Complexes of TETROL with selected heterocyclics: unconventional host–guest hydrogen bonding and the correlation with host selectivity

Here we investigate and compare the more salient characteristics of host–guest complexes of (+)-(2R,3R)-1,1-4,4-tetraphenylbutane-1,2,3,4-tetraol (TETROL) with four heterocyclic guests, morpholine, piperidine, pyridine and dioxane. These guests each formed inclusion compounds with TETROL, and host:guest ratios were either 1:2 or 1:1. Single crystal diffraction experiments revealed unprecedented host behaviour in the presence of both piperidine and dioxane with respect to the mode of host–guest hydrogen bonding employed. Furthermore, by utilizing ¹H-NMR spectroscopy or gas chromatography (as applicable) as methods for analysing complexes obtained from competition experiments, we were able to identify the host selectivity order, and were gratified to discover that this order correlated precisely with host–guest hydrogen bond distance.     

Host behaviour of related compounds,TETROL and DMT,in the presence of two different classes of aromatic guest compounds

The host potential of two closely-related compounds, TETROL [(+)-(2R,3R)-1,1–4,4-tetraphenylbutane-1,2,3,4-tetraol] and DMT [(−)-(2R,3R)-2,3-dimethoxy-1,1,4,4-tetraphenylbutane-1,4-diol], were compared when recrystallized from two different classes of guests, namely toluene, ethylbenzene, cumene and aniline, N-methylaniline, N,N-dimethylaniline. TETROL formed complexes with only aniline and N-methylaniline (host:guest ratios, 2:3 and 2:4), while DMT included all six guests with a consistent ratio (2:1). Aniline competition experiments showed that TETROL preferred aniline (67%), followed by N-methyl- (29%) and N,N-dimethyl- (4%) aniline; surprisingly, this order was exactly reversed for DMT [N,N-dimethylaniline (62%) > N-methylaniline (32%) > aniline (6%)]. Crystal diffraction analyses revealed that TETROL formed stabilizing hydrogen bonds with guests, behaving as both donor and, for the first time, acceptor (in 2TETROL∙4N-methylaniline). DMT did not form bonds of this type with any guests. Furthermore, the host packing was isostructural for all DMT complexes but was guest-dependent for TETROL. Thermal analyses showed that complex stabilities correlated precisely with the host preferences.     

Synthesis, structural characterization and conformational aspects of nostoclide analogues

The synthesis and structural analysis of a set of nostoclide analogues with potential herbicide activity is described. The influence of intra- and intermolecular hydrogen bonding, as well as other interactions on the conformation and packing of the compounds is thoroughly described using DFT calculations and single crystal X-ray diffraction analyses. All lactones exhibited the Z configuration as confirmed by NOESY experiments and by single crystal X-ray diffraction measurements.     

Host compounds (+)-(2R,3R)-1,1,4,4-tetraphenylbutane-1,2,3,4-tetraol (TETROL) and (2R,3R)-(−)-2,3-dimethoxy-1,1,4,4-tetraphenylbutane-1,4-diol (DMT) with guests o-, m- and p- toluidine: A comparative investigation

In this work, we have compared the host abilities of closely related compounds (+)-(2R,3R)-1,1,4,4-tetraphenylbutane-1,2,3,4-tetraol (TETROL) and (2R,3R)-(?)-2,3-dimethoxy-1,1,4,4-tetraphenylbutane-1,4-diol (DMT) when these were recrystallized from single and mixed toluidine guests. Significant differences in host behaviour and selectivities were revealed and these were explained by means of single crystal diffraction experiments. Thermal analyses were used to determine the relative complex stabilities, and these data correlated exactly with the host selectivity orders for both TETROL and DMT.     

Asymmetric syntheses of dihydroxyhomoprolines via doubly diastereoselective lithium amide conjugate addition reactions

The asymmetric syntheses of novel dihydroxyhomoprolines have been achieved using the doubly diastereoselective conjugate additions of the antipodes of lithium N-benzyl-N-(α-methylbenzyl)amide to a set of four chiral α,β-unsaturated esters (derived from d-pentoses) as one of the key steps. A full account of the diastereoselectivity observed in these conjugate additions is presented and the stereochemical outcomes of these reactions have been established unambiguously via a combination of hydrogenolytic chemical correlation and single crystal X-ray diffraction analyses. A tandem hydrogenolysis/intramolecular reductive amination reaction was then used to create the corresponding enantiopure pyrrolidines, providing access to (2′S,3′S,4′R)-dihydroxyhomoproline and (2′S,3′R,4′S)-dihydroxyhomoproline after deprotection.     

Crystal and Molecular Structure of (4′<Emphasis Type="Italic">R</Emphasis>,5′<Emphasis Type="Italic">R</Emphasis>,22<Emphasis Type="Italic">R</Emphasis>)-22-Hydroxy-22-(3′,4′-dimethylisoxazolin-5′-yl)-6β-methoxy-3α,5-cyclo-23,24-dinorcholane

The crystal and molecular structure of (4′R,5′R,22R)-22-hydroxy-22-(3′, 4′-dimethylisoxazolin-5′-yl)-6β-methoxy-3α,5-cyclo-23,24-dinorcholane was studied by single crystal X-ray diffraction. The compound crystallizes in the monoclinic system, space group C2; a 19.649(7), b 7.680(2), c 17.254(6) Å; β 101.05(3)°. The only diastereomer formed by the 1,3-dipolar cycloaddition of acetonitriole oxide has the 4′R,5′R stereochemistry of the arising chiral centers. The conformation of the side chain of the molecule is additionally stabilized by an intramolecular hydrogen bond.     

Synthesis of hexahydrochromeno[4,3-b]azepine derivatives

Synthesis of optically pure (6aR,11aS)-7,8,9,10,11,11a-hexahydro-5-oxa-11-azacyclohepta[a]naphthalen-6a-ylamine from 2-cyano-6-oxazolopiperidine is described via the CN(R,S) strategy. The lithium aluminium hydride involves a one-pot reduction and a ring-enlargement process. Absolute configuration of the tricyclic derivative is unambiguously established by X-ray crystal structure analyses.     

Synthesis, characterization and thermal properties of small R2R2NX-type quaternary ammonium halides

Twenty-one R₂R^′₂N⁺X⁻ -type (R=methyl or ethyl, R^′=alkyl, X=Br or I) quaternary ammonium (QA) halides have been prepared by using a novel one-pot synthetic route in which a formamide (dimethyl-, diethylformamide, etc.) is treated with alkyl halide in the presence of sodium or potassium carbonate. The formation of QA halides was verified with ¹H-NMR, ¹³C-NMR, MS and elemental analysis. The crystal structures of four QA halides (two bromide and two iodide) were determined using X-ray single crystal diffraction, and the powder diffraction method was used to study the structural similarities between the single crystal and microcrystalline bulk material. The thermal properties of all compounds were studied using TG/DTA and DSC methods. The smallest compounds decomposed during or before melting. The decreasing trend of melting points was observed when the alkyl chain length was increased. The liquid ranges of 120-180 °C were observed for compounds with 5-6 carbon atoms in the alkyl chain. The low melting points and wide liquid ranges suggest potential applicability of these compounds for example as ionic liquids precursors.     

Inclusion of Poly(ethylene glycol)s by Crystalline (R)-(1-Naphthyl)glycyl-(R)-phenylglycine

Abstract

Crystallization of (R)-(1-naphthyl)glycyl-(R)-phenyl-glycine [(R,R)-1] in the presence of oligo(ethylene glycol) dimethyl ethers 2(n) or poly(ethylene glycol)s (PEGs, 3(M_n )) afforded inclusion compounds. The ratio of (R,R)-1/the guest polymer (2 or 3) was proportional to the length of the polymer chain. The crystal structure of a hepta(ethylene glycol) dimethyl ether-included compound was disclosed by X-ray crystallography which showed that (R,R)-1 molecules form a sheet and the guest molecule penetrates the crystal lattice of (R,R)-1 through a one-dimensional channel on the sheet. Powder X-ray analysis revealed that, regardless of the length of the guest polymer, the distance between the neighboring sheets remains unchanged (12.0–12.3 Å) in these inclusion crystals. By thermal analysis, it was shown that the decomposition points of these inclusion compounds became higher with the longer PEG included. The inclusion phenomenon enabled the fractionation of PEGs with various molecular weights, among which longer PEG was preferably included.     

Synthesis and crystal structure of 1D polyoxometalate-based composite compound, [{Gd(NMP)6}(PMo12O40)]n (NMP=N-methyl-2-pyrrolidone)

A novel compound, [{Gd(NMP)₆}(PMo₁₂O₄₀)]_n, has been synthesized and characterized by IR, and UV spectroscopy, and single crystal X-ray structural analysis. It forms an unprecedented one-dimensional zigzag chain built from alternating polyanions and cationic units through Mo-O_t-Gd-O_t-Mo links in the crystal. In the compound, Gd³⁺ is eight-coordinated with a bicapped trigonal prism geometry environment of oxygen atoms. The results of the single crystal X-ray diffraction analyses and IR are agreement and both show the metal cation units are coordinately bonded to the Keggin cluster. The UV spectrum of the title compound suggests that the compound is entirely dissociated in dilute solution.     

Synthesis and structural study of N′-(4,6-diphenylpyrimidin-2-yl)-2-methylpropanoic hydrazide

Reaction of 1-(4-methoxyphenyl)-3-isopropyl-5-(4,6-diphenylpyrimidin-2-yl)formazan with nickel nitrate in acid medium yields N′-(4,6-diphenylpyrimidin-2-yl)-2-methylpropanoic hydrazide. Its crystal and molecular structure is studied by single crystal X-ray diffraction.     

Crystal and molecular structure of methyl(±)-2-((1R,3R)-3-{ 2-[(3S)-1-ethyl-3-hydroxy-2-oxo-2,3-dihydro-1H-3-indolyl]acetyl}-2,2-dimethylcyclobutyl) acetate

The structure of methyl (±)-2-((1R,3R)-3-{ 2-[(3S)-1-ethyl-3-hydroxy-2-oxo-2,3-dihydro-1H-3-indolyl]acetyl}-2,2-dimethylcyclobutyl) acetate has been determined by single crystal X-ray diffraction. The crystal belongs to triclinic system; parameters of the unit cell are: a = 6.551(1) Å, b = 11.506(1) Å, c = 14.334(1) Å, α = 101.41(1)°, β = 97.57(1)°, γ = 104.72(1)°; space group P-1, Z = 2, composition C₂₁H₂₇NO₅. The structure of N-ethyloxindole fragment is usual for the present class of compounds. The configuration of the formed asymmetric carbon atom C(3) of the pyrrole ring along with the configuration of C(12) and C(14) atoms of 2,2-dimethylcyclobutane ring form the side chain of the molecule were determined. There is observed the generation of centrosymmetrical dimers in the crystal structure due to realized intermolecular hydrogen bond of O-H...O type, 2.808(2) Å.     

Synthesis, characterization and thermal properties of new aromatic quaternary ammonium bromides: precursors for ionic liquids and complexation studies

Series of new aromatic R₂R′₂N⁺Br⁻ (R=benzyl, 4-methylbenzyl, 2-phenylethyl, 3-phenylpropyl; R′=ethyl, methyl, isopropyl) or RR′₂NH⁺Br⁻-type (R=benzyl, R′=isopropyl) quaternary ammonium bromides were prepared by using novel synthetic route in which a formamide (N,N-diethylformamide, N,N-dimethylformamide, N,N-diisopropylformamide) is treated with aralkyl halide in presence of a weak base. The compounds were characterized by ¹H-NMR and ¹³C-NMR spectroscopy and mass spectrometry. Structures of the crystalline compounds were determined by X-ray single crystal diffraction, and in addition the powder diffraction method was used to study the structural similarities between the single crystal and microcrystalline bulk material. Three of the compounds crystallized in monoclinic, two in orthorhombic and one in triclinic crystal system, showing ion pairs, which are interconnected by weak hydrogen bonds and weak π-π interactions between the phenyl rings. Three of the compounds appeared as viscous oil or waxes. Finally, TG/DTA and DSC methods were used to analyze thermal properties of the prepared compounds. The lowest melting points were obtained for diethyldi-(2-phenylethyl)ammonium bromide (122.2 °C) and for diethyldi-(3-phenylpropyl)-ammonium bromide (109.1 °C). In general, decomposition of the compounds started at 170-190 °C without identifiable cleavages, thus liquid ranges of 30-70 °C were observed for some of the compounds.     

Tautomerism of aza cycles: I. Structure of 3(5)-butylsulfanyl-5(3)-methyl(phenyl)-1H-1,2,4-triazole tautomers in crystal. Preference of the 3-RA-5-RD-1H-tautomer of 3(5)-mono-and 3,5-disubstituted 1,2,4-triazoles

The X-ray diffraction study of potentially tautomeric 3(5)-butylsulfanyl-5(3)-methyl-1H-1,2,4-triazole and its 5(3)-phenyl-substituted analog showed that these compounds in crystal have the structure of 3-butylsulfanyl-5-methyl(phenyl)-1H-tautomers. Analysis of our experimental and published data indicated that 3(5)-monosubstituted 1,2,4-triazoles and 3,5-disubstituted derivatives having nonequivalent substituents in crystal as exist as a tautomer in which the electron-acceptor substituent (R_A) occupies the 3 position, while the electron-donor substituent (R_D) resides in the 5 position, i.e., as 3-R_A-5-R_D-1H-1,2,4-triazoles. Symmetric 3,5-disubstituted 1,2,4-triazoles could give rise to tautomeric equilibrium between the 1H-and 2H-structures even in crystal.     

对称四甲基六元瓜环与2-氨基甲基吡啶相互作用的研究

分别用核磁共振、紫外可见吸收和X射线单晶衍射方法研究对称四甲基六元瓜环与2-氨基甲基吡啶的相互作用及其结构特征. ¹H NMR谱图和紫外可见吸收光谱图清晰表明, 2-氨基甲基吡啶与对称四甲基六元瓜环有明显的相互作用, 客体2-氨基甲基吡啶的吡啶环部分进入了瓜环空腔, ¹H NMR谱图相关质子峰的积分强度以及客体吸光度随主体瓜环浓度变化明确表示它们之间形成了1∶1的包结配合物, 此包结比并不随瓜环的浓度增加而改变. X射线单晶衍射法对包结配合物晶体的测定进一步证实了核磁共振、紫外可见吸收方法所得结论.     

Structure and growth of single crystal SiP2 using flux method

A new orthorhombic phase of silicon diphosphide has been grown in Sn flux by using Gd as a mineralizer. It is a needle-like crystal and its structure has been determined through single crystal X-ray diffraction and elemental analysis. It crystallizes in the orthorhombic space group Pnma (No. 62, Z = 8) with cell parameters: a = 10.0908(19) Å, b = 3.4388(6) Å and c = 13.998(3) Å and the final R value is 0.0294. It has a layered structure that is closely related to the Pbam phase of SiP₂. Its optical band gap is 1.45 eV and it decomposes at 1002 K.     

Synthesis,structure, and catalytic property of a mononuclear dioxomolybdenum(VI) complex containing MoON core

Reaction of molybdenyl(IV) oxide bis(2,4-pentanedionate) with N′-(3-ethoxy-2-hydroxybenzylidene)-2-methoxybenzohydrazide in methanol affords a mononuclear dioxomolybdenum(VI) complex containing MoO₅N basic core. The complex has been characterized by various physicochemical techniques (IR and elemental analysis), and single crystal X-ray diffraction. X-ray crystal structure determination reveals that the complex crystallizes as monoclinic space group P2₁/c, with unit cell dimensions a = 9.251(1), b = 11.910(2), c = 17.636(3) Å, β = 103.220(2)°, V = 1891.7(5) ų, Z = 4, R ₁ = 0.0693, wR ₂ = 0.1691. The Mo atom in the complex is octahedrally coordinated, with the tridentate ONO ligand occupying the meridional sites. Thermal stability analysis was performed. The complex shows high catalytic property for the oxidation of various olefins.     

Synthesis,Structure and Photochromic Properties of 1-Phenyl-3-Methyl-4-(4-Bromobenzal)-Pyrazolone-5 Thiosemicarbazone

A new organic photochromic compound containing pyrazolone-ring, 1-phenyl-3-methyl-4-(4-bromobenzal)-pyrazolone-5 thiosemicarbazone (PM4BrBP-TSC), was synthesized and characterized by elemental analyses and single crystal X-ray diffraction. The X-ray determination indicated that PM4BrBP-TSC is of orthorhombic system, space group Pbca with cell dimensions of a = 12.184(2) Å, b = 18.121(3) Å, c = 18.554(4) Å, V = 4096.4(12) ų, Z = 8 and R = 0.0387. The photochromic properties and photocolored kinetics of PM4BrBP-TSC were studied by Time-dependent UV-Vis reflectance spectra and fluorescence spectra under 365 nm light irradiation. The crystal structure analysis showed that the photochromic properties were related to the photoisomerization from enol tautomer to keto one.     

Multiple endothermic peaks resulted from different crystal structures in an isomorphous copolymer poly(3-hydroxybutyrate-<Emphasis Type="Italic">co</Emphasis>-3-hydroxyvalerate)

The multiple endothermic peaks of poly(3-hydroxybutyrate-co-3-hydroxyvalerate) (P(HB-co-HV)) in differential scanning calorimetry (DSC) results, as one representative phenomenon of polymer with unique cocrystallization behavior, were generally considered as the results of melting/recrystallization. In this study, wide angle X-ray diffraction (WAXD) and small angle X-ray scattering (SAXS) experiments were conducted to analyze the phenomena of multiple endothermic peaks in DSC results. The results of these analyses indicated that the multiple endotherms were mainly caused by different lamellae structures. For P(HB-co-HV) with lower HV content, it was comprised of two structures of HV total exclusion and HV partial inclusion in the crystal lamellae. For P(HB-co-HV) with higher HV content, it was also comprised of two structures of HV total inclusion and HV partial inclusion in the crystal lamellae. However, only structure with HV partial inclusion in the crystal lamellae remained existing after first melting peak for all samples.     

Synthesis and analytical properties of (S)-(+)-2-methoxy-2-(9-phenanthryl)propionic acid

2-Methoxy-2-(9-phenanthryl)propionic acid was synthesized as a novel chiral resolving agent. The absolute configuration of (+)-2-methoxy-2-(9-phenanthryl)propionic acid was determined to be S by using X-ray structural analysis of the (1R,2S,5R)-menthyl ester. In the crystal, the methoxyl and carbonyl groups of the ester are in a syn-periplanar position. The syn-periplanar conformations of (1R,2S,5R)-menthyl esters were also observed by the NMR analyses in CDCl₃. The utility of (S)-(+)-2-methoxy-2-(9-phenanthryl)propionic acid was exemplified by the resolution of (±)-3-octanol.