A Vineyard-type approximation for the distinct term of the dynamic pair correlation function

The distinct term of the van Hove function G(r, t) is approximated by a Vineyard type convolution approximation. The convolution is made with a certain self correlation function G _sd (r, t) generated by dynamics of pairs of particles. This G _sd (r, t) function accounts partly for cross correlation and thus improves the results achievable by the convolution with the pure self term of G(r, t). The results computed by the present method are compared with molecular dynamics data at two liquid-like densities. Good agreement is found for the intermediate range of wave vectors. The approximation is recommended, in particular, for purposes of Fourier transformation.     

Diagrammatic kinetic theory for a lattice model of a liquid. I. Theory

We present a diagrammatic formalism for the time correlation functions of density fluctuations for an excluded volume lattice gas on a simple d-dimensional hypercubic lattice. We consider a multicomponent system in which particles of different species can have different transition rates. Our theoretical approach uses a Hilbert space formalism for the time dependent dynamical variables of a stochastic process that satisfies the detailed balance condition. We construct a Liouville matrix consistent with the dynamics of the model to calculate both the equation of motion for multipoint densities in configuration space and the interactions in the diagrammatic theory. A Boley basis of fluctuation vectors for the Hilbert space is used to develop two formally exact diagrammatic series for the time correlation functions. These theoretical techniques are generalizations of methods previously used for spin systems and atomic liquids, and they are generalizable to more complex lattice models of liquids such as a lattice gas with attractive interactions or polymer models. We use our formalism to construct approximate kinetic theories for the van Hove correlation and self-correlation function. The most simple approximation is the mean field approximation, which is exact for the van Hove correlation function of a one component system but an approximation for the self-correlation function. We use our first diagrammatic series to derive a two site multiple scattering approximation that gives a simple analytic expression for the spatial Fourier transform of the self-correlation function. We employ our second diagrammatic series to derive a simple mode coupling type approximation that provides a system of equations that can be solved for the self-correlation function.     

Exact density functional theory for ideal polymer fluids with nearest neighbor bonding constraints

We present a new density functional theory of ideal polymer fluids, assuming nearest-neighbor bonding constraints. The free energy functional is expressed in terms of end site densities of chain segments and thus has a simpler mathematical structure than previously used expressions using multipoint distributions. This work is based on a formalism proposed by Tripathi and Chapman [Phys. Rev. Lett. 94, 087801 (2005)]. Those authors obtain an approximate free energy functional for ideal polymers in terms of monomer site densities. Calculations on both repulsive and attractive surfaces show that their theory is reasonably accurate in some cases, but does differ significantly from the exact result for longer polymers with attractive surfaces. We suggest that segment end site densities, rather than monomer site densities, are the preferred choice of "site functions" for expressing the free energy functional of polymer fluids. We illustrate the application of our theory to derive an expression for the free energy of an ideal fluid of infinitely long polymers.     

Mechanism for singular behavior in vibrational spectra of topologically disordered systems: short-range attractions

At low-enough fluid densities, we have found some naive singular behavior, like the van Hove singularities in the phonon spectra of lattices, appearing in the instantaneous normal mode spectra of the Lennard-Jones (LJ) 2n-n fluids, which serve as a prototype of topologically disordered systems. The singular behavior cannot be predicted by the mean-field theory, but interpreted by the perturbed binary modes of some special pairs, called the mutual nearest neighbor pairs, at separations corresponding to the extreme binary frequencies, which are solely determined by the attractive part of the LJ 2n-n pair potential. By reducing the range of attraction in the pair potential under the conditions of the same particle diameter and well depth, the tendency for the appearance of the singular behavior shifts to higher fluid densities. From this study, we conclude that pair potential with a short-range attraction can be a mechanism to produce a counterpart of the van Hove singularity in the vibrational spectra of disordered systems without a reference lattice.     

Free energy density functional for adsorption of fluids in nanopores

A classical free energy density functional, which is isomorphic to a usual effective hard sphere model + mean field approximation for tail contribution, is proposed for treatment of real fluids in inhomogeneous states. In the framework of the classical density functional theory (DFT), the present functional is applied to two representative model fluids, namely, a Lennard-Jones fluid and a hard core attractive Yukawa fluid, subject to influence of various external fields. A comprehensive comparison with simulation results and a detailed analysis show that the present functional holds simultaneously all of the desirable properties inherent in an excellent functional, such as high accuracy, computational simplicity, consistency with a hard wall sum rule, nonrecourse to use of adjustable parameter(s) and weighted densities, reproduction of bulk second-order direct correlation function (DCF) in bulk limit, and applicability to subcritical fluid phenomena.     

Phase behavior of ionic fluids in slitlike pores: a density functional approach for the restricted primitive model

We present a density functional theory of nonuniform ionic fluids. This theory is based on the application of the electrostatic contribution to the free energy functional arising from mean spherical approximation for a bulk restricted primitive model and from the energy route bulk equation of state. In order to employ this functional we define a reference fluid and additional averaged densities, according to the approach introduced by Gillespie, Nonner and Eisenberg [J. Phys.: Condens. Matter 14, 12129 (2002)]. In the case of bulk systems the proposed theory reduces to the mean spherical approximation equation of state, arising from the energy route and thus it predicts the first-order phase transition. We use this theory to investigate the effects of confinement on the liquid-vapor equilibria. Two cases are considered, namely an electrolyte confined to the pore with uncharged walls and with charged walls. The dependence of the capillary evaporation diagrams on the pore width and on the electrostatic potential is determined.     

Does confining the hard-sphere fluid between hard walls change its average properties?

We use grand canonical transition-matrix Monte Carlo and discontinuous molecular dynamics simulations to generate precise thermodynamic and kinetic data for the equilibrium hard-sphere fluid confined between smooth hard walls. These simulations show that the pronounced inhomogeneous structuring of the fluid normal to the confining walls, often the primary focus of density functional theory studies, has a negligible effect on many of its average properties over a surprisingly broad range of conditions. We present one consequence of this insensitivity to confinement: a simple analytical equation relating the average density of the confined fluid to that of the bulk fluid with equal activity. Nontrivial implications of confinement for average fluid properties do emerge in this system, but only when the fluid is both (i) dense and (ii) confined to a gap smaller than approximately three particle diameters. For this limited set of conditions, we find that "in-phase" oscillatory deviations in excess entropy and self-diffusivity (relative to the behavior of the bulk fluid at the same average density) occur as a function of gap size. These paired thermodynamic/kinetic deviations from bulk behavior appear to reflect the geometric packing frustration that arises when the confined space cannot naturally accommodate an integer number of particle layers.     

Optimal protocols for minimal work processes in underdamped stochastic thermodynamics

For systems in an externally controllable time-dependent potential, the optimal protocol minimizes the mean work spent in a finite-time transition between two given equilibrium states. For overdamped dynamics which ignores inertia effects, the optimal protocol has been found to involve jumps of the control parameter at the beginning and end of the process. Including the inertia term, we show that this feature not only persists but that even delta-peak-like changes of the control parameter at both boundaries make the process optimal. These results are obtained by analyzing two simple paradigmatic cases: First, a Brownian particle dragged by a harmonic optical trap through a viscous fluid and, second, a Brownian particle subject to an optical trap with time-dependent stiffness. These insights could be used to improve free energy calculations via either thermodynamic integration or "fast growth" methods using Jarzynski's equality.     

A fundamental measure theory for the sticky hard sphere fluid

We construct a density functional theory (DFT) for the sticky hard sphere (SHS) fluid which, like Rosenfeld's fundamental measure theory (FMT) for the hard sphere fluid [Y. Rosenfeld, Phys. Rev. Lett. 63, 980 (1989)], is based on a set of weighted densities and an exact result from scaled particle theory (SPT). It is demonstrated that the excess free energy density of the inhomogeneous SHS fluid Φ(SHS) is uniquely defined when (a) it is solely a function of the weighted densities from Kierlik and Rosinberg's version of FMT [E. Kierlik and M. L. Rosinberg, Phys. Rev. A 42, 3382 (1990)], (b) it satisfies the SPT differential equation, and (c) it yields any given direct correlation function (DCF) from the class of generalized Percus-Yevick closures introduced by Gazzillo and Giacometti [J. Chem. Phys. 120, 4742 (2004)]. The resulting DFT is shown to be in very good agreement with simulation data. In particular, this FMT yields the correct contact value of the density profiles with no adjustable parameters. Rather than requiring higher order DCFs, such as perturbative DFTs, our SHS FMT produces them. Interestingly, although equivalent to Kierlik and Rosinberg's FMT in the case of hard spheres, the set of weighted densities used for Rosenfeld's original FMT is insufficient for constructing a DFT which yields the SHS DCF.     

Optimal pairwise and non-pairwise alchemical pathways for free energy calculations of molecular transformation in solution phase

We estimate the global minimum variance path for computing the free energy insertion into or deletion of small molecules from a dense fluid. We perform this optimization over all pair potentials, irrespective of functional form, using functional optimization with a two-body approximation for the radial distribution function. Surprisingly, the optimal pairwise path obtained via this method is almost identical to the path obtained using a optimized generalized "soft core" potential reported by Pham and Shirts [J. Chem. Phys. 135, 034114 (2011)]. We also derive the lowest variance non-pairwise potential path for molecular insertion or deletion and compare its efficiency to the pairwise path. Under certain conditions, non-pairwise pathways can reduce the total variance by up to 60% compared to optimal pairwise pathways. However, optimal non-pairwise pathways do not appear generally feasible for practical free energy calculations because an accurate estimate of the free energy, the parameter that is itself is desired, is required for constructing this non-pairwise path. Additionally, simulations at most intermediate states of these non-pairwise paths have significantly longer correlation times, often exceeding standard simulation lengths for solvation of bulky molecules. The findings suggest that the previously obtained soft core pathway is the lowest variance pathway for molecular insertion or deletion in practice. The findings also demonstrate the utility of functional optimization for determining the efficiency of thermodynamic processes performed with molecular simulation.     

Transport properties of the rough hard sphere fluid

Results are presented of a systematic study of the transport properties of the rough hard sphere fluid. The rough hard sphere fluid is a simple model consisting of spherical particles that exchange linear and angular momenta, and energy upon collision. This allows a study of the sole effect of particle rotation upon fluid properties. Molecular dynamics simulations have been used to conduct extensive benchmark calculations of self-diffusion, shear and bulk viscosity, and thermal conductivity coefficients. As well, the validity of several kinetic theory equations have been examined at various levels of approximation as a function of density and translational-rotational coupling. In particular, expressions from Enskog theory using different numbers of basis sets in the representation of the distribution function were tested. Generally Enskog theory performs well at low density but deviates at larger densities, as expected. The dependence of these expressions upon translational-rotational coupling was also examined. Interestingly, even at low densities, the agreement with simulation results was sometimes not even qualitatively correct. Compared with smooth hard sphere behaviour, the transport coefficients can change significantly due to translational-rotational coupling and this effect becomes stronger the greater the coupling. Overall, the rough hard sphere fluid provides an excellent model for understanding the effects of translational-rotational coupling upon transport coefficients.     

Effect of attractions on the structure of polymer solutions confined between surfaces: a density functional approach

A density functional theory is presented to study the effect of attractions on the structure of polymer solutions confined between surfaces. The polymer molecules have been modeled as a pearl necklace of freely jointed hard spheres and the solvent as hard spheres, both having Yukawa-type attractions and the mixture being confined between attractive Yukawa-type surfaces. The present theory treats the ideal gas free energy functional exactly and uses weighted density approximation for the hard chain and hard sphere contributions to the excess free energy functional. The attractive interactions are calculated using the direct correlation function obtained from the polymer reference interaction site model theory along with the mean spherical approximation closure. The theoretical predictions on the density profiles of the polymer and the solvent molecules are found to agree quite well with the Monte Carlo simulation results for varying densities, chain lengths, wall separations, and different sets of interaction potentials.     

A generalized gradient approximation for exchange derived from the model potential of van Leeuwen and Baerends

The common way to obtain energies from Kohn-Sham exchange potentials is by using the Levy-Perdew virial relation. For potentials that are not functional derivatives (i.e., nearly all model exchange potentials in existence), this approach leads to energy expressions that lack translational and rotational invariance. We propose a method for constructing potential-based energy functionals that are free from these artifacts. It relies on the same line-integration technique that gives rise to the Levy-Perdew relation, but uses density scaling instead of coordinate scaling. The method is applicable to any exchange or correlation potential that depends on the density explicitly, and correctly recovers the parent energy functional from a functional derivative. To illustrate our approach we develop a properly invariant generalized gradient approximation for exchange starting from the model potential of van Leeuwen and Baerends.     

Free enthalpy landscape of SrO

Trying to predict thermodynamically stable and metastable solid compounds as function of pressure and temperature requires the global exploration of the enthalpy landscapes of chemical systems and the subsequent construction of their free enthalpy landscapes. In this work, we present a general approach to the determination of a free energy landscape. As an example, we construct the free enthalpy landscape of SrO for two different pressures on the empirical potential level and also compute various thermodynamic and elastic properties of SrO in the NaCl-, CsCl-, NiAs-, NbS-, TiP-, beta-BeO, sphalerite-, and wurtzite-structure type on an ab initio level. We employ density functional theory within the hybrid B3LYP approximation. The results show good agreement with experimental and theoretical data.     

Solvent density inhomogeneities and solvation free energies in supercritical diatomic fluids: a density functional approach

Density functional theory is used to explore the solvation properties of a spherical solute immersed in a supercritical diatomic fluid. The solute is modeled as a hard core Yukawa particle surrounded by a diatomic Lennard-Jones fluid represented by two fused tangent spheres using an interaction site approximation. The authors' approach is particularly suitable for thoroughly exploring the effect of different interaction parameters, such as solute-solvent interaction strength and range, solvent-solvent long-range interactions, and particle size, on the local solvent structure and the solvation free energy under supercritical conditions. Their results indicate that the behavior of the local coordination number in homonuclear diatomic fluids follows trends similar to those reported in previous studies for monatomic fluids. The local density augmentation is particularly sensitive to changes in solute size and is affected to a lesser degree by variations in the solute-solvent interaction strength and range. The associated solvation free energies exhibit a nonmonotonous behavior as a function of density for systems with weak solute-solvent interactions. The authors' results suggest that solute-solvent interaction anisotropies have a major influence on the nature and extent of local solvent density inhomogeneities and on the value of the solvation free energies in supercritical solutions of heteronuclear molecules.     

Slow dynamics of the high density Gaussian core model

We numerically study crystal nucleation and glassy slow dynamics of the one-component Gaussian core model (GCM) at high densities. The nucleation rate at a fixed supercooling is found to decrease as the density increases. At very high densities, the nucleation is not observed at all in the time window accessed by long molecular dynamics (MD) simulation. Concomitantly, the system exhibits typical slow dynamics of the supercooled fluids near the glass transition point. We compare the simulation results of the supercooled GCM with the predictions of mode-coupling theory (MCT) and find that the agreement between them is better than any other model glassformers studied numerically in the past. Furthermore, we find that a violation of the Stokes-Einstein relation is weaker and the non-Gaussian parameter is smaller than canonical glassformers. Analysis of the probability distribution of the particle displacement clearly reveals that the hopping effect is strongly suppressed in the high density GCM. We conclude from these observations that the GCM is more amenable to the mean-field picture of the glass transition than other models. This is attributed to the long-ranged nature of the interaction potential of the GCM in the high density regime. Finally, the intermediate scattering function at small wavevectors is found to decay much faster than its self part, indicating that dynamics of the large-scale density fluctuations decouples with the shorter-ranged caging motion.     

Chemical potential perturbation: a method to predict chemical potentials in periodic molecular simulations

A new method, called chemical potential perturbation (CPP), has been developed to predict the chemical potential as a function of density in periodic molecular simulations. The CPP method applies a spatially varying external force field to the simulation, causing the density to depend upon position in the simulation cell. Following equilibration the homogeneous (uniform or bulk) chemical potential as a function of density can be determined relative to some reference state after correcting for the effects of the inhomogeneity of the system. We compare three different methods of approximating this correction. The first method uses the van der Waals density gradient theory to approximate the inhomogeneous Helmholtz free energy density. The second method uses the local pressure tensor to approximate the homogeneous pressure. The third method uses the Triezenberg-Zwanzig definition of surface tension to approximate the inhomogeneous free energy density. If desired, the homogeneous pressure and Helmholtz free energy can also be predicted by the new method, as well as binodal and spinodal densities of a two-phase fluid region. The CPP method is tested using a Lennard-Jones (LJ) fluid at vapor, liquid, two-phase, and supercritical conditions. Satisfactory agreement is found between the CPP method and an LJ equation of state. The efficiency of the CPP method is compared to that for Widom's method under the tested conditions. In particular, the new method works well for dense fluids where Widom's method starts to fail.     

A validity test of the WCA perturbation theory for two-dimensional Lennard-Jones fluids

The potential energy and pressure are obtained from molecular dynamics simulations of two-dimensional Lennard-Jones fluids over a wide range of densities and temperatures, thus testing the validity of first-order (high temperature approximation) and second-order Weeks-Chandler-Andersen theory. The pressure results, which are very important for a subsequent analysis of adsorption theories, are very much affected by that approximation, especially at low densities and, surprisingly, at very high densities. For the potential energy the effect is smaller, and the approximation gives good results at intermediate and high densities even at low temperatures. The conclusion is that the second-order term of the Weeks-Chandler-Andersen theory is needed for theoretical calculations of the pressure, except at very high temperatures and intermediate densities. Nevertheless, the first-order term gives good results for the potential energy except at low densities. All these findings are necessary for a complete analysis of the validity of the Weeks-Chandler-Andersen theory and its consequences in the study of the adsorption of rare gases onto flat surfaces.     

Generalized van der Waals Theory of Interfaces in Simple Fluid Mixtures

An efficient implementation of the generalized van der Waals theory of fluids is presented for the calculation of surface tension in simple fluid mixtures. While detailed correlation analysis is avoided the dominant binding energy contribution and the negative contribution due to the nonlocal entropy are accounted for in the free energy density functional by simple physical approximations of the type originally introduced by van der Waals. Efficient computation is achieved by the use of a single-parameter optimization of a tanh-shaped profile representing the total density as well as the composition variation across the interface. This simple profile nevertheless incorporates the expected adsorption to the interface of the volatile component. Application is made to argon/krypton mixtures represented by Lennard-Jones potentials and Lorentz-Berthelot combining rules. Surface tension predictions compare well with both experimental observations and computer simulation results which also indicated close agreement in particle density profiles, especially if the Berthelot rule is amended with a binary interaction parameter slightly (3%) less than unity. Copyright 2001 Academic Press.