NMR study of ligand exchange and electron self-exchange between oxo-centered trinuclear clusters [Fe3(μ3-O)(μ-O2CR)6(4-R'py)3](+/0)

The syntheses, single crystal X-ray structures, and magnetic properties of the homometallic μ?-oxo trinuclear clusters [Fe?(μ?-O)(μ-O?CCH?)?(4-Phpy)?](ClO?) (1) and [Fe?(μ?-O)(μ-O?CAd)?(4-Mepy)?](NO?) (2) are reported (Ad = adamantane). The persistence of the trinuclear structure within 1 and 2 in CD?Cl? and C?D?Cl? solutions in the temperature range 190-390 K is demonstrated by 1H NMR. An equilibrium between the mixed pyridine clusters [Fe?(μ?-O)(μ-O?CAd)?(4-Mepy)(3-x)(4-Phpy)(x)](NO?) (x = 0, 1, 2, 3) with a close to statistical distribution of these species is observed in CD?Cl? solutions. Variable-temperature NMR line-broadening made it possible to quantify the coordinated/free 4-Rpy exchanges at the iron centers of 1 and 2: k(ex)2?? = 6.5 ± 1.3 × 10?1 s?1, ΔH(?) = 89.47 ± 2 kJ mol?1, and ΔS(?) = +51.8 ± 6 J K?1 mol?1 for 1 and k(ex)2?? = 3.4 ± 0.5 × 10?1 s?1, ΔH(?) = 91.13 ± 2 kJ mol?1, and ΔS(?) = +51.9 ± 5 J K?1 mol?1 for 2. A limiting D mechanism is assigned for these ligand exchange reactions on the basis of first-order rate laws and positive and large entropies of activation. The exchange rates are 4 orders of magnitude slower than those observed for the ligand exchange on the reduced heterovalent cluster [Fe(III)?Fe(II)(μ?-O)(μ-O?CCH?)?(4-Phpy)?] (3). In 3, the intramolecular Fe(III)/Fe(II) electron exchange is too fast to be observed. At low temperatures, the 1/3 intermolecular second-order electron self-exchange reaction is faster than the 4-Phpy ligand exchange reactions on these two clusters, suggesting an outer-sphere mechanism: k?2?? = 72.4 ± 1.0 × 103 M?1 s?1, ΔH(?) = 18.18 ± 0.3 kJ mol?1, and ΔS(?) = -90.88 ± 1.0 J K?1 mol?1. The [Fe?(μ?-O)(μ-O?CCH?)?(4-Phpy)?](+/0) electron self-exchange reaction is compared with the more than 3 orders of magnitude faster [Ru?(μ?-O)(μ-O?CCH?)?(py)?](+/0) self-exchange reaction (ΔΔG(exptl)(?298) = 18.2 kJ mol?1). The theoretical estimated self-exchange rate constants for both processes compare reasonably well with the experimental values. The equilibrium constant for the formation of the precursor to the electron-transfer and the free energy of activation contribution for the solvent reorganization to reach the electron transfer step are taken to be the same for both redox couples. The larger ΔG(exptl)(?298) for the 1/3 iron self-exchange is attributed to the larger (11.1 kJ mol?1) inner-sphere reorganization energy of the 1 and 3 iron clusters in addition to a supplementary energy (6.1 kJ mol?1) which arises as a result of the fact that each encounter is not electron-transfer spin-allowed for the iron redox couple.     

Chelate control of diiron(I) dithiolates relevant to the [Fe-Fe]- hydrogenase active site

The reaction of Fe2(S2C2H4)(CO)6 with cis-Ph2PCH=CHPPh2 (dppv) yields Fe2(S2C2H4)(CO)4(dppv), 1(CO)4, wherein the dppv ligand is chelated to a single iron center. NMR analysis indicates that in 1(CO)4, the dppv ligand spans axial and basal coordination sites. In addition to the axial-basal isomer, the 1,3-propanedithiolate and azadithiolate derivatives exist as dibasal isomers. Density functional theory (DFT) calculations indicate that the axial-basal isomer is destabilized by nonbonding interactions between the dppv and the central NH or CH2 of the larger dithiolates. The Fe(CO)3 subunit in 1(CO)4 undergoes substitution with PMe3 and cyanide to afford 1(CO)3(PMe3) and (Et4N)[1(CN)(CO)3], respectively. Kinetic studies show that 1(CO)4 reacts faster with donor ligands than does its parent Fe2(S2C2H4)(CO)6. The rate of reaction of 1(CO)4 with PMe3 was first order in each reactant, k = 3.1 x 10(-4) M(-1) s(-1). The activation parameters for this substitution reaction, DeltaH = 5.8(5) kcal/mol and DeltaS = -48(2) cal/deg.mol, indicate an associative pathway. DFT calculations suggest that, relative to Fe2(S2C2H4)(CO)6, the enhanced electrophilicity of 1(CO)4 arises from the stabilization of a "rotated" transition state, which is favored by the unsymmetrically disposed donor ligands. Oxidation of MeCN solutions of 1(CO)3(PMe3) with Cp2FePF6 yielded [Fe2(S2C2H4)(mu-CO)(CO)2(dppv)(PMe3)(NCMe)](PF6)2. Reaction of this compound with PMe3 yielded [Fe2(S2C2H4)(mu-CO)(CO)(dppv)(PMe3)2(NCMe)](PF6)2.     

Reactions of hydridoirida-β-diketones with amines or with 2-aminopyridines: formation of hydridoirida-β-ketoimines, PCN terdentate ligands, and acyl decarbonylation

The hydridoirida-β-diketone [IrHCl{(PPh(2)(o-C(6)H(4)CO))(2)H}] (1) reacts with benzylamine (C(6)H(5)CH(2)NH(2)) to give the hydridoirida-β-ketoimine [IrHCl{(PPh(2)(o-C(6)H(4)CO))(PPh(2)(o-C(6)H(4)CNCH(2)C(6)H(5)))H}] (2), stabilized by an intramolecular hydrogen bond. 2 reacts with water to undergo hydrolysis and amine coordination giving hydridodiacylamino [IrH(PPh(2)(o-C(6)H(4)CO))(2)(C(6)H(5)CH(2)NH(2))] (3). Cyclohexylamine or dimethylamine lead to hydridodiacylamino [IrH(PPh(2)(o-C(6)H(4)CO))(2)L] (4-5). In chlorinated solvents hydridodiacylamino complexes undergo exchange of hydride by chloride to afford [IrCl(PPh(2)(o-C(6)H(4)CO))(2)L] (6-9). The reaction of 1 with hydrazine (H(2)NNH(2)) gives hydridoirida-β-ketoimine [IrHCl{(PPh(2)(o-C(6)H(4)CO))(PPh(2)(o-C(6)H(4)CNNH(2)))H}] (10), fluxional in solution with values for ΔH(?) of 2.5 ± 0.3 kcal mol(-1) and for ΔS(?) of -32.9 ± 3 eu. A hydrolysis/imination sequence can be responsible for fluxionality. 2-Aminopyridines (RHNC(5)H(3)R'N) react with 1 to afford cis-[IrCl(PPh(2)(o-C(6)H(4)CO))(PPh(2)(o-C(6)H(4)CHNRC(5)H(3)R'N))] (R = R' = H (11), R = CH(3), R' = H (12), R = H, R' = CH(3) (13)) containing new terdentate PCN ligands in a facial disposition and cis phosphorus atoms as kinetic products. The formation of 11-13 requires imination of the hydroxycarbene moiety of 1, coordination of the nitrogen atom of pyridine to iridium, and iridium to carbon hydrogen transfer. In refluxing methanol, complexes 11-13 isomerize to afford the thermodynamic products 14-16 with trans phosphorus atoms. Chloride abstraction from complexes [IrCl(PPh(2)(o-C(6)H(4)CO))(PPh(2)(o-C(6)H(4)CHNRC(5)H(4)N))] (R = H or CH(3)) leads to decarbonylation of the acylphosphine chelating group to afford cationic complexes [Ir(CO)(PPh(2)(o-C(6)H(4)))(PPh(2)(o-C(6)H(4)CHNRC(5)H(4)N))]A, 17 (R = H, A = ClO(4)) and 18 (R = CH(3), A = BF(4)) as a cis/trans = 4:1 mixture of isomers. Single crystal X-ray diffraction analysis was performed on 6, 9, 13, and 14.     

Integration of catalysis and analysis is the key: rapid and precise investigation of the catalytic asymmetric Gosteli-Claisen rearrangement

The kinetics of the Cu(II)(bisoxazoline)-catalyzed diastereo- and enantioselective Gosteli-Claisen rearrangement of 2-alkoxycarbonyl-substituted allyl vinyl ethers has been investigated by enantioselective on-column reaction gas chromatography (ocRGC). Enantioselective ocRGC integrates (stereoselective) catalysis and enantioselective chromatography in a single microcapillary, which is installed in a GC-MS for direct analysis of conversion and selectivity. Thus, this technique allows direct differentiation of thermal and stereoselectively catalyzed reaction pathways and determination of activation parameters and selectivities of the individual reaction pathways starting from stereoisomeric reactants with high precision. Two modes of operation of enantioselective ocRGC are presented to investigate noncatalyzed, i.e., conversion of isopropyl-2-(allyloxy)but-2Z-enoate 1 to isopropyl-3R,S-methyl-2-oxy-hex-5-enoate (±)-2 and the [Cu{(R,R)-Ph-box}](SbF(6))(2)-catalyzed Gosteli-Claisen rearrangement, i.e., conversion of isopropyl-2-(but-2'E-en-1-yloxy)but-2Z-enoate (E,Z)-3 to isopropyl-3S,4S-dimethyl-2-oxy-hex-5-enoate 4b. Eyring activation parameters have been determined by temperature-dependent measurements: Uncatalyzed rearrangement of 1 to (±)-2 gives ΔG(?) (298 K) = 114.1 ± 0.2 kJ·mol(-1), ΔH(?) = 101.1 ± 1.9 kJ·mol(-1), and ΔS(?) = -44 ± 5 J·(K·mol)(-1), and catalyzed rearrangement of (E,Z)-3 to 4b gives ΔG(?)(298 K) = 101.1 ± 0.3 kJ·mol(-1), ΔH(?) = 106.1 ± 6.6 kJ·mol(-1), and ΔS(?) = 17 ± 19 J·(K·mol)(-1).     

Degenerate molecular shuttles with flexible and rigid spacers

The preparation and dynamic behavior of degenerate rotaxane molecular shuttles are described in which a benzylic amide macrocycle moves back and forth between two naphthalimide-glycine units along a diphenylethyne spacer or an aliphatic spacer consisting of a C(9), C(12), or C(26) alkyl chain. Subtle differences in the (1)H NMR spectra of the rotaxanes can be related to the presence of conformers in which the macrocycle interacts simultaneously with both glycines, especially in the case of the C(9) spacer. The kinetic data of the shuttling behavior in the C(26) rotaxane were obtained from dynamic NMR spectroscopy. The Eyring activation parameters were found to be ΔH(?) = 10 ± 1 kcal mol(-1), ΔS(?) = -6.5 ± 2.0 cal mol(-1) K(-1), ΔG(?)(298) = 11.9 ± 0.2 kcal mol(-1). For the systems with the shorter spacers, the shuttling rates were higher. Also in the diphenylethyne, rotaxane shuttling is rapid on the NMR time scale, indicating that the rigid unit does not impose a large barrier to the translocation of the macrocycle.     

Thermochemistry and reaction paths in the oxidation reaction of benzoyl radical: C6H5C•(═O)

Alkyl substituted aromatics are present in fuels and in the environment because they are major intermediates in the oxidation or combustion of gasoline, jet, and other engine fuels. The major reaction pathways for oxidation of this class of molecules is through loss of a benzyl hydrogen atom on the alkyl group via abstraction reactions. One of the major intermediates in the combustion and atmospheric oxidation of the benzyl radicals is benzaldehyde, which rapidly loses the weakly bound aldehydic hydrogen to form a resonance stabilized benzoyl radical (C6H5C(?)═O). A detailed study of the thermochemistry of intermediates and the oxidation reaction paths of the benzoyl radical with dioxygen is presented in this study. Structures and enthalpies of formation for important stable species, intermediate radicals, and transition state structures resulting from the benzoyl radical +O2 association reaction are reported along with reaction paths and barriers. Enthalpies, ΔfH298(0), are calculated using ab initio (G3MP2B3) and density functional (DFT at B3LYP/6-311G(d,p)) calculations, group additivity (GA), and literature data. Bond energies on the benzoyl and benzoyl-peroxy systems are also reported and compared to hydrocarbon systems. The reaction of benzoyl with O2 has a number of low energy reaction channels that are not currently considered in either atmospheric chemistry or combustion models. The reaction paths include exothermic, chain branching reactions to a number of unsaturated oxygenated hydrocarbon intermediates along with formation of CO2. The initial reaction of the C6H5C(?)═O radical with O2 forms a chemically activated benzoyl peroxy radical with 37 kcal mol(-1) internal energy; this is significantly more energy than the 21 kcal mol(-1) involved in the benzyl or allyl + O2 systems. This deeper well results in a number of chemical activation reaction paths, leading to highly exothermic reactions to phenoxy radical + CO2 products.     

Probing the nature of the Co(III) ion in corrins: a comparison of the thermodynamics and kinetics of the ligand substitution reactions of aquacyanocobyrinic acid heptamethyl ester and stable yellow aquacyanocobyrinic acid heptamethyl ester

Equilibrium constants (log K) for the substitution of coordinated H(2)O in aquacyanocobyrinic acid heptamethyl ester (aquacyanocobester, ACCbs) and stable yellow aquacyanocobyrinic acid heptamethyl ester (stable yellow aquacyanocobester, ACSYCbs), in which oxidation of the C5 carbon of the corrin interrupts the normal delocalized system of corrins, by ligands with soft (CN(-), SO(3)(2-), and S(2)O(3)(2-)) and hard (NO(2)(-) and N(3)(-)) donors have been determined. The ligands with a harder donor atom (N in N(3)(-) and NO(2)(-)) produce ΔH values that are more negative in their reactions with ACSYCbs than with ACCbs. If the donor atom is softer (C in CN(-) and S in SO(3)(2-)), then ΔH is less positive, or more negative, for reactions with ACCbs than with ACSYCbs. The softer metal in ACCbs has a preference for softer ligands and the harder metal in ACSYCbs for the harder ligands. A kinetics study in which CN(-) substitutes H(2)O on Co(III) shows that ACCbs is more labile than ACSYCbs; the second-order rate constant k(II) is between 4.6 (at 5 °C) and 2.6 (at 35 °C) times larger. ΔH(?) for the reaction of CN(-) with ACCbs is smaller by some 12 kJ mol(-1) than that for the reaction with ACSYCbs, consistent with an earlier transition state in which bonding between the softer metal of ACCbs and the ligand is greater than that of ACSYCbs with its harder metal. This difference in ΔH(?) makes ACCbs over 100 times more labile, although the effect is masked by a ΔS(?) value that is over 30 J K(-1) mol(-1) more negative. There is a significant increase in the inertness of Co(III) upon a decrease in the extent of conjugation of the corrin ligand. Modifying the electronic structure of the equatorial ligand in the cobalt corrins can modify the thermodynamics and kinetics of its reactions with exogenous ligands.     

Stereochemistry and mechanism of the Brønsted acid catalyzed intramolecular hydrofunctionalization of an unactivated cyclic alkene

Through employment of deuterium-labeled substrates, the triflic acid catalyzed intramolecular exo addition of the X-H(D) (X=N, O) bond of a sulfonamide, alcohol, or carboxylic acid across the C=C bond of a pendant cyclohexene moiety was found to occur, in each case, with exclusive formation (≥90%) of the anti-addition product without loss or scrambling of deuterium as determined by (1)H and (2)H NMR spectroscopy and mass spectrometry analysis. Kinetic analysis of the triflic-acid-catalyzed intramolecular hydroamination of N-(2-cyclohex-2'-enyl-2,2-diphenylethyl)-p-toluenesulfonamide (1a) established the second-order rate law: rate=k(2)[HOTf][1a] and the activation parameters ΔH(++)=(9.7±0.5) kcal mol(-1) and ΔS(++)=(-35±5) cal K(-1) mol(-1). An inverse α-secondary kinetic isotope effect of k(D)/k(H) =(1.15±0.03) was observed upon deuteration of the C2' position of 1a, consistent with partial C-N bond formation in the highest energy transition state of catalytic hydroamination. The results of these studies were consistent with a mechanism for the intramolecular hydroamination of 1a involving concerted, intermolecular proton transfer from an N-protonated sulfonamide to the alkenyl C3' position of 1a coupled with intramolecular anti addition of the pendant sulfonamide nitrogen atom to the alkenyl C2' position.     

Structural and mechanistic information on the nitrosation of model Fe(II) complexes containing a biomimetic S4N chelate

In order to provide insight into the reaction pathways of nitrogen oxide redox species with [Fe-S] models that may parallel those existing in biology, the reactivity of the iron-sulfur species, {[Fe(II)(S(4)NEt(2)N)]}(2) (1) and [Fe(II)(CH(3)CN)(S(4)NEt(2)N)] (2), where (S(4)NEt(2)N)(2-) = 2,6-bis(2-mercaptophenylthiomethyl)-4-diethylaminopyridine(2-), towards NO(+) (nitrosation) has been studied mechanistically in acetonitrile and compared with the corresponding reactions with NO (nitrosylation). For the nitrosation of 1, the reaction takes place in two steps that correspond to the nitrosation of the mononuclear (2) and dinuclear (1) complexes, respectively. For the corresponding carbonyl complex [Fe(II)(CO)(S(4)NEt(2)N)] (3), the nitrosation reaction occurs in a single step. The relative reactivity of the iron-sulfur species is approximately (1)/(2)/(3) = 1/20/10. Activation parameters for the nitrosation of 1 (ΔH(#) = 27 ± 1 kJ mol(-1), ΔS(#) = -111 ± 2 J K(-1) mol(-1), and ΔV(#) = -19 ± 2 cm(3) mol(-1)), 2 (ΔH(#) = 46 ± 2 kJ mol(-1), ΔS(#) = -22 ± 7 J K(-1) mol(-1), and ΔV(#) = -9.7 ± 0.4 cm(3) mol(-1)) and 3 (ΔH(#) = 38 ± 1 kJ mol(-1), ΔS(#) = -44 ± 4 J K(-1) mol(-1), and ΔV(#) = -7.8 ± 0.3 cm(3) mol(-1)) were determined from variable temperature and pressure studies. The significantly negative ΔS(#) and ΔV(#) values found for the nitrosation reactions are consistent with an associative mechanism. A comparative study of the reactivity of the iron-sulfur species 1 to 3 towards NO(+) and NO is presented.     

Kinetic study of the thermal inactivation of glucose oxidase in the presence of denaturant and stabilizer by means of bioelectrocatalysis method

The thermal inactivation of glucose oxidase (GOD) in aqueous solution has been studied by the electrochemical method to follow the bioelectrocatalytic current due to the oxidation of glucose by GOD. Exponential time-dependent decrease in bioelectrocatalytic current, that is, the decrease in the enzymatic activity of GOD, was observed at given temperatures to determine the rate constant (k) of a simple inactivation process: GOD (active) → GOD (inactive). The ln[k] vs. T(-1) plots gave straight lines with all solution conditions tested, so that the resulting Arrhenius activation parameters including ΔH(?) and ΔS(?) can be compared with each other. In the 50 mmol/L phosphate buffer at 70°C, k was determined to be (6.6 ± 1.6)× 10(-4) s(-1), and ΔH(?) and ΔS(?) were calculated to be 202 ± 13 kJ mol(-1) and 282 ± 39 J K(-1) mol(-1), respectively. By addition of 3 mol/L guanidine hydrochloride, the k was increased to (4.7 ± 0.6)× 10(-3) s(-1), indicating that the denaturant accelerates the thermal inactivation. In this case, ΔH(?) was significantly reduced. By addition of 1 g/L ε-poly-L-lysine, which may adsorb onto the GOD surface to reduce the local disorder, k was decreased to (1.8 ± 0.6)× 10(-4) s(-1). In this case, ΔS(?) was reduced but ΔH(?) was not decreased much. This can be used as an important indication for selection of the enzyme stabilizer in solution.     

Excited state dynamics and activation parameters of remarkably slow photoinduced CO loss from (η⁶-benzene)Cr(CO)₃ in n-heptane solution: a DFT and picosecond-time-resolved infrared study

The electronic structure of (η?-benzene)Cr(CO)? has been calculated using density functional theory and a molecular orbital interaction diagram constructed based on the Cr(CO)? and benzene fragments. The highest occupied molecular orbitals are mainly metal based. The nature of the lowest energy excited states were determined by time-dependent density functional theory, and the lowest energy excited state was found to have significant metal to carbonyl charge transfer character. The photochemistry of (η?-benzene)Cr(CO)? was investigated by time-resolved infrared spectroscopy with picosecond time resolution. The low energy excited state was detected following irradiation at 400 nm, and this exhibited ν(CO) bands at lower energy than the equivalent ν(CO) bands of (η?-benzene)Cr(CO)?, consistent with metal to carbonyl charge transfer character, and is formed with excess vibrational energy, relaxing to the v = 0 vibrational state within 3 ps. The resulting "cold" excited state decays to form the CO-loss species (η?-benzene)Cr(CO)? in approximately 70% yield and to reform (η?-benzene)Cr(CO)? within 150 ps. The rates of relaxation from the vibrationally hot state to the cold excited state and its subsequent reaction to yield (η?-benzene)Cr(CO)? were measured over a range of temperatures from 274 to 320 K, and the activation parameters for both processes were obtained from Eyring plots. The vibrational relaxation exhibits a negative activation enthalpy ΔH(?) (-10 (±4) kJ mol?1) and a negative activation entropy ΔS(?) (-50 (±16) J mol?1 K?1). A significant barrier (ΔH(?) = +12 (±4) kJ mol?1) was obtained for the formation of (η?-benzene)Cr(CO)? with a ΔS(?) value close to zero. These data are used to propose a model for the CO-loss process to yield (η?-benzene)Cr(CO)? and to explain why low temperature irradiation of (η?-benzene)Cr(CO)? with light of wavelengths greater than 400 nm produced relatively minor amounts of (η?-benzene)Cr(CO)?.     

Theoretical calculation of the dehydrogenation of ethanol on a Rh/CeO2(111) surface

We applied periodic density-functional theory (DFT) to investigate the dehydrogenation of ethanol on a Rh/CeO2 (111) surface. Ethanol is calculated to have the greatest energy of adsorption when the oxygen atom of the molecule is adsorbed onto a Ce atom in the surface, relative to other surface atoms (Rh or O). Before forming a six-membered ring of an oxametallacyclic compound (Rh-CH2CH2O-Ce(a)), two hydrogen atoms from ethanol are first eliminated; the barriers for dissociation of the O-H and the beta-carbon (CH2-H) hydrogens are calculated to be 12.00 and 28.57 kcal/mol, respectively. The dehydrogenated H atom has the greatest adsorption energy (E(ads) = 101.59 kcal/mol) when it is adsorbed onto an oxygen atom of the surface. The dehydrogenation continues with the loss of two hydrogens from the alpha-carbon, forming an intermediate species Rh-CH2CO-Ce(a), for which the successive barriers are 34.26 and 40.84 kcal/mol. Scission of the C-C bond occurs at this stage with a dissociation barrier Ea = 49.54 kcal/mol, to form Rh-CH(2(a)) + 4H(a) + CO(g). At high temperatures, these adsorbates desorb to yield the final products CH(4(g)), H(2(g)), and CO(g).     

Rates of water exchange on the [Fe4(OH)2(hpdta)2(H2O)4]0 molecule and its implications for geochemistry

The ammonium salt of [Fe(4)O(OH)(hpdta)(2)(H(2)O)(4)](-) is soluble and makes a monospecific solution of [Fe(4)(OH)(2)(hpdta)(2)(H(2)O)(4)](0)(aq) in acidic solutions (hpdta = 2-hydroxypropane-1,3-diamino-N,N,N',N'-tetraacetate). This tetramer is a diprotic acid with pK(a)(1) estimated at 5.7 ± 0.2 and pK(a)(2) = 8.8(5) ± 0.2. In the pH region below pK(a)(1), the molecule is stable in solution and (17)O NMR line widths can be interpreted using the Swift-Connick equations to acquire rates of ligand substitution at the four isolated bound water sites. Averaging five measurements at pH < 5, where contribution from the less-reactive conjugate base are minimal, we estimate: k(ex)(298) = 8.1 (±2.6) × 10(5) s(-1), ΔH(++) = 46 (±4.6) kJ mol(-1), ΔS(++) = 22 (±18) J mol(-1) K(-1), and ΔV(++) = +1.85 (±0.2) cm(3) mol(-1) for waters bound to the fully protonated, neutral molecule. Regressing the experimental rate coefficients versus 1/[H(+)] to account for the small pH variation in rate yields a similar value of k(ex)(298) = 8.3 (±0.8) × 10(5) s(-1). These rates are ～10(4) times faster than those of the [Fe(OH(2))(6)](3+) ion (k(ex)(298) = 1.6 × 10(2) s(-1)) but are about an order of magnitude slower than other studied aminocarboxylate complexes, although these complexes have seven-coordinated Fe(III), not six as in the [Fe(4)(OH)(2)(hpdta)(2)(H(2)O)(4)](0)(aq) molecule. As pH approaches pK(a1), the rates decrease and a compensatory relation is evident between the experimental ΔH(++) and ΔS(++) values. Such variation cannot be caused by enthalpy from the deprotonation reaction and is not well understood. A correlation between bond lengths and the logarithm of k(ex)(298) is geochemically important because it could be used to estimate rate coefficients for geochemical materials for which only DFT calculations are possible. This molecule is the only neutral, oxo-bridged Fe(III) multimer for which rate data are available.     

C-H bond strengths and acidities in aromatic systems: effects of nitrogen incorporation in mono-, di-, and triazines

The negative ion chemistry of five azine molecules has been investigated using the combined experimental techniques of negative ion photoelectron spectroscopy to obtain electron affinities (EA) and tandem flowing afterglow-selected ion tube (FA-SIFT) mass spectrometry to obtain deprotonation enthalpies (Δ(acid)H(298)). The measured Δ(acid)H(298) for the most acidic site of each azine species is combined with the EA of the corresponding radical in a thermochemical cycle to determine the corresponding C-H bond dissociation energy (BDE). The site-specific C-H BDE values of pyridine, 1,2-diazine, 1,3-diazine, 1,4-diazine, and 1,3,5-triazine are 110.4 ± 2.0, 111.3 ± 0.7, 113.4 ± 0.7, 107.5 ± 0.4, and 107.8 ± 0.7 kcal mol(-1), respectively. The application of complementary experimental methods, along with quantum chemical calculations, to a series of nitrogen-substituted azines sheds light on the influence of nitrogen atom substitution on the strength of C-H bonds in six-membered rings.     

A high-valent iron-oxo corrolazine activates C-H bonds via hydrogen-atom transfer

Oxidation of the Fe(III) complex (TBP(8)Cz)Fe(III) [TBP(8)Cz = octakis(4-tert-butylphenyl)corrolazinate] with O-atom transfer oxidants under a variety of conditions gives the reactive high-valent Fe(O) complex (TBP(8)Cz(+?))Fe(IV)(O) (2). The solution state structure of 2 was characterized by XAS [d(Fe-O) = 1.64 ?]. This complex is competent to oxidize a range of C-H substrates. Product analyses and kinetic data show that these reactions occur via rate-determining hydrogen-atom transfer (HAT), with a linear correlation for log k versus BDE(C-H), and the following activation parameters for xanthene (Xn) substrate: ΔH(++) = 12.7 ± 0.8 kcal mol(-1), ΔS(++) = -9 ± 3 cal K(-1) mol(-1), and KIE = 5.7. Rebound hydroxylation versus radical dimerization for Xn is favored by lowering the reaction temperature. These findings provide insights into the factors that control the intrinsic reactivity of Compound I heme analogues.     

DFT investigation of structural, electronic, and catalytic properties of diiron complexes related to the [2Fe](H) subcluster of Fe-only hydrogenases

Hydrogenases catalyze the reversible oxidation of dihydrogen to protons and electrons. The structures of two Fe-only hydrogenases have been recently reported [Peters, J. W.; Lanzilotta, W. N.; Lemon, B. J.; Seefeldt, L. C. Science 1998, 282, 1853-1858. Nicolet, Y.; Piras, C.; Legrand, P.; Hatchikian, E. C.; Fontecilla-Camps, J. C. Structure 1999, 7, 13-23], showing that the likely site of dihydrogen activation is the so-called [2Fe](H) cluster, where each Fe ion is coordinated by CO and CN(-) ligands and the two metals are bridged by a chelating S-X(3)-S ligand. Moreover, the presence of a water molecule coordinated to the distal Fe2 center suggested that the Fe2 atom could be a suitable site for binding and activation of H(2). In this contribution, we report a density functional theory investigation of the structural and electronic properties of complexes derived from the [(CO)(CH(3)S)(CN)Fe(II)(mu-PDT)Fe(II)(CO)(2)(CN)](-1) species, which is related to the [2Fe](H) cluster observed in Fe-only hydrogenases. Our results show that the structure of the [2Fe](H) cluster observed in the enzyme does not correspond to a stable form of the isolated cluster, in the absence of the protein. As a consequence, the reactivity of [(CO)(CH(3)S)(CN)Fe(II)(mu-PDT)Fe(II)(CO)(2)(CN)](-1) derivatives in solution may be expected to be quite different from that of the active site of Fe-only hydrogenases. In fact, the most favorable path for H(2) activation involves the two metal atoms and one of the bridging S atoms and is associated with a very low activation energy (5.3 kcal mol(-1)). The relevance of these observations for the catalytic properties of Fe-only hydrogenases is discussed in light of available experimental and theoretical data.     

Unsaturation in binuclear cyclopentadienyliron carbonyls

The binuclear cyclopentadienyliron carbonyls Cp2Fe2(CO)n (n = 4, 3, 2, 1; Cp = eta(5)-C5H5) have been studied by density functional theory (DFT) using the B3LYP and BP86 methods. The trans- and cis-Cp2Fe2(CO)2(mu-CO)2 isomers of Cp2Fe2(CO)4 known experimentally are predicted by DFT methods to be genuine minima with no significant imaginary vibrational frequencies. The energies of these two Cp2Fe2(CO)2(mu-CO)2 structures are very similar, consistent with the experimental observation of an equilibrium between these isomers in solution. An intermediate between the interconversion of the trans- and cis-Cp2Fe2(CO)2(mu-CO)2 dibridged isomers of Cp2Fe2(CO)4 can be the trans unbridged isomer of Cp2Fe2(CO)4 calculated to be 2.3 kcal/mol (B3LYP) or 9.1 kcal/mol (BP86) above the global minimum trans-Cp2Fe2(CO)2(mu-CO)2. For the unsaturated Cp2Fe2(CO)3, the known triplet isomer Cp2Fe2(mu-CO)3 with an Fe=Fe double bond similar to the O=O double bond in O2 is found to be the global minimum. The lowest-energy structure for the even more unsaturated Cp2Fe2(CO)2 is a dibridged structure Cp2Fe2(mu-CO)2, with a short Fe-Fe distance suggestive of the Fe[triple bond]Fe triple bond required to give both Fe atoms the favored 18-electron configuration. Singlet and triplet unbridged structures for Cp2Fe2(CO)2 were also found but at energies considerably higher (20-50 kcal/mol) than that of the global minimum Cp2Fe2(mu-CO)2. The lowest-energy structure for Cp2Fe2(CO) is the triplet unsymmetrically bridged structure Cp2Fe2(mu-CO), with a short Fe-Fe distance (approximately 2.1 A) suggestive of the sigma + 2pi + (2/2)delta Fe[quadruple bond]Fe quadruple bond required to give both Fe atoms the favored 18-electron rare gas configuration.     

Modeling the cis-oxo-labile binding site motif of non-heme iron oxygenases: water exchange and oxidation reactivity of a non-heme iron(IV)-oxo compound bearing a tripodal tetradentate ligand

The spectroscopic and chemical characterization of a new synthetic non-heme iron(IV)-oxo species [Fe(IV)(O)((Me,H) Pytacn)(S)](2+) (2, (Me,H)Pytacn=1-(2'-pyridylmethyl)-4,7-dimethyl-1,4,7-triazacyclononane, S=CH(3)CN or H(2)O) is described. Complex 2 was prepared by reaction of [Fe(II)(CF(3)SO(3))(2)((Me,H) Pytacn)] (1) with peracetic acid. Complex 2 bears a tetradentate N(4) ligand that leaves two cis sites available for binding an oxo group and a second external ligand but, unlike the related iron(IV)-oxo species with tetradentate ligands, it is remarkably stable at room temperature (t(1/2)>2 h at 288 K). Its ability to exchange the oxygen atom of the oxo ligand with water has been analyzed in detail by means of kinetic studies, and a mechanism is proposed on the basis of DFT calculations. Hydrogen-atom abstraction from C-H bonds and oxygen-atom transfer to sulfides by 2 have also been studied. Despite its thermal stability, 2 proves to be a very powerful oxidant that is capable of breaking the strong C-H bond of cyclohexane (bond dissociation energy=99.3 kcal mol(-1)).     

Structural criteria for the rational design of selective ligands. 3. Quantitative structure-stability relationship for iron(III) complexation by tris-catecholamide siderophores

We present an extended MM3 model for catecholamide ligands and their Fe(3+) complexes and the application of this model to understand how ligand architecture effects Fe(3+) binding affinity. Force field parameters were fit to geometries and energies from electronic structure calculations, and to crystal structure data. Optimized geometries are reported for phenol, acetamide, the phenol-phenol dimer, the acetamide-phenol dimer, and N-methylsalicylamide (HMSA) at the BLYP/DZVP2/A2 level of theory. Optimized geometries and relative energies are reported for the pseudo-octahedral ground state and the trigonal planar transition state of [Fe(CAT)(3)](3)(-) at the VWN/DZVP2/A1 level of theory. The MM3 model is validated by comparison of calculated structures with crystal structures containing 1,2-dihydroxybenzene (H(2)CAT) and 2,3-dihydroxy-N-methylbenzamide (H(2)MBA) fragments, crystal structures of [Fe(CAT)(3)](3)(-) and tris-catecholamide Fe(3+) complexes, and comparison of MM3 (6.8 kcal/mol) and VWN (5.9 kcal/mol) barriers for intramolecular octahedral inversion in [Fe(CAT)(3)](3)(-). The MM3 model also rationalizes the higher inversion barrier (14 to 18 kcal/mol) reported for [Ga(N,N-diisopropylterephthalamide)(3)](3)(-) ([Ga(DIPTA)(3)](3)(-)). Conformational searches were performed on enterobactin (H(6)ENT), 1,3,5-tris(2,3-dihydroxybenzamidomethyl)-2,4,6-triethylbenzene (H(6)EMECAM), 1,3,5-tris(2,3-dihydroxybenzamidomethyl)-2,4,6-trimethylbenzene (H(6)MMECAM), 1,3,5-tris(2,3-dihydroxybenzamidomethyl)benzene (H(6)MECAM), and 1,5,9-N,N',N' '-tris(2,3-dihydroxybenzoyl)cyclotriazatridecane (H(6)-3,3,4-CYCAM) and Fe(3+) complexes with each of these ligands. A conformational search also was done on the Fe(3+) complex with the 2,2',2' '-tris(2,3-dihydroxybenzamido)triethylammonium cation (H(7)TRENCAM(+)). The relationship between calculated steric energies and measured thermodynamic quantities is discussed, and linear correlations between formation constants and steric energy differences are reported. Extrapolation to zero strain predicts formation constants 8 +/- 5 orders of magnitude higher than that exhibited by ENT (10(49)) are possible. This prediction is supported by a formation constant of 10(63) estimated from the formation constant of [Fe(2,3-dihydroxy-N,N-dimethylbenzamide)(3)](3)(-) ([Fe(DMBA)(3)](3)(-)) by considering the entropic consequences of connecting three DMBA ligands to a rigid backbone. Structural criteria for the identification of improved tris-catecholate ligand architectures are presented.     

Modeling [Fe-Fe] hydrogenase: evidence for bridging carbonyl and distal iron coordination vacancy in an electrocatalytically competent proton reduction by an iron thiolate assembly that operates through Fe(0)-Fe(II) levels

IR spectroelectrochemistry of Fe4{Me(CH2S)3}2(CO)8 (4Fe6S) in the nu(CO) region shows that the neutral and anion forms have all their CO groups terminally bound to the Fe atoms; however, for the dianion there is a switch of the coordination mode of at least one of the CO groups. The available structural and nu(CO) spectra are closely reproduced by density-functional theory calculations. The calculated structure of 4Fe6S2- closely mirrors that of the diiron subsite of the [Fe-Fe] hydrogenase H cluster with a bridging CO group and an open coordination site on the outer Fe atom of pairs of dithiolate-bridged Fe0FeII subunits connected by two bridging thiolates. Geometry optimization based on the all-terminal CO isomer of 4Fe6S2- does not give a stable structure but reveals a second-order saddle point ca. 11.53 kcal mol(-1) higher in energy than the CO-bridged form. Spectroelectrochemical studies of electrocatalytic proton reduction by 4Fe6S show that slow turnover from the primary reduction process (E1/2'=-0.71 V vs Ag/AgCl) involves rate-limiting protonation of 4Fe6S- followed by reduction to H:4Fe6S-. Rapid electrocatalytic proton reduction is obtained at potentials sufficient to access 4Fe6S2-, where the rate of dihydrogen elimination from the FeIIFeII core of 4Fe6S is ca. 500 times faster than that from the FeIFeI core of Fe2(mu-S(CH2)3S)(CO)6. The dramatically increased rate of electrocatalysis obtained from 4Fe6S over all previously identified model compounds appears to be related to the features uniquely common between it and the H-cluster, namely, that turnover involves the same formal redox states of the diiron unit (FeIFeII and Fe0FeII), the presence of an open site on the outer Fe atom of the Fe0FeII unit, and the thiolate-bridge to a second one-electron redox unit.