GC-MS in space research: decoding complex isothermal chromatograms recovered from space missions

An analytical procedure is described to study GC-MS isothermal chromatograms simulating those recovered from space missions: in fact GC plays a predominant role in space missions devoted to characterizing the chemical composition of extra-terrestrial atmospheres. SIM (selected ion monitoring) detection was used for monitoring selected chemical classes: a simplified chromatogram can be obtained giving information on the chemical composition of the complex mixture. Since only isothermal GC chromatograms are allowed by flight constraints, a time axis transformation is required to make them homogeneous: i.e., constant retention increments for CH2 additions in terms of a homologous series. The order in the linearized chromatogram can be simply singled out with a chemometric approach based on the study of the Autocovariance Function (ACVF) computed on the digitized chromatogram: the plot of the experimental autocorrelation function (EACF) shows well-shaped peaks if constant interdistances are repeated in different regions of the chromatogram. The method was applied to standard mixtures representative of planetary atmospheres--hydrocarbons, nitriles and oxygenated compounds with between 3 and 12 carbon atoms--analyzed in flight simulating conditions. The coupling of the selectivity of SIM detection with the interpretation power of the EACF procedure proves to be a powerful tool for interpreting data recovered from space missions: the chemical composition of the mixture can be identified by handling the raw SIM chromatograms.     

Decoding of complex isothermal chromatograms recovered from space missions. Identification of molecular structure

A chemometric approach, based on the study of the autocovariance function, is described to study isothermal GC chromatograms of multicomponent mixtures: isothermal GC analysis is the method of choice in space missions since it is, to date, the only method compatible with flight constraints. Isothermal GC chromatograms look inhomogeneous and disordered with peak density decreasing at higher retention times: a time axis transformation is proposed to make retention an homogeneous process so that CH2 addition in terms of an homologous series yields a constant retention increment. The time axis is transformed into a new scale based on the retention times of n-alkanes, as they are the basis of the universal Kovats indices procedure. The order introduced into the chromatogram by retention time linearization can be simply singled out by the experimental autocorrelation function (EACF) plot: if constant inter-distances are repeated in different regions of the chromatogram, well-shaped peaks are evident in the EACF plot. By comparison, with a standard mixture it is possible to identify peaks diagnostic of specific molecular structures: study of the EACF plot provides information on sample chemical composition. The procedure was applied to standard mixtures containing compounds representative of the planetary atmospheres that will be investigated in the near future: in particular, those related to Titan's atmosphere (Cassini-Huygens mission) and cometary's nucleus (Rosetta mission). The employed experimental conditions simulated those applied to GC instruments installed on space probes and landers in space missions. The method was applied to two specific investigations related to space research, i.e., a comparison of retention selectivity of different GC columns and identification of the chemical composition of an unknown mixture.     

Reversal of Enantiomeric Retention Order by Using a Single N-Derivatized Dipeptide as Chiral Mobile Phase Additive and Porous Graphitised Carbon as Stationary Phase

In this work the three dipeptides, Z-l-alanyl-l-glutaric acid (Z-l-ala-l-glu), Z-l-phenylanyl-l-glutaric acid (Z-l-phe-l-glu) and Z-glycyl-l-glutaric acid (Z-gly-l-glu) were tested as chiral counter ions for enantiomeric resolution of amino alcohols. The influence of solute and counter ion structure upon retention and enantioselectivity was evaluated. The chiral counter ions were dissolved in a mixture of polar solvents, i.e., ethyl acetate, methanol and acetonitrile and the achiral solid phase used was porous graphitic carbon, marketed as Hypercarb. The enantioselectivities observed for the tested solutes were highly influenced by the used chiral counter ion structure. For example no enantioselectivity was observed for (R,S)-alprenolol using Z-l-ala-l-glu while a separation factor (α) of 1.59 was obtained using Z-l-phe-l-glu as chiral counter ion. High selectivity factors (α > 2.7) were observed between enantiomers of tertiary amines using Z-l-phe-l-glu as counter ion. Interestingly, the structure of the counter ion, as well as the charge on Z-l-phe-l-glu and the mobile phase solvent composition, influenced the retention order of the enantiomers.     

Enantiomeric separation of α-phenylethylamine and its analogs by mixed chiral and achiral stationary phase

A mixed stationary phase of modified β-cyclodextrin, 2,6-di-O-butyl-3-O-butyryl-β-cyclodextrin (phase A), and SE-54 (phase B) was used for enantiomeric separation of α-phenylethylami-ne, o,m,p-methyl and o,m,p-methoxy-substituted analogs. The composition of mixed phase was selected by comparison of each calculated amin(= (γm,i+1)/(γm,i))> the relative retention values of the most adjacent peaks, and γm,last, the relative retention values of the last eluting peak at each preselected ratio. Values of γm,i,α calculated by derived equations were in good agreement with the experimental results obtained with two specified mixed phases. All solutes investigated were almost baseline separated at a predicted composition of phase A and phase B in a single run within 18 minutes.     

HRGC separation performance evaluation by a simplified fourier analysis approach

A simple procedure is presented for determining separation performance of HRGC analysis of multicomponent mixtures. The procedure is based on the computation of Autocovariance Function (EACVF) from the digitized experimental chromatogram. Graphic inspection of the EACVF plot permits easy computation of the width value of the single component peak, σ; from the EACVF value at t=O the number of component in the mixture, m, can be simply derived. From these two basic quantities all the other chromatographic performance attributes can be calculated. The consistency of the procedure is tested for different chromatograms and compared with the more complex EACVF fitting method. Several features of the multicomponent chromatogram, overloading effects included, are directly detected.     

Gas chromatographic separation of PCB and OCP by photocatalytic degradation

A photocatalytic degradation method was developed for polychlorobiphenyl (PCB) and organochloride pesticide (OCP) discrimination and quantification. A mixture of Aroclor 1260 and p,p′-DDT was irradiated at 254 nm by UV lamp (40 W) in the presence of TiO₂ (30 mg mL⁻¹ non-aqueous solution). Comparison of gas chromatograms showed that p,p′-DDT signals decreased significantly after irradiation, while Aroclor 1260s chromatograms did not show any difference before and after irradiation. Detection limits were 0.30 mg L⁻¹ and 0.15 mg L⁻¹ for p,p′-DDT and Aroclor 1260, respectively. The method was applied to spiked egg samples, the recoveries were found as 72% for DDT and 82.01% for Aroclor 1260.     

Signal processing of GC-MS data of complex environmental samples: characterization of homologous series

Identification and characterization of homologous series by GC-MS analysis provide very relevant information on organic compounds in complex mixtures. A chemometric approach, based on the study of the autocovariance function, EACVF_tot, is described as a suitable tool for extracting molecular-structural information from the GC signal, in particular for identifying the presence of homologous series and quantifying the number of their terms. A data pre-processing procedure is introduced to transform the time axis in order to display a strictly homogenous retention pattern: n-alkanes are used as external standard to stretch or shrink the original chromatogram in order to build up a linear GC retention scale. This addition can be regarded as a further step in the direction of a signal processing procedure for achieving a systematic characterization of complex mixture from experimental chromatograms. The EACVF_tot was computed on the linearized chromatogram: if the sample presents terms of homologous series, the EACVF_tot plot shows well-defined deterministic peaks at repeated constant interdistances. By comparison with standard references, the presence of such peaks is diagnostic for the presence of the ordered series, their position can be related to the chemical structure of the compounds, their height is the basis for estimating the number of terms in the series. The power of the procedure can be magnified by studying SIM chromatograms acquired at specific m/z values characteristic of the compounds of interest: the EACVF_tot on these selective signals makes it possible to confirm the results obtained from an unknown mixture and check their reliability.The procedure was validated on standard mixtures of known composition and applied to an unknown gas oil sample. In particular, the paper focuses on the study of two specific classes of compounds: n-alkanes and oxygen-containing compounds, since their identification provides information useful for characterizing the chemical composition of many samples of different origin. The robustness of the method was tested in experimental chromatograms obtained under unfavorable conditions: chromatograms acquired in non-optimal temperature program conditions and chromatographic data affected by signal noise.     

A versatile electrophoric derivatisation reagent for negative ion chemical ionisation mass spectrometry: <Emphasis Type="Italic">o</Emphasis>-(pentafluorobenzyloxycarbonyl)-2,3,4,5-tetrafluorobenzoyl chloride

The synthesis of a novel electrophoric derivatisation reagent, o-(pentafluorobenzyloxycarbonyl)-2,3,4,5-tetrafluorobenzoyl chloride, is described. The reagent was tested against selected primary and secondary amino compounds, as well as phenolic and aliphatic hydroxyl compounds as analytical targets. The derivatives exhibit excellent mass spectral properties under negative ion chemical ionisation, i.e. reduced fragmentation and thus high ion current for the targeted m/z during analysis. Since the reagent bears a pentafluorobenzyl ester group, resulting negative ion chemical ionisation mass spectra were expectedly dominated by dissociative resonance electron capture typically observed with these compounds, additionally showing neutral loss of carbon dioxide and ammonia (in the case of primary amines). The reagent is suitable for detecting the target compounds with high sensitivity, as exemplified for the analysis of amphetamine and methylphenidate from human plasma where chromatographic background is drastically reduced by a shift in detected m/z and retention time and lower limits of quantification at 7.8 pg/mL (amphetamine) and 4.5 pg/mL (methylphenidate) can be obtained. The choice of two or three target quantification masses allows selective detection and adjustment of lowest background interference. No carryover effect was observed for the derivatives of amphetamine and methylphenidate.     

Quantitative determination of saroglitazar,a predominantly PPAR alpha agonist,in human plasma by a LC–MS/MS method utilizing electrospray ionization in a positive mode

A sensitive LC–MS/MS method was developed and validated for quantitation of saroglitazar using turboion spray interface with positive ion mode. A liquid–liquid extraction, with a mixture of dichloromethane and diethyl ether, was employed for the extraction of saroglitazar and glimepiride (IS) from human plasma. The chromatographic separation was achieved using an ACE‐5, C₁₈ (4.6 × 100 mm) column with a gradient mobile phase comprising acetonitrile and ammonium acetate buffer with trifluoracetic acid in purified water. Both analytes were separated within 10 min with retention times of 4.52 and 2.57 min for saroglitazar and IS, respectively. Saroglitazar quantitation was achieved by the summation of two MRM transition pairs (m/z 440.2 to m/z 366.0 and m/z 440.2 to m/z 183.1), while that of IS was achieved using transition pair m/z 491.3 to m/z 352.0. The calibration standards of saroglitazar showed linearity from 0.2 to 500 ng/mL, with a lower limit of quantitation of 0.2 ng/mL. The biases for inter‐ and intra‐batch assays were ?7.51–1.15% and ?11.21 to ?3.25%, respectively, while the corresponding precisions were 5.04–8.06% and 1.53–7.68%, respectively. The developed method was used to monitor the plasma concentrations of saroglitazar in clinical samples.     

Rm Values, retention times and π values of a series of potentially mutagenic nitroimidazo[2,1-b]thiazoles

The R_m values and retention times of a series of nitroimidazo[2,1-b]thiazoles were obtained by means of thin-layer and high-performance liquid chromatography, respectively. Extrapolated R_m and log k′ values were correlated in a statistically significant way with π values calculated according to the literature.     

Development of a quantification methodology for polychlorinated biphenyls by using Kanechlor products as the secondary reference standard

Kanechlor (KC)-300, 400, 500 and 600, Japanese polychlorinated biphenyl (PCB) products, and their equivalent mixture were analyzed by using a gas chromatograph (GC) equipped with an SE-54 capillary column/electron capture detector (ECD) and a GC/mass spectrometer in the selected ion monitoring mode (MS-SIM). All peaks were assigned to the composing congeners based on the data on peak assignment of Clophen A-30, 40, 50, 60 and Aroclor 1016, 1242, 1254, 1260 [1] and on the relative retention time values of 209 PCB congeners [2]. The weight percentage of the congener(s) which corresponds to each peak in the mass chromatograms was calculated by comparison of its height with that of certified reference standard with the same molecular weight. Each weight percentage of PCB congener(s) corresponding to each ECD peak was obtained by summing up the percent contribution values of the PCB congeners co-eluting. The results showed that it was possible to use KC products and their equivalent mixture as secondary reference standards for congener-specific PCB quantification.     

Determination of the Enthalpies of Vaporization of Cyclic Organic Peroxides by Correlation of Changes in Gas Chromatographic Retention Times

Liquid and solid cyclic peroxides derived from aliphatic ketones are explosive materials so their enthalpies of vaporization and other thermodynamic or condensed-phase properties cannot be measured directly. In this work the enthalpies of vaporization of peroxides at 298.15 K were estimated simply from gas chromatographic retention times measured at different temperatures. The technique correlates changes in the retention times of compounds whose enthalpies of vaporization are known (called the reference series), with those of the compounds of interest. If t _R′ is the adjusted retention time (retention time of each compound minus the retention time of unretained diethyl ether, used as solvent) a plot of ln t _R′ against 1/T for each compound (reference compounds and cyclic peroxides) results in a straight line (r ² > 0.99 for all compounds). The enthalpy of transfer from solution to the vapor state (Δ_sol^g H _m) can be obtained by multiplying the slope by the gas constant (R). A second plot correlates the enthalpies of transfer from solution to the vapor state (Δ_sol^g H _m), as measured by gas–liquid chromatography (GLC), with enthalpies of vaporization of reference materials (Δ_vap H _m at 298.15 K) available in the literature. C₉–C₁₅ fatty acid methyl esters and hydrocarbons were used as reference compounds. The enthalpies of vaporization of the cyclic organic peroxides were calculated from the equation of the line obtained in this second correlation, the slope of which was Δ_vap H _m (at 298.15 K)/Δ^g _sol H _m. The experiments were performed under isothermal conditions with a DB-5 capillary column, flame-ionization detection (FID), and nitrogen as carrier gas. The column temperature was varied over a range of at least 30–70 K between 403 and 473 K, with chromatograms being acquired at 10 K intervals. Enthalpies of vaporization of cyclic organic peroxides are not available in the literature, and the values given in this paper, obtained by gas chromatography, are the first to be reported.     

The mass spectrum of 1-(2-thienyl) hexane-1-13C

The mass spectrum of 1-(2-thienyl) hexane-1-¹³C is reported. The principal fragmentation routes ofthe parent ion are delineated. Beta cleavage of the alkyl chain predominates, and the label retention indicates that the alpha carbon atom remains with the charged ring moiety. A substantial part of the m/e 97 ion undergoes a ring expansion to a six membered ring. A small amount of alpha cleavage of the alkyl chain occurs with the expected loss of the label. Further fragmentation of the ions from initial alpha or beta cleavage produces similar fragment ions. It is noted that many of the neutral particles lost in the formation of the fragment ions are typical of those encountered in the alkylbenzenes or other aromatic ion systems.     

Syntheses,crystal structures,and some spectroscopic properties of zinc(II) complexes with N2O2 ligands derived from m-phenylenediamine and m-aminobenzylamine

The reaction of bis(salicylidene)-m-phenylenediamine with zinc(II) ion affords a 2?:?2 dinuclear zinc(II) complex formulated as [Zn₂(L¹)₂]. A similar 2?:?2 dinuclear zinc(II) complex, [Zn₂(L²)₂], can be obtained by reaction of bis(salicylidene)-m-aminobenzylamine with zinc(II) ion. These two dinuclear complexes slightly differ in their crystal structures, especially coordination environments around the zinc(II) centers, depending on the dissimilar flexibilities of the two ligands. The differences between the two complexes are reflected in their diffuse reflectance and photoluminescence behaviors.     

Approximate formulae for calculation of the integral òT0Tmexp(-E/RT)dT

Summary In this paper two approximate formulae have been developed for calculation of the integral ò^T₀T^mexp(-E/RT)dT by using integration-by-parts approaches. They are in the following forms: I(m,T) = (RT^m+2)/(E+(m+2)RT)exp(-E/RT) I(m,T) = (RT^m+2)/(E+(m+2)(0.00099441E+0.93695599RT)exp(-E/RT) The validity of the two formulae has been confirmed and their accuracies have been tested with data from numerical calculating. In contrast to existing other integral methods, both the present approaches are simply used, accurate, and can be used for arbitrary values of m.     

The ion kinetic energy and mass spectra of isomeric methyl indoles

The mass spectra of the seven isomeric methylindoles were recorded and the [metastable ion]/[daughter ion] ratios for the reactions m/e 130 → m/e 103 and m/e 103 → m/e 77 have been obtained. The ratios indicate that the decomposing [M — 1] ions (m/e 130) from the 4, 5, 6 and 7 isomers are energetically similar as are the [M — 1] ions from the 2 and 3 isomers. The results observed for the m/e → 103 m/e 77 reaction showed that the decomposing m/e 103 ions from the 2, 3, 4, 5, 6 and 7 isomers all have the same energy distribution. N-Methylindole gave ratios which were similar to the 4 to 7 isomers at 70eV but different at 20 eV. The ion kinetic energy (IKE) spectra of all the isomeric methylindoles were also obtained and the results compared with the data obtained from the [metastable ion]/[daughter ion] approach. The results from the IKE spectra indicated that the energy distributions of the [M — 1] and [(M — 1) — HCN] ions from 1-methylindole and the [(M — 1) — HCN] ions from 2-methylindole could readily be distinguished from other isomers whose [metastable ion]/[daughter ion] ratios were similar. Thus by using both techniques certain ambiguities can be resolved.     

Derivation of the Clebsch–Gordan coefficients by means of projection operators

The Clebsch–Gordan coefficients for the coupling of two angular momenta are derived by using the projection operator technique, developed by Löwdin. The derivation is done in two steps; first for the so-called principal case, i.e. k = m, then for the general case with an arbitrary m. Two different derivations are given for the principal case, a direct one and one based on a recursion procedure. The general case is obtained from the principal case with a step-down operator.     

Longest distance shifting: A simple and efficient approach for the alignment of shifted chromatographic peaks

The preprocessing of chromatograms, such as the alignment of retention time shifts, is often a crucial step in the proper data analysis chain. Here, an efficient approach to align shifted chromatographic signals, longest distance shifting, is presented and highlighted. The performance of this novel strategy was demonstrated by using both simulated chromatograms that covered the different kinds of retention time shifts and the real experimental chromatograms of Pudilan Xiaoyan Tablets obtained by high‐performance liquid chromatography with photodiode array detection. The averaged correlation coefficient for experimental chromatograms were in the range of 0.9517–0.9840 and the peak factor was 0.9989. As a comparison, all the chromatograms have also been aligned using correlation optimized warping and Interval Correlation Optimized Shifting algorithms. The obtained results indicate that the longest distance shifting algorithm is simpler, faster and more effective, and will be potentially suitable for the alignment of other types of signals.     

Gel-permeation chromatography. V. A study of “overloading effects”

In the calculation of molecular weight averages from GPC chromatograms and in the correction for zone broadening effects, it is assumed that the retention volumes of the individual species are not affected by the presence of the other components in the sample (linear fractionation process). This assumption was tested by the computer comparisons of the chromatograms of mixtures of narrow molecular weight distribution polystyrene standards and the envelopes of the individual chromatograms of the components of the mixtures. Disagreements between experimental and computer synthesized chromatograms were interpreted as non-linear fractionation effects. The investigation covered a range of molecular weights (1.8 × 10⁶ to 2100), molecular weight distributions (binary and seven component mixtures), and sample loadings (2 to 70 mg). Accurate normalizations of raw GPC chromatograms and calculations of molecular weight averages were made possible through an automated GPC apparatus using a high-speed computer for data acquisition and data reduction. It was found that some nonlinear fractionation effects (large disagreement between chromatograms of the mixture and the computed envelopes of the individual chromatograms of the components of the mixture) became more pronounced as sample loading was increased and as the molecular weight distribution of the sample narrows. The nonlinear effect was also found to be sensitive to the molecular weight of the sample.     

Effects of polystyrene-b-poly(aminomethyl styrene)s as stabilizers on dispersion polymerization of styrene in alcoholic media

The effects of polystyrene-b-poly(aminomethyl styrene) (PS_n-b-PAMS_m) stabilizers on the particle size (D_n) and size distribution (PSD) in dispersion polymerization of styrene were investigated. The block copolymers, PS_n-b-PAMS_m, were prepared as follows: (i) atom transfer radical polymerization (ATRP) of styrene (PS-Br), (ii) ATRP of vinylbenzylphthalimide with the PS-Br (PS-b-PVBP), and (iii) treatment of the PS-b-PVBP with hydrazine. When the dispersion polymerization of styrene proceeded at 60 °C in ethanol with PS₁₉-b-PAMS₁₃₀ stabilizer, spherical polystyrene particles with D_n=0.91 μm (PSD = 1.01) were obtained. The particle size was strongly affected by the copolymer composition. With an increase in PAMS block length from m=54 to 100 in PS₁₇-b-PAMS_m, particle diameter became smaller from 1.55 to 0.91 μm. On the other hand, an increase in the length from m=20 to 82 in PS₃₄-b-PAMS_ms caused an increase in particle size from 0.35 to 0.70 μm. Titration of the particles suggests that 14–81% of stabilizers used in the polymerization system were attached on the polystyrene particle surfaces, depending on the composition of the block copolymers. Thus, for the dispersion polymerization of styrene, PS_n-b-PAMS_m block copolymers have both functions as a stabilizer during polymerization and surface-modification sites of polystyrene particles.