Intercalation of α,ω-Alkanediamines in Layered Aluminium Dihydrogen Triphosphate Dihydrate

Intercalation of ,-alkanediamines, NH₂(CH₂) _n NH₂ (n = 3–10), into layered aluminium dihydrogen triphosphate dihydrate, AlH₂(P₃(O₁₀... 2H₂O, was investigated by XRD, DTA-TG, elemental analysis, and solid-state ³¹P, ¹³C and ²⁷Al NMR. ,-Alkanediamines are intercalated to form a monomolecular layer in the interlayer region, in which the alkanediamines incline at 57 ± 5° to the phosphate layers, whereas n-alkylamines form a bilayer structure with the same inclination angle. Two amino groups in an ,-alkanediamine molecule bridge the layered sheets of phosphates.     

Molecular structures of benzoylbenzo-12-crown-4 and diphenylacetylbenzo-12-crown-4 and possible reasons for different conformational states of their macrocycles

The molecular structures of (benzoyl)benzo-12-crown-4 (a=22.387,b=4.503,c=16.167 Å,d _calc=1.34 g cm^–3,Z=4, space groupP2₁ nc, DAR-UM, Cu-K,R=0.056) and (diphenylacetyl)benzo-12-crown-4 (a=8.866,b=23.337,c=10.737 Å;d _calc=1.25 g cm^–3,Z=4, space groupP2₁2₁2₁, DAR-UM, Cu-K, R=0.056) have been investigated. The differences in the conformations of the macrocycles and the degree of conjugation between the benzene ring orbitals and the lone pairs on the adjacent oxygen atoms in the macrocycle are discussed.Translated fromIzvestiya Akademii Nauk. Seriya Khimicheskaya, No. 11, pp. 1906–1911, November, 1993.     

Structures and tautomeric interconversions of anthraquinone imine derivatives

Substituted 1-hydroxy-9,10-anthraquinone-9-imines have been found to exhibit tautomeric interconversions between the 9,10- and 1,10-quinonoid forms in the solid state as well as in solution. Single-crystal X-ray crystallography was used to study the structures of 4-(N-acetyl-p-tolylamino)-9-amino-1,10-anthracenedione and 4-hydroxy-1-phenylamino-10-mesitylimino-9(10H)-anthracenone at ambient and low temperatures. The former compound gave crystals belonging to the monoclinic space group P2_l/c and, at 295 K,a=9.684(2),b=16.371(3),c=12.097(2) å,=110.41(1), V=1797 å³,Z=4, R(F)=0.042, and GOF=0.863. The latter compound gave crystals belonging to the monoclinic space group C2/c and, at 295 K,a=38.158(8),b=6.322(2),c=19.325(4) å,=101.78(2),V=4564 å³,Z=8, R(F)=0.052, and GOF=0.981, while at 150 K,a=37.852(6),b=6.245(1),c=19.235(4) å,=102.81(1),V=4434 å³,R(F)=0.047, and GOF=1.006. Comparison of the geometric parameters of the two compounds illustrates the considerable zwitterionic nature of the first, a distinctive feature of which is a very short bond N(9)-C(9) whose length is essentially equal to that of a double bond. Molecular modeling studies using AMI semiempirical calculations were shown to be capable of satisfactorily reproducing the energetics of the tautomeric equilibrium once the medium effect was taken into account.     

Coordination chemistry of alkali and alkaline earth cations. Barium-crown encapsulation studies: The synthesis and crystal structure of barium(picrate)2(benzo-15-crown-5) monohydrate

The interaction of barium with benzo-15-crown-5 (B15C5) has been followed under the competitive effect of various chelating organic anions (L), nitrophenolates and nitrobenzoates, in ethanol and ethanol-water (9:1). The rather heavily hydrated BaL₂ salts yield novel 1:1 stoichiometric products in monohydrated or anhydrous states. Use of excess crown does not under any condition lead to the formation of 1:2 charge separated complexes, expected in view of the cavity and the cation sizes. The 1:1 Ba–B15C5 interaction is counteracted by L in accordance with its nucleophilicity, i.e., the pK _a value of its parent acid, HL. The complex Ba(picrate)₂(B15C5)·H₂O (BaC₂₆H₂₆N₆O₂₀, FW=879.0), is monoclinic,P2₁/c,a=11.43(1),b=16.31(3),c=17.38(2) Å, =92.265(3)°,Z=4,D _c=1.77 g/cm³,D ₀=1.73 g/cm³, MoK, =0.71069 Å, 2 (4.0–50°), =13.5 cm^–1,F(000)=1752,T=–32°C. FinalR for the 5926 reflections was 0.049. The structure reveals barium to be 10-coordinated through all the five crown oxygens (Ba–O, 2.800 to 3.002 Å), the two bidentate picrates (Ba–O, 2.642 and 2.666 Å; Ba–ONO, 2.825 and 2.994 Å), and the water molecule (2.711 Å) so that the cation constitutes a pseudo-sandwich of the crown on one side and the anionic species on the other. Supplementary Data relating to this article are deposited with the British Library as Supplementary Publication No. SUP 82007 (50 pages). To obtain copies, see page ii of this issue.     

An X-ray study of the complex anionbis(N-hydroxy-iminodiacetate) vanadate(IV), a model for a vanadium-containing biologic compound

The structure of ammonium tetramethylammoniumbis(N-hydroxy-iminodiacetate)vanadate(IV) was determined by x-ray analysis. One independent anion and two cations were found in the asymetric unit. The crystal is monoclinic, space group C2/c, with a=15.820(9), b=16.450(6), c=16.311(4) å,=118.92(3) deg., V=3715(3) å³, Z=8, D_x=1.56g cm^–3,(M_o-K_a)=5.59 cm^–1, F(OOO)=2028, M=434.9 for C₁₂H₂₄N₄O₁₀V. The structure was solved and refined to R(F)=0.029 and R_w(F)=0.040.The complex anion does not contain the oxovanadium(IV) group, but contains vanadium(IV) as the central atom. This is the first example of a vanadium(IV) complex octacoordinated to nitrogen and oxygen atoms exhibiting a highly distorted dodecahedral geometry. The chelation is along twoa and fourg edges. As the angles ones are bonding distances (N—O, 1.381(3), 1.382(4) å) the angles around the central atom are very different from those usually observed in the dodecahedral complexes. The V—O distances range from 1.973(3) to 2.071(3) å and the V—N distances range from 2.002(3) to 2.003(4) å.     

Modeling chemoadaptive behavior: X-ray structure of the trimethylamine oxide-urea (1∶4) complex

The structure of a trimethylamine oxide (TMAO)-urea 14 complex was investigated by x-ray crystallographic methods. C₃H₉NO, 4CH₄N₂O, M_r=315.33, monoclinic P2₁/n, a=11.004(2), b=9.8259, c=15.419(2),=106.88(4), V=1595.4(2) å₃, Z=4, D_x=1.313(1) g cm^–3, monochromatized Cu (=1.5418 å),=8.94 cm^–1, F(OOO)=680, temperature = 110K, final R=0.067, for 1786 unique observed reflections. Based on these studies and comparison with related compounds a model of the interaction of urea and TMAO with proteins, especially enzymes, is proposed. This is important in the physiology of many organisms, especially elasmobranchs. The counteracting effect of TMAO on urea perturbation of protein structure and function is interpreted in terms of water structure as a balance between the structure breaking effect of urea and the structure-stabilizing effect of TMAO.     

Coordination chemistry of alkali and alkaline earth cations. X-ray structural analysis of bis (benzo-15-crown-5) potassium nitrate monohydrate

The 1:2 charge separated KNO₃ complex with benzo-15-crown-5 (B15C5) has been crystallized from a 50% water-methanol solution. K(B15C5)₂NO₃·H₂O is monoclinic,P2₁/c,a=12.717(2),b=19.569(2),c=13.025(3) Å, =100.79(1)^o,Z=4,D _c =1.37 g·cm^–3. The X-ray structure was refined toR=0.052 for 3049 independent reflections withF ₀ ² 2.0(F ₀ ² ), collected with MoK radiation for a 2 -range of 4–44°. The K⁺ ion is coordinated tenfold in a crown sandwich through all five oxygen atoms of the macrocyclic ligand. Nitrate and water oxygens are not involved in the cation coordination sphere. Supplementary Data relating to this article are deposited with the British Library as Supplementary Publication No. SUP 82031 (6 pages).     

Two clathrates of bis(isothiocyanato)tetrakis(4-methylpyridine)magnesium(II) as a host with 4-methylpyridine as a guest

Two clathrate modifications of the title host with 4-methylpyridine (4-CH₃C₅H₄N) as a guest have been determined at –50°C. [Mg(4-CH₃C₅H₄N)₄(NCS)₂] · 2/3(4-CH₃C₅H₄N) · 1/3H₂O is trigonal, space group , witha=27.630(7),c=11.219(3) ÅV=7417(4) ų,Z=9,D _calc=1.171 g cm^–3,(CuK )=18.506 cm^–1, finalR=0.064. [Mg(4-CH₃C₅H₄N)₄(NCS)₂] · (4-CH₃C₅H₄N) is tetragonal, space group I4_l/a, witha=16.944(7),c=23.552(9)Å,V=6762(5) Å,Z=8,D _calc=1.191 g cm^–3, (CuK )=18.200 cm^–1, finalR=0.071.The structures consist of molecular packings of the same host complex units and the guest species. The Mg(II) cation is octahedrally coordinated to theN-atoms of four 4-methylpyridine and twotrans-coordinated isothiocyanato ligands in the host molecule. The conformations of the molecule are considerably different both in symmetry and in geometry in these two structures. The guest 4-methylpyridine molecules are disordered into channels which have different topology in these two clathrates resulting in different thermal stability.     

Relativistic perturbation theory of molecular structure

Summary The recently developed relativistic double perturbation theory is extended to handle relativistic changes of molecular structure more easily. This is achieved by simple coordinate scalings. Accurate higher order mixed perturbation energies for H ₂ ⁺ are calculated. The relativistic changes of bond energy,DE, of bond length,R _e , and especially of force constant,k, and of anharmonicity,a, are large, up to 100%·(Z/c)². The dominant contributions tok anda are due to the indirect change of the nonrelativistick anda connected with the relativistic change of bond length. Accordingly the relativistic changes obey Badger's and Gordy's rules (–RDEk).Dedicated to Prof. Klaus Ruedenberg in appreciation of his fundamental contributions to both formal theory and physical explanations in quantum chemistry     

Coordination chemistry of alkali and alkaline earth cations: Crystal structure of rubidium (benzo-15-crown-5)2NO3·H2O

The complex Rb(B15C5)₂NO₃·H₂O is monoclinic,P2_1/c,a=12.695(3),b=19.471(3),c=12.991(2)Å, =99.60(2)^o,V=3166 ų,D _c =1.473 g/cm³ (163 K),D _c =1.434 g/cm³ (298 K),D _o =1.44 g/cm³ (298 K),T=163K,Z=4, MoK=0.71069 Å, 2(4^o–53^o), =16.43 cm^–1,F(000)=1424. FinalR for the 4588 observed reflections (F>3) is 0.062. All ten oxygens of the two benzo-crowns are shown to coordinate to the rubidium ion (Rb...O,2.92 to 3.07 Å) forming a charge-separated sandwich. The nearest nitrate oxygen is displaced 6.51 Å from the rubidium ion and is hydrogen bonded to a water molecule. Supplementary Data relating to this article are deposited with the British Library as Supplementary Publication No. SUP 82028 (28 pages)     

The molecular complex of dibenz[a,c]anthracene and trinitrobenzene

The crystal structure of the complex between the polycyclic aromatic hydrocarbon di-benz[a,c]anthracene and 1,3,5-trinitrobenzene is reported. The crystals are triclinic, space group P¯1 with unit cell dimensionsa=7.277(2) å,b=11.237(6) å, andc=13.902(5) å,= 104.13(4),=96.04(3), and =95.15(2). Diffraction data were measured at 121(2) K. The structure was determined and refined toR ₁=0.046. The structure consists of layers containing both dibenz[a,c]anthracene and 1,3,5-trinitrobenzene molecules, interconnected within a layer by C-H O interactions. Layers stack on one another so that dibenz[a,c]anthracene molecules are sandwiched between 1,3,5-trinitrobenzene molecules and vice versa. The average distance between molecules in these sandwiches is 3.23 å.     

Solid state structure of the hydrated potassium thiocyanate complex of benzodinaphthopyridino 21-crown-7, C37H31NO6·KSCN·H2O (1 : 1 : 1)

Single crystal X-ray analysis of the hydrated KSCN complex of benzodinaphthopyridino-21-crown-7 (1) (1 : 1 : 1) is reported. Crystals of the complex are orthorhombic,Pnma, with = 16.946(4),b = 22.298(4),c = 10.390(8) Å andD _c = 1.184 g cm^–1,Z = 4. The host macroring (1) has a mirror symmetry and exists in a so-called dentists chair conformation. The cation (K^–) is coordinated to all the six ether oxygen atoms and also weakly to the pyridine N atom. The SCN^– anion group has a statistical type of disorder with opposite orientations of S and N such that nitrogen and sulphur are coordinated to K⁺. Packing of the host molecules is in columns to form quasi channels with K⁺, SCN^–, and H₂O being located inside the stacks. Supplementary Data relating to this article are deposited with the British Library as Supplementary Publication No. SUP 82132 (9 pages).     

Macrocycle complexation chemistry. 38. Crystallographic and ultraviolet/visible characterization of nitrobenzo-15-crown-5, dinitrobenzo-15-crown-5, and dinitrodibenzo-18-crown-6·2CH3CN

The crystal structures of three nitrated benzocrown ethers have been determined. Nitrobenzo-15-crown-5 crystallizes in the orthorhombic space group,Pca2₁, witha = 15.367(2),b = 4.8499(8),c = 19.963(5)Å, andD _calc = 1.40 g cm^–3 forZ = 4. Dinitrobenzo-15-crown-5 crystallizes in the monoclinic space group,P2₁/n, witha = 11.716(2),b = 8.495(3),c = 17.441(5)Å, = 108.40(2)° andD _calc = 1.44 g cm^–3 forZ = 4.Dinitrodibenzo-18-crown-6·2CH₃CN ismonoclinic,P2₁/n,witha = 8.138(2),b = 20.435(9),c = 15.953(9)Å, = 100.55(4)° andD _calc = 1.36 g cm^–3 forZ = 4. The nitro substituents are in the plane of the benzo ring except in the sterically congested dinitrobenzo-15crown-5. The observed crown ether conformations are similar to their substituted analogs.For part 37, see reference [1].     

The structure of the uncharged-molecule complex between a dinaphthopyridino-18-crown-6 host and acetonitrile (1 : 2)

Single crystal X-ray analysis of a 1 : 2 complex between the dinaphthopyridino-l8-crown-6 host (1) and acetonitrile is reported. Crystals of the complex are monoclinic,P2₁/c witha = 12.178(5),b = 8.186(1),c = 30.873(1) Å, = 96.86(1)°, andD _c = 1.25 g cm^–3 forZ = 4. The host molecule reveals an approximate mirror symmetry and exists in a so-called dentist's chair conformation. One of the acetonitrile guest molecules is involved in possible weak interactions to two oxygen atoms of the host macroring, while the other fills free lattice space only.     

19F,31P,1H NMR and X-ray crystallographic studies of (pentafluorophenyl)3−n (4-pyrazol-1-yl-2,3,5,6-tetrafluorophenyl) n=1,2,3 Phosphines

New phosphines1–3 have been synthetized by reaction of pyrazolate anion with tris(pentafluorophenyl)phosphine and characterized by¹H,³¹P, and¹⁹F NMR studies.¹⁹F NMR spectral data contribute to the evidence for apara-substitution of tetrafluorophenyl rings. The crystal structure of tris(4-pyrazol-1-yl-2,3,5,6-tetrafluorophenyl)phosphine 1 has been determined, proving that the assignment based on spectroscopic data was correct: C₂₇H₉F₁₂N₆P,M _r = 676.37, monoclinic, space group P2_l/c,a=10.754(2) å,b=10.316(2) å,c = 23.598(5) å,=95.36(3),V=2607(1), å³,Z=4,R ₁=0.042, andwR ₂=0.122.     

Hydrogenation of the silanone groups (≡Si-O)2Si=0. Experimental and quantum-chemical studies

The reactivity of bis(siloxy)silanone groups (Si-0)₂Si=O stabilized on a silica surface with respect to H₂ molecules was studied. The reaction was found to give the (Si-O)₂SiH(OH) groups. The rate constant for this process was determined. Its activation energy in the 300–580 K temperature range is 13.4±0.3 kcal mol^–1, and the enthalpy is 54±5 kcal mol^–1. The activation energy for the reverse reaction,viz., elimination of a hydrogen molecule, is equal to 65 kcal mol^–1. Quantum-chemical calculations of hydrogenation of F₂Si=O and (HO)₂Si=O, which are the simplest molecular models of the silanone groups, were performed. Data on the geometrical and electronic structures of transition states and on the effects of substituents at the silicon atom on the reactivity of the silanone groups in this process were obtained. The optical absorption band of the surface silanone groups was quantitatively characterized. Its maximum is located at 5.65±0.1 eV; the extinction coefficient at the maximum (220 nm) is (3±0.5) · 10^–18 cm² molec.^–1.Translated fromIzvestiya Akademii Nauk. Seriya Khimicheskaya, No. 8, pp. 1951–1958, August, 1996.     

Inclusion complexes of the natural product gossypol. Crystal structures of gossypol complexes with benzene and chloroform as guests

The crystal structures of the lattice inclusion complexes of gossypol with benzene and chloroform have been determined by X-ray structure analysis. The crystals of (C₃₀H₃₀O₈)₂ · C₆H₆ (GPBNZ) are triclinic, space groupPI,a = 11.241(3),b = 14.986(4),c = 17.380(4) Å, = 98.89(2), = 99.86(2), = 98.91(2)°,V = 2800(2) ų,Z = 2,D _x = 1.32 g cm^–3, (CuK ) = 7.35 cm^–1. The structure has been refined to a finalR value of 0.050 for 6146 observed reflections. The crystals of C₃₀H₃₀O₈·CHCl₃ (GPCLF) are monoclinic, space groupC2/c,a = 28.464(4),b = 8.948(1),c = 26.480(4) Å, = 108.93(2)°,V = 6380(2) ų,Z = 8,D _x = 1.33 g cm^–3, (CuK) = 30.42 cm^–1. The structure has been refined to a finalR value of 0.100 for 1980 observed reflections.GPCLF forms an intercalate-type structure and GPBNZ a clathrate-type structure. There are, however, some similarities in the packing mode of the host molecules in these two structures. On a basis of comparison of the crystal packing of GPCLF and GPBNZ one can postulate that in the desorption process of the intercalate-type GPCLF complex an intermediate clathrate structure of the GPBNZ-type should be formed.     

Preparation and X-Ray crystal structure of a Novel Nickel(II) complex with dithiocarbimate

The reaction of potassiumN-(methanesulfonyl)-dithiocarbimate, K₂[S₂C=NSO₂CH₃], with nickel(II) chloride hexahydrate, NiCl₂·6H₂O, formed the complex anion bis(N-(methanesulfonyl)-dithiocarbimate)nickelate(II), [Ni(S₂C=NSO₂CH₃)₂]^2}-, which was isolated as its tetra-n-butylammonium salt. The UV-Vis data obtained were consistent with the formation of a nickelsulfur diamagnetic planar complex. The¹H NMR and the¹³C NMR spectra showed the expected signals for then-Bu₄N⁺ cation and the dithiocarbimate moiety. The single-crystal structure analysis showed that tetra-n-butylammonium bis(N-(methanesulfonyl)-dithiocarbimate)nickelate(II), (Bu₄N)₂[Ni(S₂C=NSO₂CH₃)₂], crystallizes in the monoclinic space groupP2_l/c witha=9.3197(5),b=15.0795(8),c=17.5286(9) å,=91.262(3),V=2462.8(3) å³, andZ=2. The nickel atom is coordinated to four sulfur atoms.     

Energetics of the oxidative addition of I2 to [Ir(Μ-L)(CO)2]2 (L=S t Bu, 3,5-Me2pz,7-aza) complexes. X-ray structures of Ir(Μ-S t Bu)(I)(CO)2]2 and [Ir(Μ-3,5-Me2pz)(I)(CO)2]2

The energetics of the oxidative additive of I₂ to [Ir(-L)(CO)₂]₂ [L =t-buthylthiolate (S ^t Bu), 3,5-dimethylpyrazolate (3,5-Me₂pz), and 7-azaindolate (7-aza)] complexes was investigated by using the results of reaction-solution calorimetric measurements, X-ray structure determinations, and extended Hückel (EH) molecular orbital calculations. The addition of 1 mol of iodine to 1 mol of [Ir(-L)(CO)₂]₂, in toluene, leads to [Ir(-L)(I)(CO)₂]₂, with the formation of two Ir-I bonds and one Ir-Ir bond. The following enthalpies of reaction were obtained for this process: –125.8±4.9 kJ mol^–1 (L = S ^t Bu), –152.0±3.8 kJ mol^–1 (L=3,5-Me₂pz), and –205.9±9.9 kJ mol^⊃ (L=7-aza). These results are consistent with a possible decrease of the strain associated with the formation of three-, four-, and five-membered rings, respectively, in the corresponding products, as suggested by the results of EH calculations. The calculations also indicate a slightly stronger Ir-Ir bond for L = 3,5-Me₂pz than for L= S ^t Bu despite the fact that the Ir-Ir bond lengths are identical for both complexes. The reaction of 1 mol of [Ir(-S ^t Bu)(CO)₂]₂ with 2 mol of iodine to yield [Ir(-S ^t Bu)(I)₂(CO)₂]₂ was also studied. In this process four Ir-I bonds are formed, and from the corresponding enthalpy of reaction (–186.4±2.7 kJ mol^–1) a solution phase Ir-I mean bond dissociation enthalpy in [Ir(-S ^t Bu)(I)₂(CO)₂]₂, , was derived. This value is lower than most values reported for octahedral mononuclear Ir¹¹¹ complexes. New large-scale syntheses of the [Ir(-L)(CO)₂]₂ complexes, with yields up to 90%, using [Ir(acac)(CO)₂] as starting material, are also reported. The X-ray structures of [Ir(-L)(I)(CO)₂]₂ (L=S^tBu and 3,5-Me₂pz) complexes have been determined. For L=S^tBu the crystals are monoclinic, space group P2_l/c,a=10.741(2) å,b= 11.282(3) å,c=18.308(3) å,=96.71(1), andZ=4. Crystals of the-3,5-Me₂pz derivative are monoclinic, space group P2_l/n,a=14.002(3) å,b= 10.686(1) å,c=15.627(3) å,=112.406(8), andZ=4. In both complexes the overall structure can be described as two square-planar pyramids, one around each iridium atom, with the iodine atoms in the apical positions, and the equatorial positions occupied by two CO groups and the two sulfur atoms of the S ^t Bu ligands, or two N atoms of the pyrazolyl ligands. In the case of L=S^tBu the pyramids share a common edge defined by the two bridging sulfur atoms and for L =3,5-Me₂pz they are connected through the two N-N bonds of the pyrazolyl ligands. The complexes exhibit short Ir-Ir single bonds of 2.638(1) å for L=S^tBu and 2.637(1) å for L=3,5-Me₂Pz. The oxidative addition of iodine to [Ir(-3,5-Me₂pz)(CO)₂]₂ results in a remarkable compression of 0.608 å in the Ir-Ir separation.     

The Crystal Structures of Rubidium and 4-Amino-1,2,4-Triazolium Tetrafluoroantimonates(III)

The crystal structures of complex antimony(III) fluorides RbSbF₄ (I) and (C₂N₄H₅)SbF₄ (II) were determined. The crystals of I and II are monoclinic; for I: a = 4.628(1) Å, b = 6.167(1) Å, c = 7.922(1) Å, = 100.582(3)°, V = 222.24(7) ų, Z = 2, (calcd.) = 4.23 g/cm³, (exp.) = 4.25 g/cm³, F(000) = 248, space group P2₁/m, R = 0.0395; for II: a = 4.678(1) Å, b = 7.339(4) Å, c = 10.185(1) Å, = 90.88(2)°, V = 349.6(2) ų, Z = 2, (calcd.) = 2.69 g/cm³, (exp.) = 2.70 g/cm³, F(000) = 264, space group P2₁. The structure of I is formed by Rb⁺ cations and [SbF₄] ^n– _n anionic chains composed of SbF₅E octahedra with two bridging fluorine atoms. The structure of IIis formed by (C₂N₄H₅)⁺ cations and isolated [SbF₄]^– anions in which the antimony polyhedra are SbF₄E trigonal bipyramids. The relationship between the crystal structures and electrophysical and biological properties of single-charged cation tetrafluoroantimonates(III) was studied.