GC‐MSn and LC‐MS/MS couplings for the identification of degradation products resulting from the ozonation treatment of Acetochlor

The degradation of the chloracetamide herbicide acetochlor has been studied under simulated ozonation treatment plant conditions. The degradation of acetochlor included the formation of several degradation products that were identified using GC/ion‐trap mass spectrometry with EI and CI and HPLC/electrospray‐QqTOF mass spectrometry. Thirteen ozonation products of acetochlor have been identified. Ozonation of the deuterated herbicide combined to MSⁿ and high‐resolution mass measurement allowed effective characterization of the degradation products. At the exception of one of them, the product B (2‐chloro‐2', ethyl‐6', methyl‐acetanilide), none of the identified degradation products has been already reported in the literature. Post‐ozonation kinetics studies revealed that the concentrations of most degradation products evolved noticeably with time, particularly during the first hours following the ozonation treatment. This raises concerns about the fate of degradation products in the effluents of treatment plants and suggests the need for a better control on these products if their toxicity was demonstrated. Copyright © 2012 John Wiley & Sons, Ltd.     

Laboratory studies of the ·OH‐initiated photooxidation of ethyl‐n‐butyl ether and di‐n‐butyl ether

Oxygenated compounds such as ethers and alcohols are used as gasoline additives and industrial solvents. However, despite their widespread use, the atmospheric reaction mechanisms of some of these compounds are unknown. This study examines the ^·OH‐initiated gas‐phase removal mechanisms of ethyl‐n‐butyl ether (ENBE) and di‐n‐butyl ether (DNBE) utilizing gas chromatography–mass spectrometry techniques. The primary products and molar yields from the hydroxyl‐radical–initiated photooxidation of ENBE in the presence of nitric oxide were acetaldehyde (0.173 ± 0.012), ethyl formate (0.219 ± 0.033), butyraldehyde (0.076 ± 0.004), butyl formate (0.241 ± 0.009), butyl acetate (0.032 ± 0.001), and ethyl butyrate (0.0044 ± 0.0006). From the calculated molar yields, approximately 45.5% of the reacted carbon were recovered. The primary products and molar yields from the DNBE and hydroxyl radical reaction in the presence of nitric oxide were propionaldehyde (0.379 ± 0.022), butyraldehyde (0.119 ± 0.003), butyl formate (0.410 ± 0.009), and butyl butyrate (0.019 ± 0.001). Approximately 47.7% of the reacted DNBE were recovered. The chemical mechanisms are presented to explain the formation of these products. In addition, the importance of the isomerization and nitrate/nitrite formation pathways in the reactions of large ethers are discussed. © 2001 John Wiley & Sons, Inc. Int J Chem Kinet 33: 328–341, 2001     

Identification of hydroxyl radical oxidation products of N‐hexanoyl‐homoserine lactone by reversed‐phase high‐performance liquid chromatography coupled with electrospray ionization tandem mass spectrometry

A reversed‐phase high‐performance liquid chromatography/electrospray tandem mass spectrometry method was developed for the characterization of hydroxyl radical oxidation products of N‐hexanoyl‐homoserine lactone (C6‐HSL), a member of the N‐acylhomoserine lactone (AHL) class of microbial quorum‐sensing signaling molecules identified in many Gram‐negative strains of bacteria. Six products were identified: four with molecular weight (MW) of 213 and two with MW of 260. The characteristic product ions formed through collision‐induced dissociation (CID) provided diagnostic structural information. One of the photolysis products was determined to be N‐(3‐oxohexanoyl)homoserine lactone (3OC6‐HSL), a highly active quorum‐sensing signal, by comparison with a reference standard. Three structural isomers with the same mass as 3OC6‐HSL were identified as acyl side chain oxidized C6‐HSL (keto/enol functionalized) by accurate mass measurement and the structures of these products were proposed from CID spectral interpretation. Two structural isomers formed from concurrent oxidation and nitration of C6‐HSL were also observed and their structures were postulated based on CID spectra. In addition to the six hydroxyl radical oxidation products formed from the C6‐HSL precursor, five additional compounds generated from combined oxidation and lactonolysis of C6‐HSL were identified and structures were postulated. Copyright © 2009 John Wiley & Sons, Ltd.     

Thermal degradation of β‐carotene studied by ion mobility atmospheric solid analysis probe mass spectrometry: full product pattern and selective ionization enhancement

Atmospheric solid analysis probe mass spectrometry has the capability of capturing full product patterns simultaneously including both volatile and semi‐volatile compounds produced at elevated temperatures. Real‐time low‐energy collision‐induced fragmentation combined with ion mobility separations enables rapid identification of the chemical structures of products. We present here for the first time the recognition of full product patterns resulting from the thermal degradation of β‐carotene at temperatures up to 600 °C. Solvent vapor‐induced ionization enhancement is observed, which reveals parallel thermal dissociation processes that lead to even‐ and odd‐numbered mass products. The drift‐time distributions of high mass products, along with β‐carotene, were monitored with temperature, showing multiple conformations that are associated with the presence of two β‐rings. Products of masses 346/347, however, show a single conformation distribution, which indicates the separation of two β‐rings resulting from the direct bond scission at the polyene hydrocarbon chain. The thermal degradation pathways are evaluated and discussed. Published 2016. This article is a U.S. Government work and is in the public domain in the USA.     

Hydrolytic degradation of poly(rac‐lactide) and poly[(rac‐lactide)‐co‐glycolide] at the air–water interface

The understanding of the simultaneous transport and chain‐scission phenomena involved in the hydrolysis of bulk‐degrading polymers requires the experimental separation of chain cleavage and water diffusion. The hydrolytic chain cleavage of poly(rac‐lactide) rac‐(PLA) and poly[(rac‐lactide)‐co‐glycolide] (PLGA) is analysed on the basis of monolayer degradation experiments combined with an improved data reduction procedure. Different, partly contradictory models of the hydrolytic degradation and erosion mechanism of PLA and PLGA, namely random chain scission and chain‐end scission, are discussed in the literature. The instantaneous linear area reduction observed for the polymer Langmuir films indicates a chain‐end scission mechanism. As monolayers of end‐capped and non‐end‐capped polymers degrade with exactly the same rate, the observed differences in the degradation kinetics of bulk samples do clearly result from differences in the water penetration into these polymers. A pronounced ‘auto‐inhibition’ effect is observed for the polymers degraded at initially high pH of the aqueous subphase in the absence of buffers. Copyright © 2007 John Wiley & Sons, Ltd.     

High‐resolution MALDI‐TOF MS study on analysis of low‐molecular‐weight products from photo‐oxidation of poly(3‐hexylthiophene)

High‐resolution matrix‐assisted laser desorption/ionization (MALDI) time‐of‐flight mass spectrometry (TOF MS) was used for the analysis of the low‐molecular‐weight products from the photo‐oxidation of poly(3‐hexylthiophene) (P3HT) in solution and thin film. Eight new peak series were observed in the low‐mass range of the mass spectra of the products degraded in solution, and the formulas of the eight components were determined from the accurate mass. From SEC/MALDI‐TOF MS, two components were identified as the degraded products, and the other six components were derived from the fragmentation of the degraded products during the MALDI process. A mechanism for the formation of these components was proposed on the basis of the results of MALDI‐TOF MS. For the thin film degradation, a part of products in the solution degradation were observed, which supports that the oxidation of P3HT in solution and thin film proceeded in the same mechanism. This study shows that high‐resolution MALDI‐TOF MS is effective for the analysis of the low‐molecular‐weight products from P3HT photo‐oxidation and expected to be feasible for the degradation analyses of other polymers. Copyright © 2015 John Wiley & Sons, Ltd.     

Product and mechanistic analysis of the reactivity of a C6-pyrimidine radical in RNA

Nucleobase radicals are the major reactive intermediates produced when hydroxyl radical reacts with nucleic acids. 5,6-Dihydrouridin-6-yl radical (1) was independently generated from a ketone precursor via Norrish Type I photocleavage in a dinucleotide, single-stranded, and double-stranded RNA. This radical is a model of the major hydroxyl radical adduct of uridine. Tandem lesions resulting from addition of the peroxyl radical derived from 1 to the 5'-adjacent nucleotide are observed by ESI-MS. Radical 1 produces direct strand breaks at the 5'-adjacent nucleotide and at the initial site of generation. The preference for cleavage at these two positions depends upon the secondary structure of the RNA and whether O(2) is present or not. Varying the identity of the 5'-adjacent nucleotide has little effect on strand scission. In general, strand scission is significantly more efficient under anaerobic conditions than when O(2) is present. Strand scission is more than twice as efficient in double-stranded RNA than in a single-stranded oligonucleotide under anaerobic conditions. Internucleotidyl strand scission occurs via β-fragmentation following C2'-hydrogen atom abstraction by 1. The subsequently formed olefin cation radical ultimately yields products containing 3'-phosphate or 3'-deoxy-2'-ketouridine termini. These end groups are proposed to result from competing deprotonation pathways. The dependence of strand scission efficiency from 1 on secondary structure under anaerobic conditions suggests that this reactivity may be useful for extracting additional RNA structural information from hydroxyl radical reactions.     

Products of the gas‐phase photooxidation reactions of 1‐propanol with OH radicals

An experimental investigation of the hydroxyl radical initiated gas‐phase photooxidation of 1‐propanol in the presence of NO was carried out in a reaction chamber using gas chromatography mass spectrometry. The products identified in the OH radical reactions of 1‐propanol were propionaldehyde and acetaldehyde, with corresponding formation yields of 0.719 ± 0.058 and 0.184 ± 0.030, respectively. Errors represent ±2σ. The experimental product yields were compared to predictions made using chemical mechanisms. © 1999 John Wiley & Sons, Inc. Int J Chem Kinet 31: 810–818, 1999     

Formation of Oxygen Radicals in Solutions of Different 7,8‐Dihydropterins: Quantitative Structure‐Activity Relationships

Under certain conditions, 7,8‐dihydroneopterin in aqueous solution promotes hydroxyl‐radical formation. Thus, we investigated the stimulation of hydroxyl‐radical formation by ten different 7,8‐dihydropterins (=2‐amino‐7,8‐dihydropteridin‐4(1H)‐one), i.e., 6‐(1′‐hydroxy) derivatives 1 and 2 , methyl derivatives 3 – 7 , and 6‐(1′‐oxo) derivatives 8 – 10 . All but the 6‐(1′‐oxo) derivatives produced hydroxyl radicals, as measured by the amount of salicylic acid hydroxylation products. This amount was dependent on the stability of the dihydropterin used. In the presence of chelated iron ions, hydroxylation was increased in every case; even 6‐(1′‐oxo) derivatives showed a low hydroxylation of salicylic acid. The degree of increase, however, strongly depended on the side chain of the dihydropterin. The 7,8‐dihydroneopterin ( 2 ) was investigated in more detail. Iron ions influenced both, the stability of 2 and hydroxyl‐radical formation. While iron ions determined the kinetics of the reaction, the amount of 2 was responsible for the amount of hydroxyl radicals formed. Our data establish that promotion of hydroxyl‐radical formation by 7,8‐dihydropterins depends on the oxidizability of the dihydropterins and on their iron‐chelating properties.     

Neutral and acidic products derived from hydroxyl radical‐induced oxidation of arabinotriose assessed by electrospray ionisation mass spectrometry

The oxidation of α‐(1 → 5)‐l ‐arabinotriose (Ara₃), an oligosaccharide structurally related to side chains of coffee arabinogalactans, was studied in reaction with hydroxyl radicals generated under conditions of Fenton reaction (Fe²⁺/H₂O₂). The acidic and neutral oxidation products were separated by ligand exchange/size‐exclusion chromatography, subsequently identified by electrospray ionisation mass spectrometry (ESI–MS) and structurally characterised by tandem MS (ESI–MS/MS). In acidic fraction were identified several oxidation products containing an acidic residue at the corresponding reducing end of Ara₃, namely arabinonic acid, and erythronic, glyceric and glycolic acids formed by oxidative scission of the furanose ring. In neutral fractions were identified derivatives containing keto, hydroxy and hydroperoxy moieties, as well as derivatives resulting from the ring scission at the reducing end of Ara₃. In both acidic and neutral fractions, beyond the trisaccharide derivatives, the corresponding di‐ and monosaccharide derivatives were identified indicating the occurrence of oxidative depolymerisation. The structural characterisation of these oxidation products by ESI–MS/MS allowed the differentiation of isobaric and isomeric species of acidic and neutral character. The species identified in this study may help in detection of roasting products associated with the free radical‐mediated oxidation of coffee arabinogalactans. Copyright © 2014 John Wiley & Sons, Ltd.     

Oxidatively Generated Damage to Cellular DNA by UVB and UVA Radiation,

This review article focuses on a critical survey of the main available information on the UVB and UVA oxidative reactions to cellular DNA as the result of direct interactions of UV photons, photosensitized pathways and biochemical responses including inflammation and bystander effects. UVA radiation appears to be much more efficient than UVB in inducing oxidatively generated damage to the bases and 2‐deoxyribose moieties of DNA in isolated cells and skin. The UVA‐induced generation of 8‐oxo‐7,8‐dihydroguanine is mostly rationalized in terms of selective guanine oxidation by singlet oxygen generated through type II photosensitization mechanism. In addition, hydroxyl radical whose formation may be accounted for by metal‐catalyzed Haber–Weiss reactions subsequent to the initial generation of superoxide anion radical contributes in a minor way to the DNA degradation. This leads to the formation of both oxidized purine and pyrimidine bases together with DNA single‐strand breaks at the exclusion, however, of direct double‐strand breaks. No evidence has been provided so far for the implication of delayed oxidative degradation pathways of cellular DNA. In that respect putative characteristic UVA‐induced DNA damage could include single and more complex lesions arising from one‐electron oxidation of the guanine base together with aldehyde adducts to amino‐substituted nucleobases.     

Design of Leaving Groups in Radical CC Fragmentations: Through‐Bond 2c–3e Interactions in Self‐Terminating Radical Cascades

Radical cascades terminated by β‐scission of exocyclic C?C bonds allow for the formation of aromatic products. Whereas β‐scission is common for weaker bonds, achieving this reactivity for carbon–carbon bonds requires careful design of radical leaving groups. It has now been found that the energetic penalty for breaking a strong σ‐bond can be compensated by the gain of aromaticity in the product and by the stabilizing two‐center, three‐electron “half‐bond” present in the radical fragment. Furthermore, through‐bond communication of a radical and a lone pair accelerates the fragmentation by selectively stabilizing the transition state. The stereoelectronic design of radical leaving groups leads to a new, convenient route to Sn‐functionalized aromatics.     

Reactivity of the 4,5‐Didehydroisoquinolinium Cation

The chemical properties of a 1,8‐didehydronaphthalene derivative, the 4,5‐didehydroisoquinolinium cation, were examined in the gas phase in a dual‐cell Fourier‐transform ion cyclotron resonance (FT‐ICR) mass spectrometer. This is an interesting biradical because it has two radical sites in close proximity, yet their coupling is very weak. In fact, the biradical is calculated to have approximately degenerate singlet and triplet states. This biradical was found to exclusively undergo radical reactions, as opposed to other related biradicals with nearby radical sites. The first bond formation occurs at the radical site in the 4‐position, followed by that in the 5‐position. The proximity of the radical sites leads to reactions that have not been observed for related mono‐ or biradicals. Interestingly, some ortho‐benzynes have been found to yield similar products. Since ortho‐benzynes do not react via radical mechanisms, these products must be especially favorable thermodynamically.     

Determination of primary bond scissions by mass spectrometric analysis of ultrasonic degradation products of poly(ethylene oxide‐block‐propylene oxide) copolymers

Ultrasonic degradation of poly(ethylene oxide‐block‐propylene oxide) copolymers consisting of a hydrophilic and a hydrophobic portion was studied with the aim to determine the location of bonds involved in the initial scission of the copolymers. LC–APCI‐IT‐MS and LC–APCI‐orbitrap‐MS were used for the detailed structural analysis of degradation products. The results indicated that initial bond scissions occurred principally at the boundary regions between backbones of polyethylene oxide (PEO) and polypropylene oxide (PPO) chains. Further structural analysis revealed the presence of oxygen adducts in the degradation products. Comparison with a thermal degradation carried out in helium atmosphere, one can conclude that the oxygen adducts are formed by radical reaction with water or dissolving oxygen molecules. The study demonstrated that chemical reactions as well as physical bond stress scissions are involved in the ultrasonic degradation of the copolymers. Copyright © 2010 John Wiley & Sons, Ltd.     

Degradation mechanism of poly(ether‐urethane) Estane® induced by high‐energy radiation. II. Oxidation effects

To predict long‐term polymer behavior during a nuclear waste storage time, radiation effects on a segmented aromatic poly(ether‐urethane) induced by high‐energy radiation under oxygen atmosphere were investigated. To obtain a predictive model of polymer radio‐oxidation during several centuries, the first step consists to elaborate the elementary degradation mechanisms. Thus, electron paramagnetic resonance (EPR), Fourier transform infra‐red spectroscopy (FT‐IR), electrospray ionisation‐mass spectrometry (ESI‐MS), and gas mass spectrometry were carried out to identify radicals, chemical modifications, and gases to reach the radio‐oxidative mechanism at doses inferior than 1000 kGy. Degradation mainly occurs at urethane bonds and in polyether soft segments that produces stable oxidative products as formates, alcohols, carboxylic acids and H₂, CO₂ and CO gases. Predominant degradation occurred at polyether soft segments and crosslinking is in competition with scission. On the basis of the results, a mechanism of degradation for aromatic poly(ether‐urethane) is proposed. © 2008 Wiley Periodicals, Inc. J Polym Sci Part B: Polym Phys 46: 861–878, 2008     

The role of air in the radiolytic degradation of polycarbonate

Bisphenol A polycarbonate (PC) was irradiated with Co-60 γ-rays at room temperature in presence of air or nitrogen. Changes were followed by IR and NMR spectroscopy as well as GPC, X-ray diffraction, melting temperature, DTA, and isothermal TG. The changes observed include chain scission, chain branching/cross-links, decrease in thermal stability, crystallinity and scission of the product. However, there are some differences in samples irradiated in presence of air as opposed to those irradiated in nitrogen, but many changes are similar. Air accelerates the radiolytic degradation of PC. The radiochemical yield of chain scission, G(s), increased to 0.20 from 0.13; the chain branching/cross-links are less numerous as compared to those after irradiation in nitrogen the thermal stability decreases along with the temperature of that rate of maximum mass loss, crystallinity and the melting temperature. The chemical products in both air and nitrogen irradiations are almost identical. The formation of these products could be explained by multiple pathways-free radical formation and by ring as well as side chain attack. The studies suggest that Fries' rearrangement is not an important pathway during the radiolytic degradation as compared with photodegradation.     

Application of LC‐MS and LC‐MS‐MS to the analysis of photo‐decomposed crystal violet in the investigation of cultural heritage materials aging

In this work, the accurate liquid chromatography‐ultraviolet‐visible (LC‐UV‐Vis), LC‐mass spectrometry (MS) and LC‐MS‐MS analysis of the photo‐degradation products of crystal violet (CV) is reported. CV is a light fugitive early synthetic dye which had a widespread diffusion into the market starting from the end of the XIX century and was used among others by V. Van Gogh and P. Gauguin in their writings, drawings or paintings. On‐line photodiode array detector enabled simultaneous UV‐Vis spectra acquisition. Many degradation compounds were identified through their exact mass (2 ppm accuracy) and MS‐MS technique. In particular, all CV demethylated products, demethylated Michler's ketone and particularly some compounds that most likely contain oxygen, such as N‐oxides, were found. Fragmentation products are all justified by the proposed fragmentation scheme, in term of precursor exact mass and isotopic profile, characteristic losses in fragmentation and rebuilt structure formula. In particular, we hypothesized the presence of N‐imido oxides and hydroxylamine derivates, never reported before, together with the demethylated derivatives of the studied dyes. All these compounds, although at trace level in our samples, contribute to the discoloration and fading of works of arts made with CV. In particular, demethylation of CV by UV light leads to formation of compounds absorbing at shorter wavelengths than CV (blue shift) or no‐absorbing in visible range (yellow‐colourless) with an overall effect that may appear reddish‐brown. This phenomenon justifies drawings appearing grey or brown on aged yellowed paper, when CV‐based inks or paints were used. The final aim was to better characterize the photo‐degradation of early synthetic dyes (in particular of CV) and to gain a better insight into the discoloration and fading of purple ink strokes made of CV. Copyright © 2012 John Wiley & Sons, Ltd.     

Studying the mechanism of thioketone‐mediated polymerization via electrospray ionization mass spectrometry

The polymeric product spectrum generated in thioketone‐mediated free radical polymerization (TKMP) was analyzed via electrospray ionization mass spectrometry. Poly(n‐butyl acrylate) samples were synthesized in the presence of the (commercially available) thioketone 4,4‐bis(dimethylamino)thiobenzophenone under variable reaction conditions in toluene solution at 80 °C. To unambiguously assign the mass spectra, the samples are prepared under variation of the monomer (going from n‐butyl acrylate to ethyl acrylate) as well as by employing variable thermally decomposing initiators [i.e., 2,2′‐azoisobutyronitrile and azobis(cyclohexanecarbonitrile)]. In all mass spectra, significant amounts of the expected cross‐termination product, formed via bimolecular termination of propagating macroradicals with the dormant thioketone radical adduct (consisting of a propagating chain and the mediating thioketone) alongside conventional termination products can be identified. As the study was carried out on acrylate polymers, acrylate‐specific reaction products arising from intramolecular transfer reactions followed by β‐scission of the generated mid‐chain radicals are also identified in the mass spectra. In addition, a species congruent with the dormant thioketone radical adduct itself (oxidized to its cationic state) was identified. Products that could potentially be formed via a chain transfer mechanism cannot be identified. The results presented here thus support the earlier suggested TKMP mechanism involving a highly stabilized adduct radical which undergoes significant cross‐termination reactions. © 2009 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 47: 1864–1876, 2009     

Anomalous electrophoretic migration of short oligodeoxynucleotides labelled with 5′‐terminal Cy5 dyes

By using a fluorescent exonuclease assay, we reported unusual electrophoretic mobility of 5′‐indocarbo‐cyanine 5 (5′‐Cy5) labelled DNA fragments in denaturing polyacrylamide gels. Incubation time and enzyme concentration were two parameters involved in the formation of 5′‐Cy5‐labelled degradation products, while the structure of the substrate was slightly interfering. Replacement of positively charged 5′‐Cy5‐labelled DNA oligonucleotides (DNA oligos) by electrically neutral 5′‐carboxyfluorescein (5′‐FAM) labelled DNA oligos abolished the anomalous migration pattern of degradation products. MS analysis demonstrated that anomalously migrating products were in fact 5′‐labelled DNA fragments ranging from 1 to 8 nucleotides. Longer 5′‐Cy5‐labelled DNA fragments migrated at the expected position. Altogether, these data highlighted, for the first time, the influence of the mass/charge ratio of 5′‐Cy5‐labelled DNA oligos on their electrophoretic mobility. Although obtained by performing 3′ to 5′ exonuclease assays with the family B DNA polymerase from Pyrococcus abyssi, these observations represent a major concern in DNA technology involving most DNA degrading enzymes.     

LC/MS study of the UV filter hexyl 2‐[4‐(diethylamino)‐2‐hydroxybenzoyl]‐benzoate (DHHB) aquatic chlorination with sodium hypochlorite

The fate of modern personal care products in the environment is becoming a matter of increasing concern because of the growing production and assortment of these compounds. More and more chemicals of this class are treated as emerging contaminants. Transformation of commercially available products in the environment may result in the formation of a wide array of their metabolites. Personal care products in swimming pools and in drinking water reservoirs may undergo oxidation or chlorination. There is much data on the formation of more toxic metabolites from original low toxicity commercial products. Therefore, reliable identification of all possible transformation products and a thorough study of their physicochemical and biological properties are of high priority. The present study deals with the identification of the products of the aquatic chlorination of the hexyl 2‐[4‐(diethylamino)‐2‐hydroxybenzoyl]‐benzoate ultraviolet filter. High‐performance liquid chromatography/mass spectrometry (HPLC/MS) and HPLC/MS/MS with accurate mass measurements were used for this purpose. As a result, three chlorinated transformation products were identified. Copyright © 2013 John Wiley & Sons, Ltd.