Synthesis and crystal structure of complex [Mn(Imdc)<Subscript>2</Subscript>(H<Subscript>2</Subscript>O)<Subscript>2</Subscript>] · 2H<Subscript>2</Subscript>O and its interaction with DNA

Under hydrothermal conditions, the complex [Mn(lmdc)₂(H₂O)₂] · 2H₂O (I) was synthesized and characterized by elemental analysis and IR spectrum (HImdc = 4,5-imidazofedicarboxylic acid). The crystal structure of I was determined by single-crystal X-ray diffraction (crystallizing in the monoclinic crystal system, P ₂/c space group, a = 11.000(2), b = 7.1281(14), c = 12.696(3) Å, β = 122.45(3), Z = 2. In I, the Mn²⁺ ion was chelated by two Imdc with one of their nitrogen atoms and a carboxylic oxygen atom, while two water molecules occupy the axial position of the Mn atom forming a distorted octahedral geometry. Three-dimensional structure of I was formed by intermolecular hydrogen bonds. UV-Vis and fluorescence spectra of I interacting with DNA show that insertion is the main binding mode between I and fish sperm DNA. Gel electrophoresis shows that I cleaves both supercoiled and circular pBR322 DNA to form a small molecular fragment.     

Crystal structure and quantum chemical investigation of [Cd(NTO)<Subscript>4</Subscript>Cd(H<Subscript>2</Subscript>O)<Subscript>6</Subscript>] · 4H<Subscript>2</Subscript>O

[Cd(NTO)₄Cd(H₂O)₆] •4H₂O was synthesized by mixing the aqueous solution of 3-nitro-1, 2,4-triazol-5-one (NTO) and cadmium carbonate. The single crystal structure was determined by a four-circle X-ray diffractometer. The crystal is monoclinic, space group C2/c with crystal parameters of a = 2.1229(3) nm, b = 0.6261(8) nm, = 2.1165(3) nm, β= 90.602 (3)°, V= 2.977(6) nm₃, Z = 4, D_c = 2.055 g • cm_-3, μ = 15.45 cm_-1 and F(000) = 1824. 2523 observable independent reflections with F₀4σ(F₀) were used for the determination and refinement of the crystal structure. Lorentz-polarization and absorption correction were applied. The final R is 0.0282 and wR = 0.0792. The analytical results show that the Cd⁺² has two kinds of coordinate bonds in one crystal. One Cd⁺² coordinates with 4 NTO anions and another coordinates with 6 water molecules to form a binucleate complex with a structure of tetrahedron and tetragonal bipyramid, respectively. By using SCF-PM3-MO method, the electron structure of cadmium complex of NTO has been calculated. The analysis of the calculated results shows that when [Cd(NTO)₄Cd(H₂O)₆] • 4H₂O is heated, the crystallization waters will be dissociated first and the ligand waters second and NO₂ group has priority of leaving when NTO⁻ is decomposed. Analysis of the energy level and composition of localized molecular orbitals indicates that both the two Cd²⁺ bond to the coordinating atom with 5s     

Thermal stability of stercorite H(NH<Subscript>4</Subscript>)Na(PO<Subscript>4</Subscript>)·4H<Subscript>2</Subscript>O

Thermogravimetric analysis has been used to determine the thermal stability of the mineral stercorite H(NH₄)Na(PO₄)·4H₂O. The mineral stercorite originated from the Petrogale Cave, Madura, Eucla, Western Australia. This cave is one of many caves in the Nullarbor Plain in the South of Western Australia. The mineral is formed by the reaction of bat guano chemicals on calcite substrates. Upon thermal treatment the mineral shows a strong decomposition at 191 °C with loss of water and ammonia. Other mass loss steps are observed at 158, 317 and 477 °C. Ion current curves indicate a gain of CO₂ at higher temperature and are attributed to the thermal decomposition of calcite impurity.     

Synthesis,thermal investigations and kinetic data of Zn(BF<Subscript>4</Subscript>)<Subscript>2</Subscript>·6H<Subscript>2</Subscript>O

The thermal dehydration and decomposition of Zn(BF₄)₂·6H₂O have been studied by TG, DTA and DSC analyses. It is found that the dehydration occurs in two steps. Following the experimental results a thermal decomposition scheme of the compound under investigation is proposed. The enthalpies of dehydration have been determined as well as the formal kinetic parameters are presented.     

Non-isothermal kinetics of thermal decomposition of NH<Subscript>4</Subscript>ZrH(PO<Subscript>4</Subscript>)<Subscript>2</Subscript>·H<Subscript>2</Subscript>O

Nanocrystalline NH₄ZrH(PO₄)₂·H₂O was synthesized by solid-state reaction at low heat using ZrOCl₂·8H₂O and (NH₄)₂HPO₄ as raw materials. X-ray powder diffraction analysis showed that NH₄ZrH(PO₄)₂·H₂O was a layered compound with an interlayer distance of 1.148 nm. The thermal decomposition of NH₄ZrH(PO₄)₂·H₂O experienced four steps, which involves the dehydration of the crystal water molecule, deamination, intramolecular dehydration of the protonated phosphate groups, and the formation of orthorhombic ZrP₂O₇. In the DTA curve, the three endothermic peaks and an exothermic peak, respectively, corresponding to the first three steps' mass losses of NH₄ZrH(PO₄)₂·H₂O and crystallization of ZrP₂O₇ were observed. Based on Flynn–Wall–Ozawa equation and Kissinger equation, the average values of the activation energies associated with the NH₄ZrH(PO₄)₂·H₂O thermal decomposition and crystallization of ZrP₂O₇ were determined to be 56.720 ± 13.1, 106.55 ± 6.28, 129.25 ± 4.32, and 521.90 kJ mol⁻¹, respectively. Dehydration of the crystal water of NH₄ZrH(PO₄)₂·H₂O could be due to multi-step reaction mechanisms: deamination of NH₄ZrH(PO₄)₂ and intramolecular dehydration of the protonated phosphate groups from Zr(HPO₄)₂ are simple reaction mechanisms.     

Synthesis of [MnCl<Subscript>3</Subscript>(H<Subscript>2</Subscript>O)<Subscript>2</Subscript>(Hatz)]·H<Subscript>2</Subscript>O and investigation of its structure via X-ray diffraction,spectroscopic measurements and DFT calculations

The 3-amino-1,2,4-triazole (atz)-based manganese complex was prepared and characterized through single-crystal X-ray diffraction, IR, EPR, and UV–visible spectroscopy. In the crystal structure, individual complex are interconnected through N(O)–H…Cl hydrogen bonds into 1D undulating chains running parallel to the [110] direction of the unit cell. Chains further grow into 2D supramolecular layers by way of the lattice water molecules of coordination and the chloride anions (O–H…Cl). Layers pack along the b-axis of the unit cell mediated by O–H…Cl(N) and N–H…O(Cl) hydrogen bonds forming a 3D supramolecular architecture. The theoretical calculations were also performed to optimize the structure of the complexes in the gas phase to confirm the structures proposed by X-ray crystallography. In addition, IR and UV–visible spectra of complex were calculated and compared with the corresponding experimental spectra to complete the experimental structural identification. The three-dimensional Hirshfeld surface (3D-HS) and their relative two-dimensional fingerprint plots (2D-FP) reveal that the structure is dominated by H…Cl/Cl…H (50.5%), H…O/O…H (11.3%) and N…O/O…N (10.2%) contacts.     

Erbium(III) and lutecium(III) complexes [Ln(H<Subscript>2</Subscript>O)<Subscript>8</Subscript>][Cr(NCS)<Subscript>6</Subscript>] · 5H<Subscript>2</Subscript>O: Synthesis and crystal structure

[Ln(H₂O)₈][Cr(NCS)₆] · 5H₂O aqua complexes, where Ln = Er (1), Lu (2), have been found in an aqueous solution instead of binary complex salts with an organic ligand in their cation, when crystal products of the reaction between Ln(NO₃)₃ · 6H₂O (Ln = Er, Lu), K₃[Cr(NCS)₆] · 4H₂O, and 8-oxyquinoline (C₉H₇NO) were studied by X-ray diffraction. Crystals of complexes 1 and 2 are isostructural and crystallize in triclinic system, space group P\(\bar 1\), Z = 2. For complex 1: a = 9.0677(4) Å, b = 9.3115(4) Å, c = 16.9595 Å, α = 81.526(2)°, β = 86.153(2)°, γ = 83.879(2)°, V = 1406.33(10) ų, ρ_calc = 1.894 g/cm³; for complex 2: a = 9.0438(3) Å, b = 9.2880(3) Å, c = 16.9181(3) Å, α = 81.7250(10)°, β = 86.1600(10)°, γ = 83.8850(10)°, V = 1396.38(7) ų, ρ_calc = 1.926 g/cm³.     

Synthesis and X-ray diffraction study of Li(H<Subscript>3</Subscript>O)[UO<Subscript>2</Subscript>(C<Subscript>2</Subscript>O<Subscript>4</Subscript>)<Subscript>2</Subscript>(H<Subscript>2</Subscript>O)] · H<Subscript>2</Subscript>O

Single crystals of Li(H₃O)[UO₂(C₂O₄)₂(H₂O)] · H₂O (I) have been synthesized and studied by X-ray diffraction. Compound I crystallizes in the monoclinic crystal system with the unit cell parameters: a = 7.1682(10) Å, b = 29.639(6) Å, c = 6.6770(12) Å, β= 112.3(7)°, space group P 2₁/c, Z = 4, R = 4.36%. Structure I contains discrete mononuclear groups [UO₂(C₂O₄)₂(H₂O)]^2? ascribed to the crystal-chemical group AB ₂ ⁰¹ M¹ (A = UO₂ ²⁺, B⁰¹ =C₂O ₄ ^2? , M¹ = H₂O), which are “cross-linked” by the lithium ions into infinite layers {Li(UO₂)(C₂O₄)₂(H₂O)₂}^? perpendicular to [010]. The hydroxonium ions are located between adjacent uranium-containing layers. A hydrogen bond system involving water molecules, oxalate ions, and hydroxonium combines the anionic layers into a three-dimensional framework.     

Thermal Stability of newberyite Mg(PO<Subscript>3</Subscript>OH)·3H<Subscript>2</Subscript>O

The mineral newberyite Mg(PO₃OH)·3H₂O is a mineral that has been found in caves such as the Skipton Lava Tubes (SW of Ballarat, Victoria, Australia), Moorba Cave, (Jurien Bay, Western Australia) and in the Petrogale Cave (Madura, Eucla, Western Australia). Since these minerals contain water, the minerals lend themselves to thermal analysis. The mineral newberyite is found to decompose at 145 °C with a water loss of 31.96%, a result which is very close to the theoretical value. The result shows that the mineral is not stable in caves where the temperature exceeds this value. The implication of this result rests with the removal of kidney stones, which have the same composition as newberyite. Point heating focussing on the kidney stone results in the destruction of the kidney stone.     

Crystal structure of Mg pivalate hydrate Mg(H<Subscript>2</Subscript>O)<Subscript>6</Subscript>(Piv)<Subscript>2</Subscript> · 3H<Subscript>2</Subscript>O

Single crystals of Mg pivalate hydrate, Mg(H₂O)₆(Piv)₂ · 3H₂O (HPiv = (CH₃)₃CCOOH) are synthesized and their structure is determined by X-ray diffraction method. The crystals are rhombic: a = 10.917(2) Å, b = 12.625(2) Å, c = 31.394(8) Å, Z = 8, space group Pbca, R ₁ = 0.0525. The Mg atom has octahedral surrounding of the O atoms of water molecules (Mg-O 2.044–2.137 Å). The cationic chains of [Mg(H₂O)₆] _∞ ²⁺ lie in the voids of doubled network anionic layers of [(H₂O)₃(Piv)₂] _∞∞ ^2? . Inside the layer, the pivalate anions alternate with water molecules in the xy plane, being bonded to them by hydrogen bonds. The cationic chains and the anionic layers are united into layered packs by hydrogen bonds between coordinated water molecules and pivalate anions and between coordinated and crystal hydrate water molecules.     

Synthesis and crystal structure of the complex [Nd(2-EOBA)<Subscript>3</Subscript>(phen)(H<Subscript>2</Subscript>O)]<Subscript>2</Subscript> · H<Subscript>2</Subscript>O

A novel lanthanide complex of [Nd(2-EOBA)₃(phen)(H₂O)]₂ · H₂O (2-EOBA = 2-ethoxylbenzoate, phen = 1,10-phenanthroline), has been synthesized and structurally characterized by single crystal X-ray diffraction. The complex crystallizes in monoclinic, space group P2(1)/n with a = 14.7453(18) Å, b = 12.3628(15) Å, c = 19.473(2) Å, α = 90°, β = 93.349(2)°, γ = 90°. Two Nd³⁺ ions are connected together by two bridging 2-EOBA ligands and each Nd³⁺ ion is further coordinated by two chelating 2-EOBA ligands, one chelating phen molecule and one water molecule. The coordination number of Nd³⁺ ion is nine. The coordination geometry of Nd³⁺ ion is a distorted monocapped square-antiprism.     

Crystal structure of Cs[Gd(H<Subscript>2</Subscript>O)<Subscript>4</Subscript>Re<Subscript>6</Subscript>Te<Subscript>8</Subscript>(CN)<Subscript>6</Subscript>]·4H<Subscript>2</Subscript>O

The structure of the salt Cs[Gd(H₂O)₄Re₆Te₈(CN)₆]·4H₂O (space group P-1, a = 9.436(5) Å, b = 12.365(7) Å, c = 15.187(8)Å, α = 89.104(10)°, β = 86.996(10)°, γ = 82.304(9)°) has been established by single crystal XRD. The structure of the compound features layers involving Gd³⁺ cations bound to cluster anions [Re₆Te₈(CN)₆]^4? through cyanide groups. The interlayer space contains cesium cations and crystallization water molecules.     

Thermal stability of crandallite CaAl<Subscript>3</Subscript>(PO<Subscript>4</Subscript>)<Subscript>2</Subscript>(OH)<Subscript>5</Subscript>·(H<Subscript>2</Subscript>O)

Thermogravimetry combined with evolved gas mass spectrometry has been used to characterise the mineral crandallite CaAl₃(PO₄)₂(OH)₅·(H₂O) and to ascertain the thermal stability of this ‘cave’ mineral. X-ray diffraction proves the presence of the mineral and identifies the products of the thermal decomposition. The mineral crandallite is formed through the reaction of calcite with bat guano. Thermal analysis shows that the mineral starts to decompose through dehydration at low temperatures at around 139 °C and the dehydroxylation occurs over the temperature range 200–700 °C with loss of the OH units. The critical temperature for OH loss is around 416 °C and above this temperature the mineral structure is altered. Some minor loss of carbonate impurity occurs at 788 °C. This study shows the mineral is unstable above 139 °C. This temperature is well above the temperature in the caves of 15 °C maximum. A chemical reaction for the synthesis of crandallite is offered and the mechanism for the thermal decomposition is given.     

The crystal structure of [Mg(H<Subscript>2</Subscript>O)<Subscript>6</Subscript>][VO(edta)] · 3.5H<Subscript>2</Subscript>O

The crystal structure of complex [Mg(H₂O)₆][VO(edta)] · 3.5H₂O (I) was determined by X-ray diffraction study. The crystals are monoclinic, a = 6.779 Å, b = 13.373(6) Å, c = 25.054 Å, β = 96.55°, Z = 4, space group P2₁. The unit cell contains two independent [VO(edta)]^2? anions, two independent [Mg(H₂O)₆]²⁺ cations, and seven crystal-water molecules. The coordination polyhedron of each vanadium atom is formed by five donor atoms of the edta ligand (2N + 3O) (V(1)-N(1), 2.278 Å; V(1)-N(2), 2.149 Å; V(2)-N(3), 2.301 Å; V(2)-N(4), 2.165 Å; V-O(acet), 2.00 ± 0.02 Å) and the oxygen atom of the oxo group (V-O, 1.60 ± 0.01 Å). The edta ligands and the vanadium atom form three glycinate rings: two R-type rings and one G-type ring (one acetate branch remains free), as well as an E-type ring with an asymmetric gauche configuration. The [Mg(H₂O)₆] cations are slightly distorted octahedra (Mg-O, 2.013–2.132 Å, the OMgO angles are 86.6°–94.2°). The H₂O molecules form a bifurcate system of H-bonds. The crystals of compound I belong to OD-type structures with an incomplete ordering of layers.     

Synthesis of nanopowders and physicochemical properties of ceramic matrices of the LaPO<Subscript>4</Subscript>–YPO<Subscript>4</Subscript>–(H<Subscript>2</Subscript>O) and LaPO<Subscript>4</Subscript>–HoPO<Subscript>4</Subscript>–(H<Subscript>2</Subscript>O) systems

Sol-gel method was used to synthesize nanosize powders in the LaPO₄–YPO₄–(H₂O) and LaPO₄–HoPO₄–(H₂O) systems. Dense ceramic samples with high microhardness (up to 25 GPa) were formed from these powders by sintering at temperatures of up to 1600°C. The isomorphic capacity of the monoclinic LaPO₄ matrix for the second component (yttrium or holmium) simulating radioactive nuclides of the actinide-rare-earth fraction was found to be high. The composites are stable in aqueous solutions, which is indicated by the low concentration of lanthanum and yttrium ions during leaching test (~10^–7 g L^–1). The results obtained in the study can be used to develop new high-efficiency ceramic matrices for solidification of the actinide-rare-earth fraction of liquid wastes formed in processing of the spent nuclear fuel.     

Kinetics and thermodynamics of thermal decomposition of NH<Subscript>4</Subscript>NiPO<Subscript>4</Subscript>·6H<Subscript>2</Subscript>O

The single phase NH₄NiPO₄·6H₂O was synthesized by solid-state reaction at room temperature using NiSO₄·6H₂O and (NH₄)₃PO₄·3H₂O as raw materials. XRD analysis showed that NH₄NiPO₄·6H₂O was a compound with orthorhombic structure. The thermal process of NH₄NiPO₄·6H₂O experienced three steps, which involves the dehydration of the five crystal water molecules at first, and then deamination, dehydration of the one crystal water, intramolecular dehydration of the protonated phosphate groups together, at last crystallization of Ni₂P₂O₇. In the DTA curve, the two endothermic peaks and an exothermic peak, respectively, corresponding to the first two steps’ mass loss of NH₄NiPO₄·6H₂O and crystallization of Ni₂P₂O₇. Based on Flynn–Wall–Ozawa equation, and Kissinger equation, the average values of the activation energies associated with the thermal decomposition of NH₄NiPO₄·6H₂O, and crystallization of Ni₂P₂O₇ were determined to be 47.81, 90.18, and 640.09 kJ mol⁻¹, respectively. Dehydration of the five crystal water molecules of NH₄NiPO₄·6H₂O, and deamination, dehydration of the crystal water of NH₄NiPO₄·H₂O, intramolecular dehydration of the protonated phosphate group from NiHPO₄ together could be multi-step reaction mechanisms. Besides, the thermodynamic parameters (ΔH ^≠, ΔG ^≠, and ΔS ^≠) of the decomposition reaction of NH₄NiPO₄·6H₂O were determined.     

Synthesis and structure of the [Co(NioxH)<Subscript>2</Subscript>(Thio)<Subscript>2</Subscript>]<Subscript>2</Subscript>SO<Subscript>4</Subscript>·2H<Subscript>2</Subscript>O complex compound

A new Co(III) complex of 1,2-cyclohexanedionedioxime and thiocarbamide with an SO ₄ ^2? anion and solvation water molecules in the outer sphere has been synthesized and its structure has been defined. Orthorhombic crystals, a = 11.659(2) Å, b = 26.448(5) Å, c = 30.142(6) Å, V = 9295(3) Å ³, Z = 8, d_calc = 1.599 g/cm³, space group Pbca; final R index is 0.0578 for 8221 reflections with I > 2σ(I). In the octahedral Co(III) complex, two 1,2-cyclohexanedionedioxime residues lie in the equatorial plane, while two thiocarbamide molecules are in the axial plane. Intramolecular bonds: N-H…O and O-H…O type hydrogen bonds and π-π interactions that stabilize the complex cations. In crystal, the components are linked by N-H…O and O-H…O hydrogen bonds into a 3D framework.     

Synthesis and structural characterization of a novel tetranuclear Cu(II) complex: [Cu<Subscript>4</Subscript>L<Subscript>2</Subscript>(pic)<Subscript>4</Subscript>(H<Subscript>2</Subscript>O)<Subscript>2</Subscript>]·2H<Subscript>2</Subscript>O

A novel Salen-type bisoxime ligand, 6,6′-dimethoxy-2,2′-[(1,4-butylene)dioxybis(nitrilomethylidyne)]diphenol (H₂L) and its tetranuclear Cu(II) complex, [Cu₄L₂(pic)₄(H₂O)₂]·2H₂O, have been synthesized and characterized by elemental analyses, IR, TG-DTA and ¹H-NMR etc. The X-ray crystal structure of the complex reveals that formation of a tetranuclear structure, which consists of four copper(II) atoms, two pentadentate L²⁻units, four picratols, two coordinated water molecules and two crystallizing water molecules. Around four copper ions are all octahedral geometries. It was demonstrated that the picratols in the tetranuclear copper(II) complex show a novel tridentate coordination mode.     

Synthesis and thermal properties of Co<Subscript>2</Subscript>P<Subscript>2</Subscript>O<Subscript>7</Subscript> · 6H<Subscript>2</Subscript>O

The dependence of solid phase composition on the main parameters of the interaction in the CoSO₄-K₄P₂O₇-H₂O system was studied. The synthesis conditions were determined and a crystalline cobalt(II) diphosphat of the composition Co₂P₂O₇ · 6H₂O was synthesized. Its thermal properties were studied. The composition and the intervals, wherein the thermally stable products of partial and complete dehydration of Co₂P₂O₇ · 6H₂O are formed, were specified. The final heat treatment product, anhydrous α-Co₂P₂O₇, was identified and a sequence of the solid phase thermal transformations accompanying its formation was established.