Proton coupled electron transfer and redox-active tyrosine Z in the photosynthetic oxygen-evolving complex

Proton coupled electron transfer (PCET) reactions play an essential role in many enzymatic processes. In PCET, redox-active tyrosines may be involved as intermediates when the oxidized phenolic side chain deprotonates. Photosystem II (PSII) is an excellent framework for studying PCET reactions, because it contains two redox-active tyrosines, YD and YZ, with different roles in catalysis. One of the redox-active tyrosines, YZ, is essential for oxygen evolution and is rapidly reduced by the manganese-catalytic site. In this report, we investigate the mechanism of YZ PCET in oxygen-evolving PSII. To isolate YZ(?) reactions, but retain the manganese-calcium cluster, low temperatures were used to block the oxidation of the metal cluster, high microwave powers were used to saturate the YD(?) EPR signal, and YZ(?) decay kinetics were measured with EPR spectroscopy. Analysis of the pH and solvent isotope dependence was performed. The rate of YZ(?) decay exhibited a significant solvent isotope effect, and the rate of recombination and the solvent isotope effect were pH independent from pH 5.0 to 7.5. These results are consistent with a rate-limiting, coupled proton electron transfer (CPET) reaction and are contrasted to results obtained for YD(?) decay kinetics at low pH. This effect may be mediated by an extensive hydrogen-bond network around YZ. These experiments imply that PCET reactions distinguish the two PSII redox-active tyrosines.     

Proton coupled electron transfer of ubiquinone Q2 incorporated in a self-assembled monolayer

We present a complete study of the reduction of ubiquinone Q(2) (UQ(2)) in simpler aqueous medium, over a pH range of 2.5 to 12.5. The short isoprenic chain ubiquinones (UQ(2)) were incorporated in a self-assembled monolayer. Under these conditions, the global 2e(-) electrochemical reaction can be described on the basis of a nine-member square scheme. The thermodynamic constants of the system were determined. The global 2e(-) process is controlled by the uptake of the second electron. The elementary electrochemical rate constants obtained by fitting of the experimental rate constant were k(s4) = 1.5 s(-1) for QH˙(+)(2)? QH(2), k(s5) = 1.5 s(-1) for QH˙? QH(-) and k(s6) = 1 s(-1) for Q˙(-)? Q(2-). The three electrochemical reactions QH˙(+)(2)? QH(2), QH˙? QH(-) and Q˙(-)? Q(2-) are successively involved when increasing the pH. Protonations can occur or not, before or after the electron uptake and the reaction paths are, from low to high pH: e(-), H(+)e(-), e(-)H(+), H(+)e(-)H(+), H(+)e(-) and e(-)H(+).     

Proton transfer versus redox modulation in thiourea-phenanthrenequinone molecular and polymeric complexes

Phenanthrenequinone undergoes highly efficient proton transfer processes in the presence of a thiourea-functionalised polystyrene copolymer whereas interactions with a similar benzyl-thiourea monomer show strong redox modulation of the quinone without proton transfer.     

Fast second order electron transfer reactions coupled to redox protein electrochemistry: Experiment and digital simulation

Chemical modification of metal surfaces by chemisorption provides a versatile method for the production of electrode interfaces which can be selective for the direct electrochemistry of one redox protein over another. The electrochemistry of a mixture of horse heart cytochrome c and spinach plastocyanin has been investigated at gold surfaces made selective for first one and then the other protein. The resulting cyclic voltammetry is quite unusual, containing pre-shoulders to both reduction current and reoxidation current peaks. The results have been interpreted in terms of fast second order electron transfer reactions taking place between the two proteins in homogeneous solution. This rationalisation has been corroborated by an explicit digital simulation of the proposed reaction scheme, using second order RKI. There are three independently variable parameters to the simulation: forward kinetic parameter, reverse kinetic parameter, and concentration ratio of non-electrode-active species to electrode-active species. The simulation has been used to explore a number of interesting trends in these parameters. Five such sequences of simulated cyclic voltammograms are reported, together with peak current and potential data in most cases. Attention is drawn to the possibility for further interesting experimental mixed redox protein electrochemistry at selective surfaces.     

Water-mediated electron transfer between protein redox centers

Recent experimental and theoretical investigations show that water molecules between or near redox partners can significantly affect their electron-transfer (ET) properties. Here we study the effects of intervening water molecules on the electron self-exchange reaction of azurin (Az), by performing a conformational sampling on the water medium and by using a newly developed ab initio method to calculate transfer integrals between molecular redox sites. We show that the insertion of water molecules at the interface between the copper active sites of Az dimers slightly increases the overall ET rate, while some favorable water conformations can considerably enhance the ET kinetics. These features are traced back to the interplay of two competing factors: the electrostatic interaction between the water and protein subsystems (mainly opposing the ET process for the water arrangements drawn from MD simulations) and the effectiveness of water in mediating ET coupling pathways. Such an interplay provides a physical basis for the found absence of correlation between the electronic couplings derived through ab initio electronic structure calculations and the related quantities obtained through the Empirical Pathways (EP) method. In fact, the latter does not account for electrostatic effects on the transfer integrals. Thus, we conclude that the water-mediated electron tunneling is not controlled by the geometry of a single physical pathway. We discuss the results in terms of the interplay between different ET pathways controlled by the conformational changes of one of the water molecules via its electrostatic influence. Finally, we examine the dynamical effects of the interfacial water and check the validity of the Condon approximation.     

Variations of diffusion coefficients of redox active molecules in room temperature ionic liquids upon electron transfer

In ionic liquids, the diffusion coefficients of a redox couple vary considerably between the neutral and radical ion forms of the molecule. For a reduction, the inequality of the diffusion coefficients is characterized by the ratio gamma = D(red)/D(ox), where D(red) and D(ox) are the diffusion coefficients of the electrogenerated radical anion and of the corresponding neutral molecule, respectively. In this work, measurements of gamma have been performed by scanning electrochemical microscopy (SECM) in transient feedback mode, in three different room temperature ionic liquids (RTILs) sharing the same anion and with a series of nitro-derivative compounds taken as a test family. The smallest gamma ratios were determined in an imidazolium-based RTIL and with the charge of the radical anion localized on the nitro group. Conversely, gamma tends to unity when the radical anion is fully delocalized or when the nitro group is sterically protected by bulky substituents. The gamma ratios, standard potentials of the redox couple measured in RTILs, and those observed in a classical organic solvent were compared for the investigated family of compounds. The stabilization energies approximately follow the gamma ratios in a given RTIL but change considerably between ionic liquids with the nature of the cation.     

Biosensors based on direct electron transfer in redox proteins

In biosensors based on direct electron transfer in redox proteins, efficient electron-transfer pathways between the immobilized redox protein and the electrode surface have to be established so to allow a fast electron transfer and concomitantly avoiding free-diffusing redox species. In this review, prerequisites for the direct electron transfer of redox proteins and immobilization of redox proteins on the electrode surfaces are addressed. Based on the specific nature of different proteins and non-manual immobilization procedures, possible biosensor designs are discussed, namely biosensors based on (1) ferritin; (2) cytochrome c; (3) myoglobin; (4) hemoglobin; (5) horseradish peroxidase; (6) catalase; (7) glucose oxidase; and (8) xanthine oxidase.     

Proton, electron and energy transfer processes in excited phenol-olefin dyads

Dyads containing phenol and olefin subunits are versatile models for the investigation of proton, electron and energy transfer processes. As they are readily accessible, a number of analogues (allylphenols, cinnamylphenols and derivatives) have been prepared with a wide range of photophysical and photochemical properties. By means of appropriate structural modification of a very simple initial structure, it is possible to reproduce, at will, different types of behaviour. In addition to providing valuable fluorescence emission data, these systems are chemically productive, giving rise to irreversible photoreactions that constitute a fingerprint for the mechanism involved. They include photocyclisation to 5- and 6-membered ring cyclic ethers, Z/E isomerisation, di-pi-methane rearrangement, formation of ortho-quinone methides, photohydration and photodehalogenation. This rich photochemistry is highly sensitive to the microenvironment experienced, as indicated by the dramatic modifications observed within cyclodextrin cavities. Intramolecular OH...pi interactions, both in their ground and excited states, play a key role in the interesting properties of 2-allylphenol derivatives. This is supported by experimental data and also by theoretical calculations.     

Mechanistic implications of proton transfer coupled to electron transfer.

The kinetics of electron transfer for the reactions cis-[Ru(IV)(bpy)2(py)(O)]2+ + H+ + [Os(II)(bpy)3]2+ <==> cis-[Ru(III)(bpy)2(py)(OH)]2+ + [Os(III)(bpy)3]3+ and cis-[Ru(III)(bpy)2(py)(OH)]2+ + H+ + [Os(II)(bpy)3]2+ <==> cis-[Ru(II)(bpy)2(py)(H2O)]2+ + [Os(III)(bpy)3]3+ have been studied in both directions by varying the pH from 1 to 8. The kinetics are complex but can be fit to a double "square scheme" involving stepwise electron and proton transfer by including the disproportionation equilibrium, 2cis-[Ru(III)(bpy)2(py)(OH)]2+ <==> (3 x 10(3) M(-1) x s(-1) forward, 2.1 x 10(5) M(-1) x s(-1) reverse) cis-[Ru(IV)(bpy)2(py)(O)]2+ + cis-[Ru(II)(bpy)2(py)(H2O)]2+. Electron transfer is outer-sphere and uncoupled from proton transfer. The kinetic study has revealed (1) pH-dependent reactions where the pH dependence arises from the distribution between acid and base forms and not from variations in the driving force; (2) competing pathways involving initial electron transfer or initial proton transfer whose relative importance depends on pH; (3) a significant inhibition to outer-sphere electron transfer for the Ru(IV)=O2+/Ru(III)-OH2+ couple because of the large difference in pK(a) values between Ru(IV)=OH3+ (pK(a) < 0) and Ru(III)-OH2+ (pK(a) > 14); and (4) regions where proton loss from cis-[Ru(II)(bpy)2(py)(H2O)]2+ or cis-[Ru(III)(bpy)2(py)(OH)]2+ is rate limiting. The difference in pK(a) values favors more complex pathways such as proton-coupled electron transfer.     

Light-driven electron transfer in a modular assembly of a ruthenium(II) polypyridine sensitiser and a manganese(II) terpyridine unit separated by a redox active linkage. DFT analysis

A series of ruthenium polypyridine-based complexes covalently bound to a terpyridine coordinating site for Mn^II ion coordination has been developed. A redox active unit separates the photoactive unit and the manganese complex. Introducing ester groups on the bipyridine skeleton allows modulation of redox properties of the chromophore. Intramolecular electron transfer from the Mn^II to the photogenerated Ru^III was studied by time-resolved transient absorption and EPR. Photophysical studies support the participation of the imidazole unit in the electron transfer process from the Mn(II) complex and Ru(III) in the case of ester containing chromophores. DFT calculations were performed and used to rationalize the photophysical behavior of the complexes, in particular the effect of coordination of the Mn^II ion to the terpyridine cavity as well as the influence of the electron withdrawing groups on the Ru chromophore.     

Proton transfer in nanoconfined polar solvents. II. Adiabatic proton transfer dynamics

The reaction dynamics for a model phenol-amine proton transfer system in a confined methyl chloride solvent have been simulated by mixed quantum-classical molecular dynamics. In this approach, the proton vibration is treated quantum mechanically (and adiabatically), while the rest of the system is described classically. Nonequilibrium trajectories are used to determine the proton transfer reaction rate constant. The reaction complex and methyl chloride solvent are confined in a smooth, hydrophobic spherical cavity, and radii of 10, 12, and 15 A have been considered. The effects of the cavity radius and the heavy atom (hydrogen bond) distance on the reaction dynamics are considered, and the mechanism of the proton transfer is examined in detail by analysis of the trajectories.     

Proton and electron transfer in the excited state quenching of phenosafranine by aliphatic amines

The quenching of the excited singlet and triplet states of phenosafranine by aliphatic amines was investigated in acetonitrile and methanol. The rate constants for the quenching of the excited singlet state depend on the one-electron redox potential of the amine suggesting a charge transfer process. However, for the triplet state, quenching dependence on the redox potential either is opposite to the expectation or there is not dependence at all. Moreover, in MeOH the first-order rate constant for the decay of the triplet state, k(obs) presents a downward curvature as a function of the amine concentration. This behavior was interpreted in terms of the reversible formation of an intermediate excited complex, and from a kinetic analysis the equilibrium constant K(exc) could be extracted. The log K(exc) shows a linear relationship with the pKb of the amine. On the other hand, for the triplet state quenching in acetonitrile k(obs) varies linearly with the amine concentration. Nevertheless, the quenching rate constants correlate satisfactorily with pKb and not with the redox potential. The results were interpreted in terms of a proton transfer quenching, reversible in the case of MeOH and irreversible in MeCN. This was further confirmed by the transient absorption spectra obtained by laser flash photolysis. The transient absorption immediately after the triplet state quenching could be assigned to the unprotonated form of the dye. At later times the spectrum matches the semireduced form of the dye. The overall process corresponds to a one-electron reduction of the dye mediated by the deprotonated triplet state.     

Complex mechanism of the gas phase reaction between formic acid and hydroxyl radical. Proton coupled electron transfer versus radical hydrogen abstraction mechanisms

The gas phase reaction between formic acid and hydroxyl radical has been investigated with high level quantum mechanical calculations using DFT-B3LYP, MP2, CASSCF, QCISD, and CCSD(T) theoretical approaches in connection with the 6-311+G(2df,2p) and aug-cc-pVTZ basis sets. The reaction has a very complex mechanism involving several elementary processes, which begin with the formation of a reactant complex before the hydrogen abstraction by hydroxyl radical. The results obtained in this investigation explain the unexpected experimental fact that hydroxyl radical extracts predominantly the acidic hydrogen of formic acid. This is due to a mechanism involving a proton coupled electron-transfer process. The calculations show also that the abstraction of formyl hydrogen has an increased contribution at higher temperatures, which is due to a conventional hydrogen abstraction radical type mechanism. The overall rate constant computed at 298 K is 6.24 x 10(-13) cm3 molecules(-1) s(-1), and compares quite well with the range from 3.2 +/- 1 to 4.9 +/- 1.2 x 10(-13) cm3 molecules(-1) s(-1), reported experimentally.     

Integrating proton coupled electron transfer (PCET) and excited states

In many of the chemical steps in photosynthesis and artificial photosynthesis, proton coupled electron transfer (PCET) plays an essential role. An important issue is how excited state reactivity can be integrated with PCET to carry out solar fuel reactions such as water splitting into hydrogen and oxygen or water reduction of CO₂ to methanol or hydrocarbons. The principles behind PCET and concerted electron–proton transfer (EPT) pathways are reasonably well understood. In Photosystem II antenna light absorption is followed by sensitization of chlorophyll P₆₈₀ and electron transfer quenching to give P₆₈₀⁺. The oxidized chlorophyll activates the oxygen evolving complex (OEC), a CaMn₄ cluster, through an intervening tyrosine–histidine pair, Y_Z. EPT plays a major role in a series of four activation steps that ultimately result in loss of 4e^?/4H⁺ from the OEC with oxygen evolution. The key elements in photosynthesis and artificial photosynthesis – light absorption, excited state energy and electron transfer, electron transfer activation of multiple-electron, multiple-proton catalysis – can also be assembled in dye sensitized photoelectrochemical synthesis cells (DS-PEC). In this approach, molecular or nanoscale assemblies are incorporated at separate electrodes for coupled, light driven oxidation and reduction. Separate excited state electron transfer followed by proton transfer can be combined in single semi-concerted steps (photo-EPT) by photolysis of organic charge transfer excited states with H-bonded bases or in metal-to-ligand charge transfer (MLCT) excited states in pre-associated assemblies with H-bonded electron transfer donors or acceptors. In these assemblies, photochemically induced electron and proton transfer occur in a single, semi-concerted event to give high-energy, redox active intermediates.     

Cyclic chronocoulemetry: Disproportionation and dimerization reactions coupled to electron transfer

An extension of double-potential-step chronocoulemetry to multiple or cyclic techniques has been developed, and its potential applications in the study of coupled chemical reactions in electrochemistry are discussed. Disproportionation and dimerization mechnisms are considered. Wroking curves have been calculated with the use of the finite difference digital simulation method. It is shown that better resolution for disproportionation and dimerization reactions can be obtained with cyclic chronocoulometry than with double-potential-step chronocoulemetry. The method has been experimentally verified measuring the disproportionation reaction U(V) in 1 mol dm^?3 sodium hydrogen carbonate solutions. A rate coefficient of 15.6 dm³ mol^?1 was calculated for this reaction.     

Modulation of redox potential in electron transfer proteins: effects of complex formation on the active site microenvironment of cytochrome b5

The reduction potential of cytochrome b5 is modulated via the formation of a complex with polylysine at the electrode surface (Rivera et al., Biochemistry, 1998, 37, 1485). This modulation is thought to originate from the neutralization of a solvent exposed heme propionate and from dehydration of the complex interface. Although direct evidence demonstrating that neutralization of the charge on the heme propionate contributes to the modulation of the redox potential of cytochrome b5 has been obtained, evidence demonstrating that water exclusion from the complex interface plays a similar role has not been conclusive. Herein we report the preparation of the V45I/V61I double mutant of rat liver outer mitochondrial membrane (OM) cytochrome b5. This mutant has been engineered with the aim of restricting water accessibility to the exposed heme edge of cytochrome b5. The X-ray crystal structure of the V45I/V61I mutant revealed that the side chain of Ile at positions 45 and 61 restricts water accessibility to the interior of the heme cavity and protects a large section of the heme edge from the aqueous environment. Electrochemical studies performed with the V45I/V61I mutant of cytochrome b5, and with a derivative in which the heme propionates have been converted into the corresponding dimethyl ester groups, clearly demonstrate that dehydration of the heme edge contributes to the modulation of the reduction potential of cytochrome b5. In fact, these studies showed that exclusion of water from the complex interface exerts an effect (approximately 40 mV shift) that is comparable, if not larger, than the one originating from neutralization of the charge on the solvent exposed heme propionate (approximately 30 mV shift).     

Thermodynamic and electro-kinetic analyses of direct electron transfer (DET) and mediator-involved electron transfer (MET) with the help of a redox electron mediator

In this report, we conceptually distinguish direct electron transfer (DET) from mediator-involved (mediated) electron transfer (MET) in a glucose/oxygen-based fuel cell (FC) using an electrode potential/Fermi energy diagram. The anodic and cathodic overvoltages deviating from the equilibrium potential (the Fermi energy of redox electrons) were taken into account for the organic/inorganic redox couple and the mental experiments were performed during the trip of redox electrons through the interface between the anodic/cathodic organic/inorganic active mass and electrodes to propose electron transfer pathway. The proposed schema (inequality (MET) and equality in Fermi energy (DET)) should be experimentally corroborated by measurement of the electromotive force (emf). The MET is of technological significance in the presence of an electron mediator of the redox couple, despite a slightly narrower emf estimated between two electrodes by roughly 1 to 2 mV at most than the DET, in view of the thermodynamic and electro-kinetic viewpoints.

     

Repair of guanyl radicals in plasmid DNA by electron transfer is coupled to proton transfer

By using gamma-irradiation in the presence of thiocyanate ions, we have generated guanyl radicals in plasmid DNA. These can be detected by using an Escherichia coli base excision repair endonuclease to convert their stable end products to strand breaks. The yield of enzyme-sensitive sites is strongly attenuated by the presence of micromolar concentrations of one of a series of singly substituted phenols, and it is possible to derive bimolecular rate constants for the reduction of DNA guanyl radicals by these phenols. More strongly reducing phenols were found to react more rapidly. This electron-transfer reaction also involves a proton transfer. By comparing the expected energetics of the reaction with the observed rate constants, the electron transfer is found to be mechanistically coupled with the proton transfer.     

Control of quinone redox potentials in photosystem II: Electron transfer and photoprotection

In O(2)-evolving complex Photosystem II (PSII), an unimpeded transfer of electrons from the primary quinone (Q(A)) to the secondary quinone (Q(B)) is essential for the efficiency of photosynthesis. Recent PSII crystal structures revealed the protein environment of the Q(A/B) binding sites. We calculated the plastoquinone (Q(A/B)) redox potentials (E(m)) for one-electron reduction with a full account of the PSII protein environment. We found two different H-bond patterns involving Q(A) and D2-Thr217, resulting in an upshift of E(m)(Q(A)) by 100 mV if the H bond between Q(A) and Thr is present. The formation of this H bond to Q(A) may be the origin of a photoprotection mechanism, which is under debate. At the Q(B) side, the formation of a H bond between D2-Ser264 and Q(B) depends on the protonation state of D1-His252. Q(B) adopts the high-potential form if the H bond to Ser is present. Conservation of this residue and H-bond pattern for Q(B) sites among bacterial photosynthetic reaction centers (bRC) and PSII strongly indicates their essential requirement for electron transfer function.     

Homogeneous redox catalysis of multielectron electrochemical reactions: Part II. Competition between homogeneous electron transfer and addition on the catalyst

Homogeneous redox catalytic processes in which catalysis competes with partial destruction of the catalyst are investigated. The kinetics are shown to depend upon three parameters: the excess factor (concentration of substrate over concentration of the catalyst), a dimensionless kinetic parameter representing the rate of the initial homogeneous electron transfer step and a dimensionless parameter representing the competition between the second electron transfer and the addition on the catalyst. Procedures are described that allow the rate constant of the initial electron transfer step and the ratio of the rate constants of the second electron transfer vs. the addition step to be extracted from the experimental data. The reduction of n-butyl chloride and bromide, mediated by aromatic anion radicals, is taken as an example illustrating the application of the proposed procedures to experimental systems.