Mass spectrometry of aryl substituted di- and trisiloxanes

The mass spectra of arylpentamethyldisiloxanes, sym-diaryltetramethyldisiloxanes and 1,5-diaryl-1,1,3,3,5,5-hexamethyltrisiloxanes were examined. Isotopic labeling and peak matching were used to substantiate the proposed fragmentation mechanisms. Siliconium ions dominate the spectra. Loss of neutral fragments from the [M-15]⁺ ions is important. Phenylpentamethyldisiloxane, sym-tetramethyldiphenyldisiloxane and 1,1,3,3,5,5-hexamethyl-1,5-diphenyltrisiloxane are representative examples of the three classes of compounds discussed. The [M-15]⁺ ion of phenylpentamethyldisiloxane loses methane, dimethylsilanone [(CH₃)₂Si?O] and phenylmethylsilanone [PhCH₃Si?O] to yield daughter siliconium ions. The [M-15]⁺ ion of sym-tetramethyldiphenyldisiloxane loses benzene, methane, dimethylsilanone and phenylmethylsilanone to yield daughter siliconium ions. The [M-15]⁺ ion of 1,1,3,3,5,5-hexamethyl-1,5-diphenyltrisiloxane loses benzene, tetramethylcyclodisiloxane and phenyltrimethylcyclodisiloxane to yield daughter siliconium ions. Finally, doubly charged ions are important in the mass spectra of the three series of aryl substituted di- and trisiloxanes discussed.     

Characterization of synthetic N-acetylcysteine conjugates by positive- and negative-ion 252Cf plasma desorption mass spectrometry

N-Acetylcysteine and nine N-acetylcysteine conjugates of synthetic origin were characterized by positive- and negative-ion plasma desorption mass Spectrometry. For sample preparation the electrospray technique and the nitrocellulose spin deposition technique were applied. The fragmentation of these compounds, which are best seen as S-substituted desaminoglycylcysteine dipeptides, shows a similar behaviour to that of linear peptides. In the positive-ion mass spectra intense protonated molecular ion peaks are observed. In addition, several sequence-specific fragment ions (A⁺, B⁺, [Y + 2H]⁺, Z⁺), immonium ions (I⁺) and a diagnostic fragment ion for mercap-turic acids (R_M⁺) are detected. The negative-ion mass spectra exhibit deprotonated molecular ions and in contrast only one fragment ion corresponding to side-chain specific cleavage ([R_XS]^?) representing the xenobiotic moiety. In the case of a low alkali metal concentration on the target, cluster molecular ions of the [nM + H]⁺ or [nM - H]^? ion type (n = 1-3) are observed. The analysis of an equimolar mixture of eight N-acetylcysteine conjugates shows different quasi-molecular ion yields for the positive- and negative-ion spectra.     

Mass spectral behavior of n-alkynes

The 70 e V-electron impact mass spectra of the C₇–C₁₀ n-alkynes have been determined as well as the metastable ion spectra of the molecular ions and the [CS₂]⁺ and [N₂O]⁺ charge exchange mass spectra of the C₇-C₉ n-alkynes. The metastable ion mass spectra provide only a limited opportunity to distinguish between isomers; however, the 70-eV EI mass spectra of isomeric compounds permit a ready distinction between isomers. The [CS₂]⁺ charge exchange mass spectra of isomeric compounds also show substantial differences. The [N₂O]⁺ charge exchange mass spectra do not show the enhancement of β-fission fragments observed in field ionization experiments, despite representing ions of similar internal energy, and it is concluded that field dissociation is responsible for the β-fission fragments in the field ionization experiments.     

GC-MS of amino acids as their trimethylsilyl/t-butyldimethylsilyl Derivatives: In model solutions III

Summary Fragmentation patterns of the essential amino acids (AAs) as their silyl derivatives have been obtained with the aid of ion trap detection (ITD). Three derivatizing reagents, hexamethyldisilazane+trifluoroacetic acid (HMDS+TFAA),bis-(trimethylsilyl)trifluoroacetamide (BSTFA) andN-methyl-N-(t-butyldimethylsilyl)trifluoroacetamide (MTBSTFA) were used. Simple and multiple derivatives obtained with each reagent have been investigated, with regard to their sensitivity and selectivity. Our study performed in the concentration range of 5-2000 ng amino acids has shown that, contrary to literature data, thirteen of the twenty-two AAs investigated including the TBDMS derivatives give rise to more than one peak when eluted. As a result of ion/molecule interaction the very informative ions of high masses, ([M]⁺, [M+TMS/(TBDMS)]⁺, [M+1]⁺) are formed with considerable intensities. The fragments [M-CH₃]⁺, [M-C₄H₉]⁺, [M-(CH₃)₂Si]⁺, [M-TMS/(TBDMS)COO]⁺, [M-TBDMSOH]⁺, [M-TBDMSO]⁺, [M-TBDMSNH]⁺ and numerous others could be utilized for identification purposes. Presented at Balaton Symposium on High Performance Separation Methods, Siófok, Hungary, September 1–3, 1999     

Positive electron impact and chemical ionization mass spectra of some nitramine nitrates

The positive electron impact (EI) and isobutane chemical ionization (CI) mass spectra of six nitramine nitrates were studied with the aid of some accurate mass measurements. In the EI spectra, β fission relative to both the nitramine and nitrate ester is important. In the CI spectra a major ion occurs at [MH – 45]⁺ and was found to be mainly due to [M + 2H ? NO₂]⁺. All of the compounds except N-(2 hydroxyethyl)-N-(2′,4′,6′-trinitrophenyl)nitramine nitrate gave an [MH]⁺ ion. The [MH – 45]⁺ ion in the isobutane CI mass spectra of tetryl is also due to [M + 2H ? NO₂]⁺.     

Mass spectrometric behaviour of 1-imino-substituted pyrazolo[1,2-a]-[1,2,4]triazoles under electron and chemical ionization

The spectra of five pharmacologically interesting substituted pyrazolo[1,2-a][1,2,4]triazole hydroiodides were measured under electron and chemical ionization. In the electron ionization spectra, in addition to the intense molecular ion peak of the free base (M⁺*), there was also a relatively intense molecular ion peak of the hydroiodide form, which is unusual since the hydroiodides are rarely so stable. The phenylimino and phenylamino substituents of the triazole ring affected the fragmentation behaviour of the compounds very much. The chemical ionization reagent gases used in this work were methane, isobutane, deuterated ammonia and acetone. In all the cases practically only [M+H]⁺ ions were observed, the only exception being acetone which also gave rise to intense [M+C₂H₃O]⁺ and [M⁺C₃H₇O]⁺ adduct ions. None of the reagent gases used was able to cause any fragmentation.     

Electron impact mass spectra of chlorinated methyl propanoates

The mass spectral fragmentations of all eleven chlorinated methyl propanoates have been studied. Deuterium labelling and metastable ion analysis were used to elucidate the fragmentation mechanism. The molecular ion peaks of all compounds are small, except methyl 3,3-dichloropanoate (38%). In most cases α-cleavage gives the base peak [COOCH₃]⁺, and the loss of a chlorine atom from the molecular ion is characteristic of the 3-chloro, 3,3-dichloro and 3,3,3-trichloro compounds. Metastable ions showed the losses of small neutral molecules such as CH₃OH, CH₂CO, CO₂ and CO from the [M? Cl]⁺ ion. α-Cleavage and the loss of Cl^˙ gives an intense [M? COOCH₃? Cl]^+˙ peak, which is the base peak in the spectra of the 2,3-dichloro and 2,3,3-trichloro compounds.     

Mass spectra of new heterocycles: XII. Main fragmentation pathways of the molecular ions of 5-methylsulfanyl-1-vinyl-1H-pyrrol-2-amines under electron impact and chemical ionization

Fragmentation patterns of 5-methylsulfanyl-1-vinyl-1H-pyrrol-2-amines under electron impact (70 eV) and chemical ionization (methane as reactant gas) were studied for the first time. The electron impact mass spectra of all the examined compounds contained a strong peak of molecular ion which decomposed along four pathways. Two pathways involved cleavage of the C-S bonds with elimination of methyl (major) and MeS radicals (minor), and the two others, decomposition of the pyrrole ring. The chemical ionization mass spectra displayed strong molecular, [M + H]⁺, and odd-electron [M + H ? SMe]⁺ ion peaks. N,N-Dimethyl-5-methylsulfanyl-4-phenyl-1-vinyl-1H-pyrrol-2-amine under chemical ionization with methane as reactant gas characteristically decomposed with formation of [M ? C₄H₉N]⁺ as the only fragment ion.     

Ortho effects in organic molecules on electron impact. 14—Concerted and stepwise ejections of SO2 and N2 from N-arylidene 2-nitrobenzenesulphenamides

Unexpected ortho interaction of the nitro group has been noticed during the mass spectral fragmentations of N-arylidene 2-nitrobenzenesulphenamides, where the molecular ions expel SO₂ and N₂ both in concerted and stepwise processes. Loss of a hydrogen or the substituent from this fragment leads to a very abundant ion in all the compounds studied. Based on chemical evidence and linked-scan studies, a 1,2-phenylenetropylium cation structure has been postulated for the [M–SO₂–N₂–H/substituent]⁺ ion.     

Mass spectral fragmentation pattern of 2,2′-bipyridyls. Part XII. 2,2′-Selenodipyridine

The mass spectrum of 2,2′-selenodipyridine obtained by electron impact is reported. The base peak in the spectrum is due to the C₅H₄N⁺ ion formed principally by rupture of the central bonds. The molecular ion gives rise to a peak of 50% of the intensity of the base peak. Other fragmentations include loss of H, Se and CSe from the molecular ion and HCN from the M-1 ion.     

Studies on the Mass Spectra of Monocyclic N‐Aryl‐δ‐Valerolactams

The fragmental behavior of some monocyclic N‐aryl‐δ‐valerolactams in EI‐MS was studied. Their molecular ion peak, together with some characteristic fragments such as [M‐29]⁺, [M‐56]^+?, [M‐69]⁺, and [M‐98]⁺, were always found in a series of N‐aryl‐δ‐valerolactams in EI‐MS spectra. Furthermore, the mechanism for the interpretation of each fragment is described.     

The origin of the [M – 1]+ ion in the mass spectra of N,N-dialkylbenzamides. A reinvestigation of the mechanism

A reinvestigation of the mechanism of formation of the [M – 1]⁺ ion in a series of N,N-dialkylbenzamides suggests that previous mechanisms put forward to account for the formation of the [M – 1]⁺ ion are deficient. A new mechanism is proposed which accounts for the data observed previously, as well as our results for a series of N,N-dialkyl-2-chlorobenzamides, 4-substituted N,N-dimethylbenzamides and some related compounds. For the N,N-dialkyl-2-chlorobenzamides, comparison of the abundances of the [M – 1]⁺ ion with the [M – 35]⁺ ion suggests that a concurrent reaction is occurring, besides loss of the ortho aromatic hydrogen atom. A study of substituent effects on the intensity ratio [M – 1]⁺/[M]⁺ shows an upward concave plot of this against σ⁺, suggesting that two competing mechanisms occur for the formation of the [M – 1]⁺ ion.     

Mass spectra of some (Z)-α-Phenyl-β-(2-thienyl)acrylonitriles

The mass spectra of some (Z)α-(4-R′-phenyl)-β-(2-thienyl-5-R)acrylonitriles (R = H, CH₃, Br; R′ = H, CH₃O, CH₃, Cl, NO₂) at 70 eV are reported. Mass spectra exhibit pronounced molecular ions. The compound's where R = H, and CH₃ are characterized by the occurrence of a strong [M - H]⁺ peak. Moreover, in all the compounds a m/z 177 peak occurs. In the compounds where R = H, [M - HS]* and [M - CHS]* ions are present except the nitroderivatives. Where R = CH₃, [M - HS]⁺ ion occurs.     

Characterization of N‐Boc/Fmoc/Z‐N′‐formyl‐gem‐diaminoalkyl derivatives using electrospray ionization multi‐stage mass spectrometry

N‐Boc/Fmoc/Z‐N′‐formyl‐gem‐diaminoalkyl derivatives, intermediates particularly useful in the synthesis of partially modified retro‐inverso peptides, have been characterized by both positive and negative ion electrospray ionization (ESI) ion‐trap multi‐stage mass spectrometry (MSⁿ). The MS² collision induced dissociation (CID) spectra of the sodium adduct of the formamides derived from the corresponding N‐Fmoc/Z‐amino acids, dipeptide and tripeptide acids show the [M + Na‐NH₂CHO]⁺ ion, arising from the loss of formamide, as the base peak. Differently, the MS² CID spectra of [M + Na]⁺ ion of all the N‐Boc derivatives yield the abundant [M + Na‐C₄H₈]⁺ and [M + Na‐Boc + H]⁺ ions because of the loss of isobutylene and CO₂ from the Boc protecting function. Useful information on the type of amino acids and their sequence in the N‐protected dipeptidyl and tripeptidyl‐N′‐formamides is provided by MS² and subsequent MSⁿ experiments on the respective precursor ions. The negative ion ESI mass spectra of these oligomers show, in addition to [M‐H]^?, [M + HCOO]^? and [M + Cl]^? ions, the presence of in‐source CID fragment ions deriving from the involvement of the N‐protecting group. Furthermore, MSⁿ spectra of [M + Cl]^? ion of N‐protected dipeptide and tripeptide derivatives show characteristic fragmentations that are useful for determining the nature of the C‐terminal gem‐diamino residue. The present paper represents an initial attempt to study the ESI‐MS behavior of these important intermediates and lays the groundwork for structural‐based studies on more complex partially modified retro‐inverso peptides. Copyright © 2013 John Wiley & Sons, Ltd.     

Mass Spectral fragmentation patterns of heterocycles. V . Electron impact promoted mass spectral fragmentation of indolo[1,7-ab][1]benzazepine and Some of its Derivatives

The fragmentation patterns of 1,2,6,7-tetrahydroindolo[1,7-ab][l]benzazepin-1-one ( 1 ), 6,7-dihydroindolo-[1,7-ab][l]benzazepine ( 2 ) and indolo[1,7-ab][1]benzazepine ( 3 ) on electron impact have been examined. Loss of carbon monoxide to form the base peak at m/e 207 and loss of CHO radical to give m/e 206 consititute the major fragmentation pathways for 1. The moleclar ions ( M ⁺) are abundant for each of the compounds; observed as the second most intense peak for 1 (85% relative intensity) and the base peaks for 2 and 3 . The spectrum of 2 is characterized by intense M-1 and M-2 ions and by the presence of a M-15 ion (m/e 204) of moderate intensity (11.4%). In all other respects the spectra of 2 and 3 are strikingly similar. The M-15 ion from 2 , assigned the heteroaromatic pyrroloacridinium structure, is also formed in the spectrum of 1. A second heteroaromatic ion at m/e 191, common to the spectra of 1 , 2 and 3 , is believed to have the pyrrolocarbazol-ium structure. Metastable ion transitions and exact mass measurements support most of the proposed fragmentation pathways and structural assignments.     

Mass spectra of some α-substituted phenyl-α,α′-dimethoxyl ketones and their derivatives

The mass spectra of some α-substituted phenyl-α,α′-dimethoxyl ketones (compounds 1) and their 2,4-dinitrophenylhydrazones (compounds 2) and semicarbazones (compounds 3) have been studied. The characteristic fragments at m/z (M ? 73) from compounds 1, m/z (M ? 253) from compounds 2 and m/z (M ? 130) from compounds 3 are abundant and proposed to be [ArCROCH₃]⁺. Fragmentations yielding [M⁺ ? 49] from compounds 2 are abnormal and probably involve the methoxyl and nitro groups. The intense peak at m/z 130 due to [CH₃OCH₂CNNHCONH₂]⁺ from compounds 3 corresponds to α-cleavage of the molecular ion. Some other fragments from these new compounds are interpreted in this paper.     

Chemical ionization desorption mass spectrometry of some quaternary ammonium salts

The ammonia chemical ionization desorption spectra of N,N-dimethyl quaternary ammonium iodides in addition to high protonated molecular ion [M + H]⁺ intensity, show signals for an ion radical composed of N-methyl abstracted salt cation and ammonia [C + NH₃? CH₃]^+˙. These ions corresponding to the cation +2 show increased importance in the chemical ionization mode, using the same reagent gas. The technique of chemical ionization desorption appears suitable for the analysis of salts, and thus for the determination of the molecular weight of both anion and cation.     

Electron ionization-induced loss of a methyl radical from 1-cyclopropyl-4-substituted-1,2,3,6 tetrahydropyridine derivatives

The electron ionization mass spectra of 1-cyclopropyl-4-substituted-1,2,3,6-tetrahydropyridine derivatives are characterized by a base peak corresponding to [M-15]⁺. Evidence is presented to support a fragmentation process involving an initial cyclopropyl ring opening of the parent cyclopropylaminyl radical cation followed by intramolecular transfer of a hydrogen atom from the ring carbon atoms α to nitrogen to the primary carbon-centered radical and finally a fragmentation step proceeding by loss of a methyl radical and formation of a stable N-ethenyldihydropyridinium ion, the [M-15]⁺ fragment.     

Study of the oxidation dynamics of ethyl cysteinate dimer in solution by ultra‐performance liquid chromatography with tandem mass spectrometry

Diaminodithiol (N₂S₂)‐type compounds readily oxidize to produce disulfides. We found that some ligands failed to produce a prospective protonated molecular ion peak but gave a peak of [M–2+H]⁺, whereas others produced both [M+H]⁺ and [M–2+H]⁺ peaks in electrospray ionization mass spectra. In this study, an important N₂S₂ ligand, the ethyl cysteinate dimer (ECD), was investigated with high‐resolution accurate mass measurements and tandem mass spectrometric analysis. The elemental compositions of ECD and its oxidized product were analyzed. The oxidation of ECD was confirmed. An ultra‐performance liquid chromatography/tandem mass spectrometry (UPLC/MS/MS) method in multiple reaction monitoring mode was developed, and ECD and its oxidized product were quantitated in solution. The dynamic oxidation process of ECD in solution was studied in detail. The full time course of the decrease in ECD and the increase in its oxide was observed; the oxidation procedure followed first‐order kinetics, and the half‐life time of ECD was 51 min. Copyright © 2009 John Wiley & Sons, Ltd.     

Amidine mass spectral fragmentation patterns

Electron impact mass spectrometry of a range of amidines (R′NC(R)NHR′) including formamidines, acetamidines, benzamidines and tert-butylamidine, has been undertaken, and comparisons made of the fragmentation pathways followed by the different families of compounds. Fragmentation of all the molecular ions is characterized by skeletal carbon-nitrogen bond cleavage to form [R′NCR]⁺ and [R′NH]⁺ fragments, both of which are observed. For formamidines (R?H), the positive charge remains with the [R′NH]⁺ fragment which leads to the base peak at m/z93 corresponding to [R′NH₂]⁺˙. In contrast, for acetamidines and benzamidines the charge prefers to remain with the [R′NCR]⁺ fragment which gives the base peak for these compounds. The spectra of unsubstituted amidines (HNC(R)NH₂) are characterized by cleavage of the carbon substituent from the NCN skeleton, [CN₂H₃]⁺ (m/z 43) being produced in all cases.