Characterization of the interaction between a new merocyanine dye and bovine serum albumin

A new merocyanine dye was synthesized, and its acidity constant was determined by spectrophotometric and chemometrics methods. The interactions of the new cyanine dye with bovine serum albumin (BSA) have been studied by fluorescence and UV absorption spectroscopy at pH 7.40. A visual color change from red to blue was observed by addition of BSA to aqueous solution of the dye. The quenching constants and binding parameters (binding constants and number of binding sites) were determined at different temperatures. The calculated thermodynamic parameters confirmed that the binding reaction is mainly entropy-driven, whereas electrostatic interaction plays major role in the reaction. The displacement experiment confirmed binding of the dye to the subdomain IIA (site 1) of albumin. Moreover, synchronous fluorescence spectroscopy studies revealed the dye induces some local conformational change in BSA. The binding distance, r, between donor (serum albumin) and acceptor (dye) was obtained according to Förster’s theory.     

Synthesis and evaluation as a visible‐light polymerization photoinitiator of a new dye‐linked bis(trichloromethyl)‐1,3,5‐triazine

A dye‐linked initiator consisting of a merocyanine dye, which has an absorption maximum at 460 nm, and a substituted bis(trichloromethyl)‐1,3,5‐triazine initiator was prepared in order to achieve an efficient photopolymerization in a visible‐light region. The spectroscopic studies clearly showed that the dye‐linked initiator exhibit a marked increase in the efficiency of fluorescence quenching than a simple mixture of the dye/initiator. These results are reasonably explained in terms of the efficiency of electron transfer between the dye and the initiator. The relative photoinitiating efficiency of dye‐linked initiators in photopolymerization of acrylate monomers was evaluated and the results clearly indicated that the dye‐linked photoinitiator exhibited a marked increase in the photoinitiating efficiency of photopolymerization of acrylates compared to a simple mixture of the dye/initiator in photopolymer coatings particularly at a lower concentration of the initiator. This was explained in terms of the active quenching sphere of the dye/initiator system. Superior photosensitivity in the linked compound at a lower concentration indicates that this would be particularly useful as a visible‐light photoinitiator in holographic‐recording photopolymers. Copyright © 2004 John Wiley & Sons, Ltd.     

Effects of flunitrazepam on the Lalpha-H(II) phase transition of phosphatidylethanolamine using merocyanine 540 as a fluorescent indicator

Previous studies of our group demonstrated that flunitrazepam is a lipophilic drug capable of interacting with membranes through a partition equilibrium phenomenon. Its localization at the phospholipid polar head region could explain the decrease in the size of dipalmitoylphosphatidylcholine (dpPC) vesicles, through a mechanism that involves the increment in the relative volume of this region with a subsequent increase in the vesicle's surface curvature. In the present work, we investigated if flunitrazepam can affect the L(alpha)-H(II) phase transition of phosphatidylethanolamine through a similar mechanism. This study was approached by using merocyanine 540, a dye sensitive to the molecular packing of membrane lipids. A detailed analysis of merocyanine absorption and fluorescence emission and excitation spectra was performed. The results indicated that the fluorescence emitted came mainly from the monomeric form of merocyanine and that it resulted a good indicator of this phase transition, as was previously described. Flunitrazepam did not affect significantly the onset of the phase transition but showed a tendency to diminish the dye fluorescence emission intensity, which could involve a lower partition of merocyanine in the vesicles. Moreover, the results suggest that this drug produced a delay in the completeness of the phase transition and a decrement in the cooperativity of this phenomenon.     

Tunable interchromophore electronic interaction of a merocyanine dye in hydrogen-bonded supramolecular assemblies scaffolded by bismelamine receptors

The absorption and fluorescence properties of a barbiturate-type donor-pi-acceptor (D-pi-A) merocyanine dye are controlled by complexation with dimeric melamine receptors featuring different tether lengths.     

Photoregulated transmembrane charge separation by linked spiropyran-anthraquinone molecules

Amide-linked spiropyran-anthraquinone (SP-AQ) conjugates were shown to mediate ZnTPPS(4-)-photosensitized transmembrane reduction of occluded Co(bpy)3(3+) within unilamellar phosphatidylcholine vesicles by external EDTA. Overall quantum yields for these reactions were dependent upon the isomeric state of the dye; specifically, 30-35% photoconversion of the closed-ring spiropyran (SP) moiety to the open-ring merocyanine (MC) form caused the quantum yield to decrease by 6-fold in the simple conjugate and 3-fold for an analogue containing a lipophilic 4-dodecylphenoxy substituent on the anthraquinone moiety. Transient spectroscopic and fluorescence quenching measurements revealed that two factors contributed to these photoisomerization-induced changes in quantum yields: increased efficiencies of fluorescence quenching of 1ZnTPPS4- by the merocyanine group and lowered transmembrane diffusion rates of the merocyanine-containing redox carriers. Transient spectrophotometry also revealed the sequential formation and decay of two reaction intermediates, identified as 3ZnTPPS4- and a species with the optical properties of a semiquinone radical. Kinetic profiles for Co(bpy)3(3+) reduction under continuous photolysis in the presence and absence of added ionophores indicated that transmembrane redox mediated by SP-AQ was electroneutral, but reaction by the other quinone-containing mediators was electrogenic. The minimal reaction mechanism suggested from the combined studies is oxidative quenching of vesicle-bound 3ZnTPPS4- by the anthraquinone unit, followed by either H+/e- cotransport by transmembrane diffusion of SP-AQH* or, for the other redox mediators, semiquinone anion-quinone electron exchange leading to net transmembrane electron transfer, with subsequent one-electron reduction of the internal Co(bpy)3(3+). Thermal one-electron reduction of Co(bpy)3(3+) by EDTA is energetically unfavorable; the photosensitized reaction therefore occurs with partial conversion of photonic energy to chemical and transmembrane electrochemical potentials.     

Fast and slow processes of thermal deactivation of excited stilbazolium merocyanine dyes

The long living triplet states play important role in sensitizing action in all photochemical reactions. The yield of generation of triplet states of dyes can be evaluated on the basis of measurements of their slow (microsecond) thermal deactivation (TD). All experiments were carried out in the oxygen presence, it means under quenching dye triplets. The pulse dye laser generates in the investigated solution pressure signal. The high of the amplitudes of first maximum of this pressure wave-form signal in the solution of the investigated dye and in the reference sample were measured. Reference sample exhibits only fast processes of TD. The comparison of the first maximum of wave-form photothermal signal of sample and of reference enable to calculate part of energy exchanged into heat in time longer than time resolution of arrangement. The fluorescence yields of investigated dyes were also established. On the basis of such data, using procedure described in literature, the yield of singlet–triplet intersystem crossing (ISC) was evaluated. It was shown that this yield depends on the length of stilbazolium merocyanine chain. The product of triplet state yield and energy was lower for merocyanines with longer chains. At lower temperatures the yield of fluorescence increases and amount of excitation exchanged in short time into heat decreases. The slow TD process increases in low temperature because of the decrease in the quenching of the dyes triplet states by oxygen. The amount of energy exchanged into heat in a time longer than time resolution of apparatus is due predominantly through TD of the dye triplet states.     

Large edge-excitation red shift for a merocyanine dye in poly(vinyl alcohol) polymer matrix

The observed large edge-excitation red shift of the fluorescence of a merocyanine dye in a polyvinyl alcohol polymer matrix is explained in terms of a matrix that is rigid enough at room temperature to prevent complete equilibration between different solvation sites.     

Fluorimetric study of interaction of merbromin with trypsin

Interaction of merbromin with trypsin is of bovine origin has been studied by monitoring the absorption steady-state and time-resolved fluorescence spectral properties of the dye. Studies have been done in media of varying pH at different trypsin concentrations. It has been observed that trypsin brings about a quenching of fluorescence of the dye. The quenching is static in nature and the equilibrium constant of dye-trypsin interaction in the ground-state has been determined from quenching studies. Steady-state anisotropy of the dye increases in presence of trypsin in the medium. Values of micro-viscosity in the vicinity of the fluorophore in media containing trypsin have been determined from measurements of fluorescence anisotropy. Time-resolved fluorescence studies indicate the existence of two decaying states for the dye. The fractional contribution to the time-resolved decay changes with pH. The average lifetime, however, does not depend on the concentration of trypsin.     

Interaction of Polymethine Dyes with Detonation Nanodiamonds

Among cationic, anionic, and merocyanine polymethine dyes, the binding to detonation nanodiamond (DND) colloid particles in hydrosol occurs only for negatively charged dye species. This, in view of the positive ζ-potential of the DND used in this study, suggests the predominance of electrostatic interactions over other intermolecular forces in such systems. Indeed, after decorating the merocyanine and the cationic dye by one and two negatively charged sulfopropyl groups, respectively, so that the net charge of their colored species becomes negative, the compounds also demonstrate affinity to the DND particles. In all cases, the binding of dyes to DND is accompanied by a decrease in fluorescence intensity and a bathochromic shift of their absorption and fluorescence bands. A quantitative study of the dyes adsorption on the DND nanoparticles as performed using the Küster-Freundlich and Langmuir equations reveals some peculiarities of their attaching to the DND aggregates and allows estimating the specific area of the DND particles at a concentration of 0.0212 wt/vol %.     

Fluorescence quenching induced by conformational fluctuations in unsolvated polypeptides

Time-resolved measurements were conducted to relate the fluorescence lifetimes of dye-derivatized polypeptides to local conformational dynamics in trapped, unsolvated peptide ions. This research was performed to better understand the intramolecular interactions leading to the observed increase of fluorescence quenching with temperature and, in particular, how this quenching is related to conformational fluctuations. Dye-derivatized polyproline ions, Dye-[Pro] n -Arg (+)-Trp, are formed by electrospray ionization and trapped in a variable-temperature quadrupole ion trap where they are exposed to a pulsed laser which excites fluorescence. Lifetime data exhibit fluorescence quenching as a result of an interaction between the dye and tryptophan (Trp) side chain. This result is consistent with solution measurements performed for comparison. The lifetime temperature dependence is closely fit over the range 150-463 K by an Arrhenius model of the ensemble averaged quenching rate, k q. Model fits of the measured lifetimes yield a frequency prefactor of approximately 10 (11) s (-1) for k q characteristic of collective motions of the side chains identified in molecular dynamics (MD) simulations. The data fits also yield activation barriers of approximately 0.3 eV, which are comparable to intramolecular electrostatic interactions calculated between the unshielded charge on the Arg residue and the dye. As a result, the quenching rate appears to be determined by the rate of conformational fluctuations and not by the rate of a specific quenching mechanism. The peptide sequence of Dye-Trp-[Pro] n -Arg (+) was also studied and identified a dependence of the quenching rate on the electrostatic field in the vicinity of the dye, Trp pair. Molecular dynamics simulations were performed over the range of experimental measurements to study trajectories relevant to the quenching interaction. The MD simulations indicate that as the temperature is increased, conformational fluctuations in the presence of strong electrostatic fields of the charged Arg (+) residue can result in both (a) an increased number of dye and Trp separations <8 A and (b) increased exothermicity for electron transfer reactions between the dye and Trp. Consequently, the MD simulations are consistent with increased fluorescence quenching with temperature resulting from the occurrence of conformers having specific positions of the dye, Trp, and Arg (+). As a result, the fluorescence lifetime provides a local probe of conformational fluctuations averaged over the ion ensemble.     

Large edge-excitation red-shift of the fluorescence of an ethanol solution of 4-amino-4'-nitrodiphenyl (and). The case of a solute with a dipole moment increase in the excited state

The observed large edge-excitation red-shift of the fluorescence of 4-amino-4'-nitrodiphenyl (AND) in a rigid ethanol medium and the red-shift of the absorption band as the temperature is lowered are explained in terms of a microscopic solvent heterogeneity. The AND results where the dipole moment is increased upon excitation are compared with the merocyanine dye results where the reverse is true.     

The interaction of boronic acid-substituted viologens with pyranine: the effects of quencher charge on fluorescence quenching and glucose response

The fluorescence sensing of several monosaccharides using boronic acid-substituted viologen quenchers in combination with the fluorescent dye pyranine (HPTS) is reported. In this two-component sensing system, fluorescence quenching by the viologen is modulated by monosaccharides to provide a fluorescence signal. A series of viologen quenchers with different charges were prepared and tested for their ability both to quench the fluorescence of HPTS and to sense changes in glucose concentration in aqueous solution at pH 7.4. Both quenching efficiency and sugar sensing were found to be strongly dependent upon viologen charge. The molar ratio between HPTS and each of the viologen quenchers was varied in order to obtain an optimal ratio that provided a fairly linear fluorescence signal across a physiological glucose concentration range. Both the quenching and sugar sensing results are explained by electrostatic interaction between dye and quencher.     

LASER FLASH SPECTROSCOPY OF METHYLENE BLUE WITH NUCLEIC ACIDS

Absorption spectra, fluorescence spectra and quantum yields, triplet state absorption spectra, yields and rates of decay have been obtained for methylene blue (MB+), MB+/CT-DNA complexes and complexes of MB+ with the synthetic polynucleotides poly[d(G-C)] and poly[d(A-T)]. Strong fluorescence quenching is observed in the complexes of the dye with CT-DNA and poly[d(G-C)] concomitant with a decrease in the triplet yield. The fluorescence and triplet yield of MB+ with poly[d(A-T)] are similar to those of the free dye. The triplet decay times are increased in all three polymer/dye complexes and show a decreased sensitivity to oxygen quenching. These results are interpreted in terms of the binding of the dye to these polymers and the implications of polymer binding on the photosensitizing properties of the dye are discussed.     

Syntheses and some spectroscopic properties of polyanions with pendant merocyanine dyes

Polymers tagged with a local pH reporter were synthesized. A methacrylate-type monomer containing a merocyanine dye residue as a reporter dye—1-(2-methacryloyloxyethyl)-4-(2-(4-hydroxyphenyl)-ethenyl)quinolinium bromide—was synthesized. Its homopolymer and copolymers with sodium 2-acrylamido-2-methylpropanesulfonate were prepared by free radical polymerization. These polymers showed a characteristic color change in aqueous solutions from yellow to red with increasing pH from acidic to basic conditions according to the acid-base equilibria of the merocyanine dye residues. Since the electrostatic potential and polarity of media have a strong effect on the acid–base equilibria, the pendant merocyanine residues are expected to serve as a reporter to provide information on the local environments around the polymer chain at which the dye molecules are incorporated.     

A Dual Colorimetric/Fluorescence System for Determining pH Based on the Nucleophilic Addition Reaction of an o‐Hydroxymerocyanine Dye

Owing to their ability to monitor pH in a precise and rapid manner, optical probes have widely been developed for biological and nonbiological applications. The strategies thus far employed to determine pH rely on two types of processes including reversible protonation of amine nitrogen atoms and deprotonation of phenols. We have developed a novel dual, colorimetric/fluorescence system for determining the pH of a solution. This system utilizes an o‐hydroxymerocyanine dye that undergoes a nucleophilic addition reaction that subsequently causes reversible structural changes interconverting a merocyanine to a spirocyanine and a spirocyanine to a spiropyran. It was demonstrated that the dye can be employed to measure the pH of solutions in the 2.5–5.75 and 9.6–11.8 ranges with color changes from yellow to dark blue and then to lavender. Moreover, the fluorescence response associated with the spirocyanine–spiropyran transformation of the dye occurring in alkaline solutions provides a precise method.     

Fluorescence-quenching phenomenon by photoinduced electron transfer between a fluorescent dye and a nucleotide base.

Fluorescently labeled oligonucleotide probes have been widely used in biotechnology, and fluorescence quenching by the interaction between the dyes and a nucleobase has been pointed out. This quenching causes big problem in analytical methods, but is useful in some other cases. Therefore, it is necessary to estimate the fluorescence quenching intensity under various conditions. We focused on the redox properties of some commercially available fluorescent dyes, and investigated dye-nucleotide interactions between a free dye and a nucleotide in aqueous solution by electrochemical and spectroscopic techniques. Our results suggested that the quenching was accompanied by photoinduced electron transfer between a thermodynamically quenchable excited dye and a specific base. Several kinds of fluorescent dyes labeled to the 5'-end of oligonucleotide C10T6 were prepared, and their quenching ratios compared upon hybridization with the complementary oligonucleotide A6G10. The quenching was completely reversible and their efficiencies depended on the attached fluorophore types. The fluorescence of 5-FAM, BODIPY FL or TAMRA-modified probe was strongly quenched by hybridization.     

Photopolymerization reactions initiated by a visible light photoinitiating system: Cyanine dye/borate salt/1,3,5‐triazine

New three‐component photoinitiating systems consisting of a cyanine dye, borate salt, and a 1,3,5‐triazine derivative were investigated by measuring their photoinitiation activities and through fluorescence quenching experiments. Polymerization kinetic studies based on the microcalorimetric method revealed a significant increase in polymerization rate when the concentration of n‐butyltriphenylborate salt or the 1,3,5‐triazine derivative were increased. The photo‐induced electron transfer process between electron donor and electron acceptor was studied by means of fluorescence quenching and SrEt change of the fluorescence intensity. The experiments performed documented that an increase of the n‐butyltriphenylborate salt concentration dramatically increases the rate of dye fluorescence quenching, whereas the increasing of the 1,3,5‐triazine derivative concentration slows down the consumption of the dye. We conclude that the primary photochemical reaction involves an electron transfer from the n‐butyltriphenylborate anion to the excited singlet state of the dye, followed by the reaction of the 1,3,5‐triazine derivative with the resulting dye radical to regenerate the original dye. This reaction simultaneously produces a triazinyl radical anion derived from the 1,3,5‐triazine, which undergoes the carbon‐halogen bond cleavage yielding radicals active in initiation of a free radical polymerization chain. © 2007 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 45: 3626–3636, 2007     

Role of triplet states of polymethine dyes in photogeneration of electron-hole pairs in poly(N-epoxypropylcarbazole) films

The external magnetic field effects on the spectral and luminescent properties of film composites based on photoconductive poly(N-epoxypropylcarbazole) doped with cationic polymethine and merocyanine dyes have been studied. The magnetic field effects on the intensity and kinetics of delayed fluorescence and recombination luminescence have been revealed. These effects are explained by participation in the photogeneration of charged pairs of singlet-triplet intersystem crossing in excited dye molecules.     

Interaction of zinc tetrasulfonated phthalocyanine with cytochrome C in water and Triton-X 100 micelles

The interaction of a zinc tetrasulfonated phthalocyanine with cytochrome c was studied using steady-state spectroscopic techniques and time-correlated single photon counting in water and Triton-X 100 micelles. The dye forms dimers in water with a high equilibrium constant (70 x 10(6) M(-1)). Because of a specific electrostatic interaction, the presence of cytochrome c does not lead to a dissociation of this dimer, but increases its formation, with an equilibrium constant of about 7.9 x 10(9) M(-1). Triton-X 100 micelles dissociate the dimer, creating two populations of dye molecules: one in a hydrophilic media, probably on the surface of the micelles, another on a hydrophobic environment, probably inside the micelles. However, when cytochrome c is added the dye aggregation is again induced leading to a strong fluorescence quenching. This fluorescence quenching may also be caused by a photoinduced electron-transfer due to the formation of a 1:1 complex between the dye and the protein, but the present work does not give direct evidence of such an effect because the fluorescence decays did not show the presence of an extra component. The results presented here are quite different from those reported for aluminum sulfonated phthalocyanines, where aggregation does not occur and the fluorescence quenching is solely due to photoinduced electron-transfer reactions.     

冠醚部花青的合成及其光电化学性能

部花青类化合物是一种光敏材料,由于它的结构比较稳定,吸收光谱范围可以调节以及容易做成薄膜电极等优点,用部花青染料做光伏器件的研究引起了人们的注视.Ghosh报道了用青类化合物做成高效率Schottky太阳能电池,光电转换效率达到1%.