approximate interplanar separations of 3.5–3.6 Å.     

Crystallographic report: Bis(acetato‐O,O′){4‐[N,N‐bis(2‐cyanoethyl)amino] pyridine}bis(methanol)cadmium(II), [Cd(C11H12N4) (CH3CO2)2(CH3OH)2]

The cadmium atom is coordinated in distorted pentagonal bipyramidal geometry by the pyridine‐nitrogen atom of the 4‐[N,N‐bis(2‐cyanoethyl)amino]pyridine ligand, two oxygen atoms of two methanol molecules and four oxygen atoms of two acetate groups. Copyright © 2005 John Wiley & Sons, Ltd.     

Crystallographic report: Bis[N,N‐dimethyl‐N′‐(pyrid‐2‐ylmethyl)‐ethylenediamine]zinc(II) diperchlorate

The zinc(II) atom in the centrosymmetric complex is in a distorted N₆ octahedral geometry defined by two tridentate ligands. Copyright © 2004 John Wiley & Sons, Ltd.     

Two cobalt(II) supramolecular isomers based on N,N′‐bis(pyridin‐3‐yl)oxalamide induced by the molecular orientation of lattice DMF molecules

Supramolecular isomerism for coordination networks refers to the existence of different architectures having the same building blocks and identical stoichiometries. For a given building block, different arrangements can lead to the formation of a series of supramolecular isomers. Two one‐dimensional Co^II coordination polymers based on N,N′‐bis(pyridin‐3‐yl)oxalamide (BPO), both catena‐poly[[[dichloridocobalt(II)]‐bis[μ‐N,N′‐bis(pyridin‐3‐yl)oxalamide‐κ²N:N′]] dimethylformamide disolvate], {[CoCl₂(C₁₂H₁₀N₄O₂)₂]·2C₃H₇NO}_n, have been assembled by the solvothermal method. Single‐crystal X‐ray diffraction analyses reveal that the two compounds are supramolecular isomers, the isomerism being induced by the orientation of the dimethylformamide (DMF) molecules in the crystal lattice.     

(Hexafluorosilicato‐κ2F,F′)bis(1,10‐phenanthroline‐κ2N,N′)zinc(II) methanol monosolvate

The title compound, [Zn(SiF₆)(C₁₂H₈N₂)₂]·CH₃OH, contains a neutral heteroleptic tris‐chelate Zn^II complex, viz. [Zn(SiF₆)(phen)₂] (phen is 1,10‐phenanthroline), exhibiting approximate molecular C₂ point‐group symmetry. The Zn^II cation adopts a severely distorted octahedral coordination. As far as can be ascertained, the title complex represents the first structurally characterized example of a Zn^II complex bearing a bidentate‐bound hexafluorosilicate ligand. A density functional theory study of the isolated [Zn(SiF₆)(phen)₂] complex was undertaken to reveal the influence of crystal packing on the molecular structure of the complex. In the crystal structure, the methanol solvent molecule forms a hydrogen bond to one F atom of the hexafluorosilicate ligand. The hydrogen‐bonded assemblies so formed are tightly packed in the crystal, as indicated by a high packing coefficient (74.1%).     

Two molybdenum pentacarbonyl complexes with electroneutral phosphane ligands: [bis(morpholin‐4‐yl)(pentafluoroethyl)phosphane‐κP]pentacarbonylmolybdenum(0) and pentacarbonyl[(pentafluoroethyl)bis(piperidin‐1‐yl)phosphane‐κP]molybdenum(0)

The crystal structures of the title compounds, [Mo{(C₄H₈NO)₂P(C₂F₅)}(CO)₅], (1a), and [Mo{(C₅H₁₀N)₂P(C₂F₅)}(CO)₅], (2a), were determined as part of a larger project that focuses on the synthesis and coordination chemistry of phosphane ligands possessing moderate (electroneutral, i.e. neither electron‐rich nor electron‐deficient) electronic characteristics. Both complexes feature a slightly distorted octahedral geometry at the metal center, due to the electronic and steric repulsions between two of the four equatorial CO groups and the pentafluoroethyl group attached to the phosphane ligand. Bond length and angle data for (1a) and (2a) support the conclusion that the free phosphane ligands are electroneutral. For complex (1a), the Mo—P, Mo—C_ax and Mo—C_eq(ave) bond lengths are 2.5063 (5), 2.018 (2) and 2.048 (2) Å, respectively, and for complex (2a) these values are 2.5274 (5), 2.009 (3) and 2.050 (3) Å, respectively. Geometric data for (1a) and (2a) are compared with similar data reported for analogous Mo(CO)₅ complexes.     

Crystal structure and photoluminescence properties of a new monomeric copper(II) complex: bis(3‐{[(3‐hydroxypropyl)imino]methyl}‐4‐nitrophenolato‐κ3O,N,O′)copper(II)

Copper(II)–Schiff base complexes have attracted extensive interest due to their structural, electronic, magnetic and luminescence properties. The title novel monomeric Cu^II complex, [Cu(C₁₀H₁₁N₂O₄)₂], has been synthesized by the reaction of 3‐{[(3‐hydroxypropyl)imino]methyl}‐4‐nitrophenol (H₂L ) and copper(II) acetate monohydrate in methanol, and was characterized by elemental analysis, UV and IR spectroscopies, single‐crystal X‐ray diffraction analysis and a photoluminescence study. The Cu^II atom is located on a centre of inversion and is coordinated by two imine N atoms, two phenoxy O atoms in a mutual trans disposition and two hydroxy O atoms in axial positions, forming an elongated octahedral geometry. In the crystal, intermolecular O—H…O hydrogen bonds link the molecules to form a one‐dimensional chain structure and π–π contacts also connect the molecules to form a three‐dimensional structure. The solid‐state photoluminescence properties of the complex and free H₂L have been investigated at room temperature in the visible region. When the complex and H₂L are excited under UV light at 349 nm, the complex displays a strong green emission at 520 nm and H₂L displays a blue emission at 480 nm.     

Two new zinc(II) and mercury(II) complexes based on N,N′‐(cyclohexane‐1,2‐diylidene)bis(4‐fluorobenzohydrazide): synthesis,crystal structures and antibacterial activities

Reaction of N,N′‐(cyclohexane‐1,2‐diylidene)bis(4‐fluorobenzohydrazide), C₂₀H₁₈F₂N₄O₂, ( L^F ), with zinc chloride and mercury(II) chloride produced different types and shapes of neutral coordination complexes, namely, dichlorido[N,N′‐(cyclohexane‐1,2‐diylidene)bis(4‐fluorobenzohydrazide)‐κ²N,O]zinc(II), [ZnCl₂(C₂₀H₁₈F₂N₄O₂)], ( 1 ), and dichlorido[N,N′‐(cyclohexane‐1,2‐diylidene)bis(4‐fluorobenzohydrazide)‐κ⁴O,N,N′,O′]mercury(II), [HgCl₂(C₂₀H₁₈F₂N₄O₂)], ( 2 ). The organic ligand and its metal complexes are characterized using various techniques: IR, UV–Vis and nuclear magnetic resonance (NMR) spectroscopies, in addition to powder X‐ray diffraction (PXRD), single‐crystal X‐ray crystallography and microelemental analysis. Depending upon the data from these analyses and measurements, a typical tetrahedral geometry was confirmed for zinc complex ( 1 ), in which the Zn^II atom is located outside the bis(benzhydrazone) core. The Hg^II atom in ( 2 ) is found within the core and has a common octahedral structure. The in vitro antibacterial activities of the prepared compounds were evaluated against two different bacterial strains, i.e. gram positive Bacillus subtilis and gram negative Pseudomonas aeruginosa bacteria. The prepared compounds exhibited differentiated growth‐inhibitory activities against these two bacterial strains based on the difference in their lipophilic nature and structural features.     

Structure of tetra[β‐(1,2,4‐triazole‐l‐yl) propiophenone] dichloro nickel(II) solvate hexahydrate complex: [NiCl2(C2H2N3CH2CH2‐COPh)4]·6H2O

The mononuclear complex, [NiCl₂ (trzCH₂CH₂COPh)₄]·6H₂O (trz =1,2,4‐triazole), was synthesized and its structure was determined by single crystal X‐ray determination. It crystallizes in the monoclinic system, space group P2₁/c, with lattice parameters: a = 0.80391(2) nm, b = 1.08215(2) tun, c = 2.90133(2) nm, β = 94.792 (1)° and Z = 2. Each nickel atom is coordinated by four N atoms of triazole from four β‐(1,2,4‐triazole‐1‐yl)propiophenone ligands and two chloride anions in trans arrangement with octahedral coordination geometry. In addition to the coordinating nickel complex, there are six uncoordinated water molecules. The Ni‐Cl distance is 0.24865(8) nm and the Ni‐N distances are in the range of 0.2072(2) to 0.2099(2) nm, respectively. In the solid state, the title compound forms three dimensional network structure through hydrogen bonds. The intermolecular hydrogen bonds connect the [NiCl₂(C₂H₂N₃CH₂CH₂COPh)₄] and H₂O moieties. The deep green crystals were also examined by elemental analysis, FT‐IR and UV spectra, which are in agreement with the structural data.     

Intermolecular Pb…N interactions in lead(II) dimers producing a supramolecular two‐dimensional metal–organic compound: bis[μ2‐N′‐(2‐oxidobenzylidene)benzohydrazidato‐κ4O:O,N′,O′]dilead(II)

Aroylhydrazones of ortho‐hydroxy aldehydes are Schiff base ligands that typically coordinate as a chelate in an O,N,O′‐manner. Dinuclear complexes are normally observed, with the phenolate O atom acting as the bridging atom. The switchable protonation state of the tridentate N′‐(2‐hydroxybenzylidene)benzohydrazide (H₂sabhz) ligand can lead to variations in the resulting supramolecular structure. The title compound, [Pb₂(C₁₄H₁₀N₂O₂)₂], was prepared by the reaction of [Pb(OAc)₂]·3H₂O (OAc is acetate) with the benzoylhydrazone derivative of salicylaldehyde, i.e. H₂sabhz, in the presence of triethylamine in methanol. In the crystal structure, each Pb^II atom of the dimer has an NO₃ coordination environment, with one sabhz ligand coordinating in an O,N,O′‐manner and with the second sabhz ligand coordinating via the bridging phenolate O atom, since the dimers are located on a centre of inversion. It has been found that the dimers are connected by Pb…N interactions, resulting in a two‐dimensional supramolecular network which shows the [3².5²,3.5³] net topology. The s² electron pair of the Pb^II ion clearly influences the observed intermolecular interactions.     

Structure and Photosynthetic Mimicking of Bis（2,6—bis（benzimidazol—2—yl）pyridine）manganese（Ⅱ）

Mn(bzimpy)2(1)[bzimpy=2,6-bis(benzimidazol-2-yl)pyridine],a mononuclear manganese(Ⅱ）complex,was synthesized by the reaction of Mn(OOCMe)2 with bzimpy in absolute ethanol.The complex was structurally characterized by elemental analysis,cyclic voltammetry,and X-ray crystallography.In the complex,the manganese-nitrogen distances were different,and the geometry and the metal ion environment showed the distortion.The cyclic voltammetric measurements have been performed to assess its redox characteristics.The presence of oxidation wave at 0.62V and 0.081V vs.SCE or 0.8V and 1.0v vs.NHE suggested that this complex could catalyze the oxidation of water,therefore,simulate the water-oxidizing complex(WOC) of photosystem Ⅱ (PS Ⅱ).The measurements of photoreduction of 2,6-dichlorophenolindophenol (DCPIP),and oxygen evolution in the manganess-depleted and the comples 1-reconstituted PS Ⅱ preparations just support our conjecture.     

A novel crystal structure of {tris[4‐(1H‐pyrazol‐3‐yl‐κN2)‐3‐azabut‐3‐enyl]amine‐κN}iron(II) bis(tetrafluoridoborate) methanol monosolvate featuring a low‐spin configuration

Mononuclear complexes are good model systems for evaluating the effects of different ligand systems on the magnetic properties of iron(II) centres. A novel crystal structure of the title compound, [Fe(C₁₈H₂₄N₁₀)](BF₄)₂·CH₃OH, with one molecule of methanol per formula unit exhibits a strictly sixfold coordination sphere associated with a low‐spin configuration at the metal centre. The incorporated methanol solvent molecule promotes extended hydrogen‐bonding networks between the tetrafluoridoborate anions and the cationic units. A less constrained crystal structure regarding close contacts between the tetrafluoridoborate anions and the cationic units allows a spin transition which is inhibited in the previously published hydrate of the title compound.     

Synthesis,structure and in vitro cytotoxicity of platinum(II) complexes containing eugenol and a quinolin‐8‐ol‐derived chelator

The synthesis of potassium (η²‐4‐allyl‐2‐methoxyphenol)trichloridoplatinate(II), K[PtCl₃(C₁₀H₁₂O₂)], ( 1 ), starting from Zeise's salt and Ocimum sanctum L. oil has been optimized. Starting from ( 1 ), three new platinum(II) complexes, namely (η²‐4‐allyl‐2‐methoxyphenol)chlorido(2‐methylquinolin‐8‐olato‐κ²N ,O )platinum(II), ( 2 ), (η²‐4‐allyl‐2‐methoxyphenol)chlorido(5‐nitroquinolin‐8‐olato‐κ²N ,O )platinum(II), ( 3 ), and (η²‐4‐allyl‐2‐methoxyphenol)chlorido(5,7‐dichloroquinolin‐8‐olato‐κ²N ,O )platinum(II), [Pt(C₉H₄Cl₂NO)Cl(C₁₀H₁₂O₂)], ( 4 ), containing eugenol and a quinolin‐8‐ol derivative (R‐OQ), have been synthesized and characterized by elemental analyses, MS, IR, ¹H NMR and NOESY spectra. For ( 1 ) and ( 4 ), single‐crystal X‐ray diffraction studies were also carried out. Complexes ( 2 )–( 4 ) show good inhibiting abilities on three human cancer cell lines, i.e. KB, Hep‐G2 and LU, with IC₅₀ values of 1.42–17.8 µM . Complex ( 3 ) gives an impressively high activity against KB, Hep‐G2, LU and MCF‐7, with IC₅₀ values of 1.42–4.91 µM , which are much lower than those of cisplatin and some other platinum(II) complexes.     

Crystallographic report: Bis{4‐[N,N‐bis(2‐cyanoethyl)amino]pyridine} dichlorozinc(II)

In (C₁₁H₁₂N₄)₂ZnCl₂, the zinc(II) center is coordinated by the pyridine nitrogen atoms of two 4‐[N,N‐bis(2‐cyanoethyl)amino]pyridine ligands and two chlorine atoms in a tetrahedral geometry. Copyright © 2004 John Wiley & Sons, Ltd.     

Oxidative degradation of the organometallic iron(II) complex [Fe{bis[3‐(pyridin‐2‐yl)‐1H‐imidazol‐1‐yl]methane}(MeCN)(PMe3)](PF6)2: structure of the ligand decomposition product trapped via coordination to iron(II)

Iron is of interest as a catalyst because of its established use in the Haber–Bosch process and because of its high abundance and low toxicity. Nitrogen‐heterocyclic carbenes (NHC) are important ligands in homogeneous catalysis and iron–NHC complexes have attracted increasing attention in recent years but still face problems in terms of stability under oxidative conditions. The structure of the iron(II) complex [1,1′‐bis(pyridin‐2‐yl)‐2,2‐bi(1H‐imidazole)‐κN³][3,3′‐bis(pyridin‐2‐yl‐κN)‐1,1′‐methanediylbi(1H‐imidazol‐2‐yl‐κC²)](trimethylphosphane‐κP)iron(II) bis(hexafluoridophosphate), [Fe(C₁₇H₁₄N₆)(C₁₆H₁₂N₆)(C₃H₉P)](PF₆)₂, features coordination by an organic decomposition product of a tetradentate NHC ligand in an axial position. The decomposition product, a C—C‐coupled biimidazole, is trapped by coordination to still‐intact iron(II) complexes. Insights into the structural features of the organic decomposition products might help to improve the stability of oxidation catalysts under harsh conditions.     

Effect of pH on the charge‐assisted hydrogen‐bonded assembly of the anionic [Cu(oxalate)2]2− building unit and N,N′‐ditopic cations

By the solvothermal reaction under acidic conditions of Cu(NO₃)₂·3H₂O, Na₂C₂O₄ and the N,N′‐ditopic organic coligands 1‐(pyridin‐4‐yl)piperazine (ppz) and 1,2‐bis(pyridin‐4‐yl)ethane (bpa), two novel anionic copper(II) coordination compounds were obtained, namely the one‐dimensional coordination polymer catena‐poly[4‐(pyridin‐1‐ium‐4‐yl)piperazin‐1‐ium [[(oxalato‐κ²O¹,O²)copper(II)]‐μ‐oxalato‐κ³O¹,O²:O^1′]], {(C₉H₁₅N₃)[Cu(C₂O₄)₂)]}_n or {(H₂ppz)[Cu(C₂O₄)₂]}_n, (I), and the discrete ionic complex 4,4′‐(ethane‐1,2‐diyl)dipyridinium bis(oxalato‐κ²O¹,O²)copper(II), (C₁₂H₁₄N₂)[Cu(C₂O₄)₂] or (H₂bpa)[Cu(C₂O₄)₂], (II). The products were characterized by single‐crystal X‐ray diffraction, elemental analysis, powder X‐ray diffraction, thermogravimetric analyses and UV and IR spectroscopic techniques. The [Cu(C₂O₄)₂]²⁻ units for (I) and (II) are stabilized by H₂ppz²⁺ and H₂bpa²⁺ cations, respectively, via charge‐assisted hydrogen bonds. Also, a study of the pH‐controlled synthesis of this system shows that (I) was obtained at pH values of 2–4. When using bpa, a two‐dimensional square‐grid network of [Cu(C₂O₄)(bpa)]_n was obtained at a pH of 4. This indicates that the pH of the reaction also plays a key role in the structural assembly and coordination abilities of oxalate and N,N′‐ditopic coligands.     

A three‐dimensional ZnII coordination framework: poly[[μ2‐(E)‐1,2‐bis(pyridin‐4‐yl)ethene][μ4‐(E)‐2,2′‐(diazene‐1,2‐diyl)dibenzoato][μ2‐(E)‐2,2′‐(diazene‐1,2‐diyl)dibenzoato]dizinc(II)]

In the title coordination polymer, [Zn₂(C₁₄H₈N₂O₄)₂(C₁₂H₁₀N₂)]_n, the asymmetric unit contains one Zn^II cation, two halves of 2,2′‐(diazene‐1,2‐diyl)dibenzoate anions (denoted L²⁻) and half of a 1,2‐bis(pyridin‐4‐yl)ethene ligand (denoted bpe). The three ligands lie across crystallographic inversion centres. Each Zn^II centre is four‐coordinated by three O atoms of bridging carboxylate groups from three L²⁻ ligands and by one N atom from a bpe ligand, forming a tetrahedral coordination geometry. Two Zn^II atoms are bridged by two carboxylate groups of L²⁻ ligands, generating a [Zn₂(CO₂)₂] ring. Each loop serves as a fourfold node, which links its four equivalent nodes via the sharing of four L²⁻ ligands to form a two‐dimensional [Zn₂L₄]_n net. These nets are separated by bpe ligands acting as spacers, producing a three‐dimensional framework with a 4⁶6⁴ topology. Powder X‐ray diffraction and solid‐state photoluminescence were also measured.     

Disentangling steric and electronic factors in monomeric bis(2‐bromo‐4‐chloro‐6‐{[(2‐hydroxyethyl)imino]methyl}phenolato‐κ2N,O)copper(II)

The title compound, [Cu(C₉H₈BrClNO₂)₂], is a square‐planar complex. The potentially tridentate dibasic 2‐bromo‐4‐chloro‐6‐{[(2‐hydroxyethyl)imino]methyl}phenolate ligand coordinates in a trans‐bis fashion to the Cu^II centre via the imine N and phenolate O atoms. The Cu^II atom lies on the centre of inversion of the molecule. The potentially coordinating hydroxyethyl group remains protonated and uncoordinated, taking part in intermolecular hydrogen bonds with vicinal groups, leading to the formation of a two‐dimensional hydrogen‐bond network with sheets parallel to the (10) plane. Substituent effects on the crystal packing and coordination modes of the ligand are discussed.