Label-free and sequence-specific DNA detection down to a picomolar level with carbon nanotubes as support for probe DNA

This study describes a simple and label-free electrochemical impedance spectroscopic (EIS) method for sequence-specific detection of DNA by using single-walled carbon nanotubes (SWNTs) as the support for probe DNA. SWNTs are confined onto gold electrodes with mixed self-assembly monolayers of thioethanol and cysteamine. Single-stranded DNA (ssDNA) probe is anchored onto the SWNT support through covalent binding between carboxyl groups at the nanotubes and amino groups at 5′ ends of ssDNA. Hybridization of target DNA with the anchored probe DNA greatly increases the interfacial electron-transfer resistance (R_et) at the double-stranded DNA (dsDNA)-modified electrodes for the redox couple of Fe(CN)₆^3−/4−, which could be used for label-free and sequence-specific DNA detection. EIS results demonstrate that the utilization of SWNTs as the support for probe DNA substantially increases the surface loading of probe DNA onto electrode surface and thus remarkably lowers the detection limit for target DNA. Under the conditions employed here, R_et is linear with the concentration of target DNA within a concentration range from 1 to 10 pM with a detection limit down to 0.8 pM (S/N = 3). This study may offer a novel and label-free electrochemical approach to sensitive sequence-specific DNA detection.     

Functionalization of multiwalled carbon nanotubes and their pH-responsive hydrogels with amyloid fibrils

New biocompatible, pH-responsive, and fully fibrous hydrogels have been prepared based on amyloid fibrils hybridized and gelled by functionalized multiwalled carbon nanotubes (MWNTs) far below the gelling concentration of amyloid fibrils. Sulfonic functional groups were introduced on the surfaces of MWNTs either by a covalent diazonium reaction or by physical π-π interactions. The presence of the isoelectric point of amyloid fibrils allows a reversible gelling behavior through ionic interactions with functionalized MWNTs.     

Nitrogen-doped multiwalled carbon nanotubes and their electrocatalysis towards oxidation of NO

Nitrogen-doped multiwalled carbon nanotubes (N-MWCNTs) were synthesized by thermal decomposition of pyridine and iron phthalocyanine over an iron catalyst in an atmosphere of ammonia. The N-MWCNTs thus obtained were analyzed by X-ray photoelectron spectroscopy. They were found to contain three types of nitrogen (N) atoms, namely pyridine-like, graphite-like, and molecular N. The effect of the pyridine-like N and the graphite-like N was investigated. The pyridine-like N is absorbing nitric oxide (NO) more easily than the graphite-like N. The N-MWCNTs with higher N content (especially the pyridine-like N) have higher catalytic activity (in terms of electrooxidation of NO) than those containing less N. The N-MWCNTs with high levels of pyridine N were incorporated into an electrode which suitable for sensing NO and for removal of NO due to its excellent electrocatalytic activity.     

Nitrogen adsorption characterization of aligned multiwalled carbon nanotubes and their acid modification

Aligned multiwalled carbon nanotube (CNT) arrays were synthesized by using an iron-based sol-gel catalyst and acetylene as the precursor. These CNTs show high purity, uniform diameters and pore-wall thickness. Low temperature nitrogen adsorption was employed to characterize the structural and surface properties of the as-synthesized sample and that modified with boiling concentrated nitric acid. The adsorption characteristics of the as-synthesized and modified CNTs were thoroughly investigated. High-resolution comparative alpha(s)-plot showed that the nitrogen adsorption on CNTs takes place via a multistage mechanism closely related to their structures. It was also found that the acid modification significantly increased the adsorption energy and enhanced the adsorption capacity under low pressures. High-resolution comparative method provided valuable insights about the surface and pore structures of CNTs.     

Enzymatic degradation of multiwalled carbon nanotubes

Because of their unique properties, carbon nanotubes and, in particular, multiwalled carbon nanotubes (MWNTs) have been used for the development of advanced composite and catalyst materials. Despite their growing commercial applications and increased production, the potential environmental and toxicological impacts of MWNTs are not fully understood; however, many reports suggest that they may be toxic. Therefore, a need exists to develop protocols for effective and safe degradation of MWNTs. In this article, we investigated the effect of chemical functionalization of MWNTs on their enzymatic degradation with horseradish peroxidase (HRP) and hydrogen peroxide (H(2)O(2)). We investigated HRP/H(2)O(2) degradation of purified, oxidized, and nitrogen-doped MWNTs and proposed a layer-by-layer degradation mechanism of nanotubes facilitated by side wall defects. These results provide a better understanding of the interaction between HRP and carbon nanotubes and suggest an eco-friendly way of mitigating the environmental impact of nanotubes.     

Electro-oxidation of amino-functionalized multiwalled carbon nanotubes

We report the electrochemistry of amino-functionalized multiwalled carbon nanotubes (MWCNTs-NH₂) in the pH range from 0.3 to 6.4 using quantitative cyclic voltammetry (CV) and single entity electrochemistry measurements, making comparison with non-functionalized MWCNTs. CV showed the latter to both catalyze the solvent (water) decomposition and to undergo irreversible electro-oxidation forming oxygen containing surface functionality. The MWCNTs-NH₂ additionally undergo an irreversible oxidation to an extent which is dependent on the pH of the solution, reflecting the variable amount of deprotonated amino groups present as a function of pH. Nano-impact experiments conducted at the single particle level confirmed the oxidation of both types of MWCNTs, showing agreement with the CV. The pK_a of the amino groups in MWCNTs was determined via both electrochemical methods giving consistent values of ca. 2.5.

A new and generic approach to the study of the oxidation of different forms of CNTs is found by using quantitative single entity and ensemble electrochemistry measurements.     

Sonochemical oxidation of multiwalled carbon nanotubes

Functionalization of carbon nanotubes (CNTs) is important for enhancing deposition of metal nanoparticles in the fabrication of supported catalysts. A facile approach for oxidizing CNTs is presented using a sonochemical method to promote the density of surface functional groups. This was successfully employed in a previous study [J. Phys. Chem. B 2004, 108, 19255] to prepare highly dispersed, high-loading Pt nanoparticles on CNTs as fuel cell catalysts. X-ray photoelectron spectroscopy (XPS), transmission electron microscopy, cyclic voltammetry, and settling speeds were used to characterize the degree of surface functionalization and coverage. The sonochemical method effectively functionalized the CNTs. A mixture of -C-O-/-C=O and -COO- was observed along with evidence for weakly bound CO at longer treatment times. The integrated XPS C 1s core level peak area ratios of the oxidized-to-graphitic C oxidation states, as well as the atom % oxygen from the O 1s level, showed an increase in peak intensity (attributed to -CO(x)()) with increased sonication times from 1 to 8 h; the increase in C surface oxidation correlated well with the measured atom %. Most of the CNT surface oxidation occurred between 1 and 2 h. The sonochemically treated CNTs were also studied by cyclic voltammetry and settling experiments, and the results were consistent with the XPS observations.     

Water-soluble multiwalled carbon nanotubes functionalized with sulfonated polyaniline

Multiwalled carbon nanotubes (MWNTs) functionalized with a water-soluble conducting polymer, sulfonated polyaniline (SPAN), were prepared by in situ polymerization of aniline followed by sulfonation with chlorosulfonic acid in an inert solvent and by hydrolysis in water. Electron microscopy, laser Raman spectroscopy, X-ray photoelectron spectroscopy, and UV-vis absorption spectroscopy were employed to characterize the morphology and chemical structure of the resulting product. The results show that the quinonoid structure of SPAN preferentially interacts with the nanotubes and is stabilized by strong pi-pi interaction between two components. The structure of MWNTs was not perturbed by the incorporation of SPAN, since the pi-pi interaction between MWNTs and SPAN is much weaker in comparison to that of the carbon covalent bond. The SPAN functionalized MWNTs are highly dispersible in water, thus opening new possibilities for their prospective technological applications.     

Hybridization detection of DNA by measuring organic small molecule amplified resonance light scattering signals

The interaction of organic small molecules (OSMs) with a biological molecule is very important. In this contribution, quinone-imine dyes including Acridine Yellow (AY), Neutral Red (NR), Acridine Orange (AO), Brilliant Cresyl Blue (BCB), Thionin (TN), Azur A (AA), Azur B (AB), and Methylene Blue (MB) respectively with double strand DNA (dsDNA) and single strand DNA (ssDNA) were investigated based on the measurements of enhanced resonance light scattering (RLS) and TEM. Mechanism investigations have shown that groove binding occurs between dsDNA and these OSMs, which depends on G-C sequences of dsDNA and the volumes of OSMs. With the amplified RLS signals resulting from the interactions of OSMs with DNA, a new technique has been proposed to detect the hybridization and mismatch of DNA labeling neither the target nor the probe DNA. The results have suggested that the extent of the amplified RLS signals of dsDNA by AY is the maximum among these eight OSMs, and therefore, it has been selected as a typical model system for further discussions.     

Controlled modification of multiwalled carbon nanotubes with Zno nanostructures

Multiwalled carbon nanotubes (MWNTs) have been successfully modified with ZnO nanostructures by zinc-ammonitum complex ion covalently attached to the MWNTs through the C-N bonds. Flower-like ZnO on the tips of MWNTs and ZnO nanoparticles on the surface of MWNTs have been obtained, respectively, via adjusting the reaction time. The modified MWNTs have been characterized with X-ray diffraction, scanning electron and transmission electron microscopy. A growth mechanism has been proposed in which the soaking time plays a key role in controlling the size, morphology, and site of ZnO nanostructures. Photoluminescence properties of the as-synthesized products have also been investigated.     

Determination of catecolamines on electrodes modified with multiwalled carbon nanotubes

The electrochemical behavior of several biologically active catecolamines in studied on a glassy carbon electrode with the surface preliminarily modified by a composite film containing preliminarily carboxylated multi-walled carbon nanotubes (MWNT). The coatings are characterized by the methods of cyclic voltammetry and scanning microscopy. It is shown that the use of hybrid composites prepared by immobilizing MWNT and gold nanoparticles into the film of poly(isonicotinic) acid provides the high diffusion permeability of the surface layers and the efficiency of the electron transfer as regards catecolamines. The possibility of using these electrodes for selective determination of these substances in drugs widely used in the modern practical medicine is demonstrated.     

DNA functionalized single-walled carbon nanotubes for electrochemical detection

Single-walled carbon nanotubes (SWNTs) were effectively dispersed and functionalized by wrapping with single-stranded DNA (ssDNA). The ssDNA-SWNTs attach strongly on glass substrate and easily form a uniform film, making it possible for electrochemical analysis and sensing. The film was fabricated into a working electrode, which exhibited good electrochemical voltammetric properties, such as flat and wide potential window, well-defined quasi-reversible voltammetric responses, and quick electron transfer for a Fe(CN)6(3-)/Fe(CN)6(4) system, indicating that the ssDNA-SWNTs film should be a good analytical electrode for electrochemical detection or sensing. This was demonstrated by highly selective and sensitive detection of a low concentration of dopamine in the presence of excess ascorbic acid.     

Surface structure and adsorption properties of multiwalled carbon nanotubes

The pore structure, sorption parameters, and chemical composition of the surface of multiwalled carbon nanotubes synthesized by catalytic pyrolysis were determined. The dependences of the amount of cholic acid adsorbed by the nanotube surface on time, pH, and concentration of an equilibrium solution were studied. Physical adsorption of cholic acid is mainly the outcome of nonspecific interactions between the acid and the surface of the nanotubes. Published in Russian in Izvestiya Akademii Nauk. Seriya Khimicheskaya, No. 10, pp. 1712–1715, October, 2006.     

Electroactive films of heme protein-coated multiwalled carbon nanotubes

A novel method for fabricating protein-MWNT films on pyrolytic graphite (PG) electrodes was described. Positively charged hemoglobin (Hb) or myoglobin (Mb) in buffers at pH 5.5 or 5.0 was first adsorbed on the surface of acid-pretreated, negatively charged multiwalled carbon nanotubes (MWNTs) mainly by electrostatic interaction, forming a core-shell structure. The aqueous dispersion of protein-coated MWNTs was then cast on PG electrodes, forming protein-MWNT films after evaporation of solvent. The protein-MWNT films exhibited a pair of well-defined, quasi-reversible cyclic voltammetric peaks, characteristic of heme Fe(III)/Fe(II) redox couples. The protein films were characterized by voltammetry, UV-vis spectroscopy, and scanning electron microscopy (SEM). This approach for assembly of protein-MWNT films showed higher surface concentration of electroactive proteins than the simple cast method, and the amount of proteins in the films could be controlled more precisely compared with the dipping method. Furthermore, the film assembly using this method was more stable than that using simple cast method. The proteins in MWNT films retained their near-native structure, and electrochemically catalyzed reduction of oxygen and hydrogen peroxide, suggesting the potential applicability of the films as the new type of biosensors or bioreactors based on direct electrochemistry of enzymes.     

Microwave-assisted covalent sidewall functionalization of multiwalled carbon nanotubes

Thermal cycloaddition of 1,3-dipolar azomethine ylides to the sidewalls of multiwalled carbon nanotubes (MWNTs) has been used to prepare MWNTs that contain 2-methylenethiol-4-(4-octadecyloxyphenyl) (4), N-octyl-2-(4-octadecyloxyphenyl) (5) or 2-(4-octadecyloxyphenyl)pyrrolidine (6) units. All these contain the 4-octadecyloxyphenyl substituent that acts as a solubilizing group. Microwave (MiW)-assisted heating was found to be highly efficient for soluble MWNTs, for which the amount of added groups after only 2 h of MiW heating at 200 degrees C, determined by using thermogravimetric analysis, was found to be in the same range as that obtained after 100-120 h of conventional heating of soluble and insoluble MWNTs. Solubility is a key feature for a successful MiW-heated reaction; MWNTs insoluble in the reaction medium yielded considerably less addends in the MiW-heated reactions than in the conventionally heated reaction. The location and even distribution of the pyrrolidine units over the outermost layer of the MWNTs was verified by transmission electron microscopy analysis of 4 that had been treated with gold nanoparticles and thoroughly washed to remove gold particles adsorbed on nonfunctionalized parts of the MWNTs.