Investigation of isothiocyanate addition to alkylidene derivatives of malononitrile and cyanoacetic acid esters

Addition of arylisothiocyanates to active methylene compounds leads to a variety of compounds depending on the structure of the starting material and conditions used to conduct the addition. Addition of arylisothiocyanate to 1c leads to a pyrido[2,3-d]pyrimidine resulting from addition of a second mole of cyanate to the initial adduct. Addition of arylisothiocyanate to 1b led to a mixture of pyridine and thiopyran adducts, while addition to 1a led to open chain structures.     

Static fatigue fracture of polyethylene: A morphological analysis

The fracture properties of a number of high-density polyethylenes were evaluated and related to their morphology. The resistance to initiation of fracture is related to the resistance to voiding of the materials and the rate of coalescence of voids. The propensity of the materials to void has been shown to be related to the size of the amorphous region. The resistance to propagation of the fracture is also related to the above factors as well as the ease of stretching and rupture of fibrils. The ease of fibril formation has been shown to be related to the degree of perfection of the crystallites.     

Identification of ligands that target the HCV-E2 binding site on CD81

Hepatitis C is a global health problem. While many drug companies have active R&D efforts to develop new drugs for treating Hepatitis C virus (HCV), most target the viral enzymes. The HCV glycoprotein E2 has been shown to play an essential role in hepatocyte invasion by binding to CD81 and other cell surface receptors. This paper describes the use of AutoDock to identify ligand binding sites on the large extracellular loop of the open conformation of CD81 and to perform virtual screening runs to identify sets of small molecule ligands predicted to bind to two of these sites. The best sites selected by AutoLigand were located in regions identified by mutational studies to be the site of E2 binding. Thirty-six ligands predicted by AutoDock to bind to these sites were subsequently tested experimentally to determine if they bound to CD81-LEL. Binding assays conducted using surface Plasmon resonance revealed that 26 out of 36 (72 %) of the ligands bound in vitro to the recombinant CD81-LEL protein. Competition experiments performed using dual polarization interferometry showed that one of the ligands predicted to bind to the large cleft between the C and D helices was also effective in blocking E2 binding to CD81-LEL.     

How mobile NMR can help with the conservation of paintings

The conservation of paintings is fundamental to ensure that future generations will have access to the ideas of the grand masters who created these art pieces. Many factors, such as humidity, temperature, light, and pollutants, pose a risk to the conservation of paintings. To help with painting conservation, it is essential to be able to noninvasively study how these factors affect paintings and to develop methods to investigate their effects on painting degradation. Hence, the use of mobile nuclear magnetic resonance (NMR) as a method of investigation of paintings is gaining increased attention in the world of Heritage Science. In this mini-review, we discuss how this method was used to better understand the stratigraphy of paintings and the effect different factors have on the painting integrity, to analyze the different cleaning techniques suitable for painting conservation, and to show how mobile NMR can be used to identify forgeries. It is also important to keep in mind its limitations and build upon this information to optimize it to extend its applicability to the study of paintings and other precious objects of cultural heritage.     

Addition of some α-halo ethers to unsaturated compounds

Summary The addition was carried out of 2-acetoxyethyl chloromethyl ether and of 2-chloroethyl chloromethyl ether to isobutene, to allyl chloride, to styrene, and to allyl acetate and also of 2-acetoxyethyl chloromethyl ether to butadiene and to ethyl cinnamate.     

A new method for estimating the importance of hydrogen-bonding groups in the binding site of a protein

We introduce a new method to estimate the importance of hydrogen-bonding sitepoints in the binding site of a protein as part of a structure-based design strategy. Our method identifies hydrogen-bonding sitepoints within a binding pocket and ranks them according to both the accessibility of their hydrogen bonding regions to incoming ligands and their hydrogen-bonding strength. The combination of these components produces a prioritised list of sitepoints that are more likely to be involved in hydrogen bonding with an incoming ligand. A dataset of known protein-ligand interactions was used to compare the prioritisation of sitepoints identified by our method with those observed to be engaged in hydrogen bonding in their crystal structures. Our method was able to remove those sitepoints unable to bind the ligand due to a low accessibility or an unfavourable orientation and to award significantly higher hydrogen-bonding ranking values to those sitepoints observed to form hydrogen bonds. Our method can thus be used to identify hydrogen-bonding sitepoints that should be targeted preferentially in a drug design strategy.     

Highly effective and enantioselective Phospho-Aldol reaction of diphenyl phosphite with N-alkylated isatins catalyzed by quinine

Cinchona alkaloids were first successfully reported to promote enantioselective Phospho-Aldol reaction of diphenyl phosphite to a variety of N-alkylated isatin derivatives in good to excellent yields (up to 99%) and moderate to good enantioselectivities (up to 73% ee) almost in no time.     

Curvature Effects in the Analysis of Pendant Bubble Data: Comparison of Numerical Solutions, Asymptotic Arguments, and Data

The pendant bubble method is commonly used to measure the evolution of the surface tension of surfactant solutions. Initially, the bubble interface is free of adsorbed surfactant. As time progresses, surfactant diffuses to the interface, adsorbs, and reduces the surface tension. The surface tension is assumed to be in equilibrium with the instantaneous surface concentration. Therefore, surface tension data are analyzed in terms of interfacial thermodynamics and mass transfer models in order to infer the mechanisms which determine the surfactant transport. Diffusion from the bulk solution to the bubble can be approximated as diffusion to a spherical interface. Approximating this process as diffusion to a plane introduces significant errors into the data analysis. Mass transfer to a sphere differs from that to a plane; the equilibration of the spherical interface is more rapid simply because of geometry. The failure to account for this effect in the interpretation of pendant bubble data can lead to serious errors in the transport coefficients for the surfactants. In the diffusion-controlled limit, surfactant diffuses to the sublayer immediately adjacent to the interface and adsorbs in local equilibrium according to the adsorption isotherm. There is a closed-form solution for Fick's law describing adsorption to a sphere in an infinite solution which reduces to the Ward and Tordai solution when the bubble radius is large. This equation, along with the adsorption isotherm relating the surface concentration and the sublayer concentration, must be solved numerically in order to solve for the time evolution of the surface concentration. At early times, the adsorption isotherm can be expanded about the clean interface state. At long times, small departures from the equilibrium state can be assumed. In these limits, asymptotic expansions can be obtained. The short- and long-time expansions are found in this study for adsorption to a sphere and compared to those obtained previously for adsorption to a planar interface. In particular, the long-time asymptote for adsorption to a sphere is proportional to t(-3/2); this asymptote differs significantly from that for adsorption to a plane, which goes as t(-1/2). The full solution for adsorption to a sphere is compared to the Ward and Tordai solution for adsorption to a planar interface. From a comparison of the full solutions, it is established that curvature cannot be neglected unless the ratio of the adsorption depth to the bubble radius is negligible. This ratio can be calculated a priori from equilibrium isotherm parameters. Using constants which describe the surfactant C(12)E(8), for which curvature plays a strong role in the surfactant adsorption dynamics, the short- and long-time solutions for adsorption to the interface are compared to the full solutions and to dynamic surface tension data to infer the range of validity of the approximations. Copyright 2001 Academic Press.     

Electrochemical approaches for the detection of amyloid-β, tau,and α-synuclein

According to the World Health Organization, there are 47 million people worldwide who are afflicted with dementia today, and this is expected to rise to 132 million by 2050. Therefore, it is pertinent to develop efficient analytical methods such as electrochemical biosensors to study these disorders and diagnose them early. This review highlights some of the recent key developments in the use of electrochemical biosensors to study the biomarkers related to neurodegenerative diseases such as Alzheimer's disease and Parkinson's disease. Especially, we focus on the applications of electrochemistry to analyze amyloid-β and tau related to Alzheimer's disease and α-synuclein related to Parkinson's disease.     

Gel formation in free radical polymerization via chain transfer and terminal branching

Gel formation in free-radical polymerization via chain transfer to polymer, recombination termination, and terminal branching due to either chain transfer to monomer or disproportionation termination is investigated using the method of moments. It is found that no gel can possibly form in the systems consisting of initiation, propagation, and one of the above reactions. However, systems with the following combination of reactions are found to be capable of gelling. They are: chain transfer to polymer + recombination termination; chain transfer to polymer + terminal branching due to disproportionation termination; and terminal branching due to transfer to monomer + recombination termination. Systems with the following combination of reactions are incapable of gelling; transfer to polymer + terminal branching due to transfer to monomer; and terminal branching due to disproportionation termination + recombination termination. An examination of the gelation mechanisms reveals that the formation of multivinyl macromonomers during the course of polymerization is the reason that systems involving terminal branching gel. Sol/gel diagrams are generated to give critical kinetic parameters required for gelation. It is found that terminal branching does not always promote gelation due to the adverse effect on chain length through chain transfer to monomer and termination by disproportionation, reactions which generate terminal double bonds. © 1994 John Wiley & Sons, Inc.     

Hygienic aspects related to burial

Burial grounds are generally provided by local authorities in cemeteries (subject to planning consent and to compliance with any considerations for environmental health). Their design has been submitted to studies of hydrogeological characteristics of soil with regard to its ability to purify wastewater coming from corpse decomposition, its ability to avoid the infiltration of pollutants in groundwater, and its ability to skeletonize buried corpses within the given times foreseen by the law in force. Greater environmental awareness has necessitated that new and existing burial grounds are assessed to determine the environmental load which they could release to soil or any downstream component. This problem arises in countries where there is a high density of built-up areas, a custom of disposing of the dead by burial, a lack of available spaces and suitable soils to designate as burial grounds. This paper reports some results from a study carried out on ground lands of Italy in order to revise articles 82 and 83 of the Decree No 285 of 1990 in force in relation to burial grounds. Soil permeability to water and air is a parameter of critical importance in relation to purification and/or diffusion of leachates from inhumed corpses in the soil, and in relation to its influence on the time necessary to completely skeletonize a human corpse.     

Adhesion between graphite and modified polyester surfaces: a theoretical study

This study examines the adhesion of graphite to functionalized polyester surfaces using a range of qualitative and quantitative measures of theoretical adhesion. Modifications to the polyester surfaces include the addition of hydroxyl, carboxyl, or fluorine substituents with coverages of 0.4 and 0.9 groups per nm(2). In each case, the introduction of substituents to the surface of the polyester was calculated to lead to reduced adhesion to graphite. Effects of surface relaxation on adhesion are studied by employing different simulation protocols. The theoretical results suggest one mechanism to reduce adhesion to carbonaceous solids is to increase atomic roughness using strongly hydrophilic or alternatively strongly hydrophobic substituents.     

Modification of Cyclodextrins for Use as Artificial Enzymes

The magical powers of enzymes have been attributed to their ability to bind specific substrates and catalyze reactions of the bound substrate. Artificial enzymes synthetically mimic the binding and the catalytic site to produce molecules that are not only smaller in size but also potentially have similar activity to the real enzymes. The main objective of our research is to create artificial redox enzymes by using cyclodextrins as binding sites and attaching flavin derivatives as the catalytic site. We have developed a strategy to attach a catalytic site to cyclodextrin exclusively at the 2-, 3- or the 6-position. The evaluation of the artificial enzyme in which flavin is attached to the 2-position gives a 647-fold acceleration factor. Although this is modest compared to those of real enzymes (which can have acceleration factors of a trillion), the artificial enzymes allow us to understand the elements that contribute to the incredible catalytic power of enzymes.     

Sodium Hypochlorite Reactions. III. The Catalytic Nakagawa and Related Systems

Mainly through the extensive investigations of Nakagawa and coworkers, nickel peroxide has emerged as a powerful oxidant for organic compounds. For example, it has been used for the oxidation of alcohols to aldehydes or carboxylic acids,^2,3 allylic hydroxyl (selectively) to the carbonyl group,⁴ α-ketols to α-diketones,⁵ α-glycols, α-ketols, α-hydroxyl and α-keto acids to cleavage products,⁶ aldehydes to amides or nitriles in the presence of ammonia,⁷ phenols to quinones,^8,9 certain Schiff bases to benzoxazoles,¹⁰ amines to azo compounds or nitriles,^11,12 diarylamines to hydrazines,¹³ carbazoles to dimers and trimers,¹⁴ hydrazones to diazo compounds,^15,16 1-aminobenzotriazole to benzyne,¹⁷ N-substituted hydroxylamines to azoxy compounds,¹⁸ phenylacetonitrile to dimeric products,¹⁹ a thiouracil to a uracil derivative,²⁰ thiols to disulfides and sulfides to sulfones,²¹ N-substituted phenothiazines to sulfoxides and sulfones,²¹ haloforms to hexahaloethanes.²³     

Using one- and two-dimensional NMR techniques to characterize reaction products bound to Chiron SynPhase crowns

Solid-phase MAS techniques have proved to be very useful in characterizing compounds bound to resin; however, little has been reported on using NMR to characterize compounds attached to Chiron SynPhase crowns. We have used proton, carbon, and COSY spectra obtained with a Varian Nano.nmr probe to characterize products from a published reaction sequence attached to MD (methacrylic acid/dimethylacrylamide copolymer) crowns. We have also performed solvent surveys to determine the best solvents for acquiring spectra of materials bound to both MD and PS (polystyrene) crowns.     

Diazo compounds for the bioreversible esterification of proteins

A diazo compound is shown to convert carboxylic acids to esters efficiently in an aqueous environment. The basicity of the diazo compound is critical: low basicity does not lead to a reaction but high basicity leads to hydrolysis. This reactivity extends to carboxylic acid groups in a protein. The ensuing esters are hydrolyzed by human cellular esterases to regenerate protein carboxyl groups. This new mode of chemical modification could enable the key advantages of prodrugs to be translated from small-molecules to proteins.     

Classification of wines from five Spanish origin denominations by aromatic compound analysis

Wine is a complex matrix in which aroma compounds play an important role in the characterization of the flavor pattern of a given wine. Twelve volatile compounds were determined in 244 samples of Spanish red wines from different denominations of origin: Rioja, Navarra, Valdepe?as, La Mancha, and Cari?ena. The samples were analyzed by GC using headspace solid-phase microextraction. The concentration (mg/mL) intervals obtained were 3-methyl-butyl acetate (3.9 to 116), 3-methyl-1-butanol (93 to 724), ethyl hexanoate (0.8 to 39), 1-hexanol (0.3 to 6.7), ethyl octanoate (1.4 to 41), diethyl succinate (0.2 to 13), 2-phenyl ethyl acetate (0 to 5.3), hexanoic acid (0 to 8.3), geraniol (0 to 3.0), 2-phenylethanol (1.5 to 56), octanoic acid (0 to 20), and decanoic acid (0 to 3.3). Wines were classified by multivariate statistical methods: principal component analysis, and lineal discriminant analysis. A correct differentiation among wines according to their origin was obtained by lineal discriminant analysis.     

“The Fitness of Their Union”: Travel and Health in the Letters of Humphry and Jane Davy

The letters of Humphry Davy and his circle, to be published shortly, shed new light on his marriage to Jane Apreece. This paper examines the journeys undertaken by the couple, together and separately, with particular attention to the therapeutic benefits they sought from travel. I argue that their increasingly divergent itineraries reflected a growing understanding that Humphry and Jane had different humoral temperaments or constitutions, leading them to seek different climatic conditions to cure their ailments. While Jane’s temperament was classified as melancholic, requiring her to travel to warmer and sunnier climes during the English winter, Humphry’s was believed to be sanguine, meaning he had to avoid excessive heat along with stimulating food and drink. He relied on classical ideas about individuals’ different humoral constitutions, and the therapies appropriate to them, while measuring atmospheric variables to determine the best places to restore his health. The Davys’ letters reveal the beliefs about bodily differences and atmospheric conditions that shaped their therapeutic travels.     

杨石先对农药化学学科的重要贡献及其学术思想

杨石先先生一生献身于我国的教育事业与化学学科的发展,在62年中为我国培养了无数高质量的科教人才。他除了长期担任南开大学校长之外, 还创建了我国大学第一个专职研究所,即元素有机化学研究所。他率先开展了我国元素有机化学与农药化学的科学研究,领导了元素有机化学国家重点实验室的建立,是我国元素有机化学和农药化学的奠基人和开拓者。他倡导用有机化学的专业知识,科学和系统地开展农药化学研究,组建队伍获得20项科研成果,发表上百篇科学与论述性论文,为我国开展自主创新农药研究事业作出重要贡献。在农药化学学科的学术思想中,他强调要弄清该学科的交叉性、系统性和内在规律性,倡导要学习国际先进经验,要结合国情自主创新,要为国家经济服务,要对世界农药科技做出贡献。他毕生对人才培养给予了特别的重视,为我国科技事业持续发展作出了重大贡献。     

Multiple‐injection high‐throughput gas chromatography analysis

Multiple‐injection techniques have been shown to be a simple way to perform high‐throughput analysis where the entire experiment resides in a single chromatogram, simplifying the data analysis and interpretation. In this study, multiple‐injection techniques are applied to gas chromatography with flame ionization detection and mass detection to significantly increase sample throughput. The unique issues of implementing a traditional “Fast” injection mode of multiple‐injection techniques with gas chromatography and mass spectrometry are discussed. Stacked injections are also discussed as means to increase the throughput of longer methods where mass detection is unable to distinguish between analytes of the same mass and longer retentions are required to resolve components of interest. Multiple‐injection techniques are shown to increase instrument throughput by up to 70% and to simplify data analysis, allowing hits in multiple parallel experiments to be identified easily.