Inclusion of nickel(<Emphasis Type="SmallCaps">II</Emphasis>) and copper(<Emphasis Type="SmallCaps">II</Emphasis>) complexes with aliphatic polyamines in cucurbit[8]uril

The inclusion compound of macrocyclic cavitand cucurbit[8]uril (CB[8]) with the nickel(II) complex containing the tetraazamacrocyclic ligand cyclam, {[Ni(cyclam)]@CB[8]}Cl₂··16H₂O (1), and the inclusion compounds of CB[8] with the copper(II) bis-ethylene-diamine complex, {trans-[Cu(en)₂(H₂O)₂]@CB[8]}Cl₂·{CB[8]}·42H₂O (2a) and {trans-[Cu(en)₂(H₂O)₂]@CB[8]}Cl₂·17H₂O (2b), were synthesized and characterized by X-ray diffraction analysis, IR and ESR spectroscopy, and electrospray mass spectrometry. Guest—host inclusion compounds can be directly synthesized starting from a metal complex and cucurbit[8]uril, as was exemplified by the preparation of compounds 2a and 2b.__________Published in Russian in Izvestiya Akademii Nauk. Seriya Khimicheskaya, No. 11, pp. 2414–2419, November, 2004.     

Coordination polymers based on zinc(<Emphasis Type="SmallCaps">ii</Emphasis>) and manganese(<Emphasis Type="SmallCaps">ii</Emphasis>) with 1,4-cyclohexanedicarboxylic acid

Three new metal-organic coordination polymers were obtained namely, [Mn₃(chdc)₃-(NMP)₂(DMF)₂] (1, chdc^2– is trans-1,4-cyclohexanedicarboxylate, NMP is N-methylpyrrolidone, DMF is N,N-dimethylformamide), [Zn₃(chdc)₃(NMP)₂]?2NMP (2), and [Zn₃(chdc)₃(ur)-(DMF)_0.5]?DMF (3, ur is the urotropine). The crystal structures of polymers 1, 2, and 3 were determined by single-crystal X-ray crystallography. All three compounds were found to contain a trinuclear secondary building unit {M₃(OOC)₆}. Coordination polymers 1 and 2 have a layered structure, while polymer 3 has a three-dimensional coordination framework with isolated pores formed due to the presence of urotropine bridging molecules. Compounds 1 and 3 were characterized by IR spectroscopy, thermogravimetric and elemental analysis data, powder X-ray diffraction. Compound 3 was also characterized by UV-Vis diffuse reflectance spectrum.     

Inclusion compounds of cucurbit[<Emphasis Type="Italic">n</Emphasis>]urils with metal complexes

A new class of supramolecular compounds—inclusion compounds of metal complexes encapsulated in organic macrocyclic cavitands cucurbit[n]urils (CB[n], C_6n H_6n N_4n O_2n , n = 7−10)—has been surveyed. A unique combination of a rather rigid hydrophobic intramolecular cavity and negatively charged portals favors the formation of stable host-guest compounds. Basic methods of synthesis of inclusion compounds of CB[n] with metal complexes have been reported, and the structures of the resulting products isolated as crystals and characterized by X-ray crystallography have been considered. The effect of encapsulation on the geometric and spectral characteristics of the complexes and their redox properties has been traced. It has been shown that encapsulation in CB[n] can lead to a change in the reactivity of the complexes in thermolysis and isomerization and aquation reactions. Encapsulation of biologically active metal complexes in CB[n] is a promising strategy for designing new-generation prolonged-action pharmaceuticals.     

Complexing properties of 1-[5-(hydrazidomethylsulfinyl)pentyl]-3,5-dimethylisocyanurate with cobalt(<Emphasis Type="SmallCaps">ii</Emphasis>), nickel(<Emphasis Type="SmallCaps">ii</Emphasis>), and iron(<Emphasis Type="SmallCaps">iii</Emphasis>)

Composition and thermodynamic stability of complexes of 1-[5-(hydrazidomethylsulfinyl)pentyl]-3,5-dimethylisocyanurate with cobalt(ii), nickel(ii), and iron(iii) in H₂O—DMSO medium (60 vol.% DMSO) was studied by spectrophotometry, potentiometric titration, and mathematical modeling (CPESSP program). The geometries of all studied structures were optimized by the MM2 molecular mechanics method to obtain the primary target data (estimates) on coordination pattern of 1-[5-(hydrazidomethylsulfinyl)pentyl]-3,5-dimethylisocyanurate in complexes with cobalt(ii), nickel(ii), and iron(iii). Cobalt(ii) and nickel(ii) formed the 1 : 1 complexes; while iron(iii) under experimental conditions excluding redox reactions gave the 1 : 1 and 1 : 2 complexes. All complexes contain ligands in neutral form.     

New tin(<Emphasis Type="SmallCaps">iv</Emphasis>) <Emphasis Type="Italic">o</Emphasis>-iminosemiquinone complexes

New tin(iv) mono- and bis-o-iminosemiquinone complexes were obtained by the exchange reaction of radical anion lithium salt of 4,6-di-tert-butyl-N-(2,6-diisopropylphenyl)-o-imino-benzoquinone with tin(iv) organochlorides. The compounds synthesized were characterized by EPR spectroscopy and X-ray diffraction analysis. Substituents on the tin atom were found to affect stability of paramagnetic metal derivatives formed.     

Mechanochemical synthesis of platinum(<Emphasis Type="SmallCaps">IV</Emphasis>) complexes with <Emphasis Type="Italic">N</Emphasis>-heterocyclic carbenes

A new method for the synthesis of complexes Pt^IV(NHC)X₄L (NHC is N-heterocyclic carbene of imidazole or benzimidazole series; X = Cl, Br; L is N-coordinated pyridine or NHC) based on mechanochemical oxidation of complexes Pt^II(NHC)X₂L with dichloroiodobenzene (PhICl₂) or pyridinium hydrobromide perbromide (PyHBr₃) was proposed. Mechanochemical activation led to reduction in the synthesis time and increase in the selectivity of halogenation and yields of the target Pt^IV complexes (74–98%) as compared to the reaction in solutions.     

Ferrocene-containing tri- and tetranuclear cyclic copper(<Emphasis Type="SmallCaps">i</Emphasis>) and silver(<Emphasis Type="SmallCaps">i</Emphasis>) pyrazolates

New tri- and tetranuclear macrocyclic silver(i) and copper(i) 3-ferrocenyl-5-(trifluoromethyl)pyrazolates were prepared: [{(3-((η⁵-C₅H₄)Fe(η⁵-C₅H₅))-5-(CF₃)-Pz}M]₃ (M = Cu (1), Ag (2)) and [{(3-(( η⁵-C₅H₄)Fe(η⁵-C₅H₅))-5-(CF₃)-Pz}Cu]₄ (3). The structures of compounds were established by X-ray diffraction analysis. In the crystalline state, a planar trinuclear silver-containing macrocycliс pyrazolate and a saddle-shaped tetranuclear copper-containing macrocycle are formed. The introduction of a bulky substituent, ferrocene, into the pyrazole ligand results in complete shielding of the acidic metal sites, which precludes the coordination of base molecules.     

Hyperbranched polyester poly(3-diethylamino)propionates and their copper(<Emphasis Type="SmallCaps">ii</Emphasis>) complexes

Novel polydentate ligands were obtained from second and third generation hyperbranched polyesters containing terminal (3-diethylamino)propionate groups. Polynuclear Cu^II complexes with these ligands were synthesized. The degree of diethylamination of the polyesters increases when moving from the second to the third generation (from 56 to 81%). In polynuclear complexes, the ratios of Cu to hyperbranched ligand are 6 : 1 and 13 : 1 for second and third generation polyester polyamines, respectively. It was demonstrated using IR and ESR spectroscopy that each coordination polyhedron in the complexes is an isolated paramagnetic center of the formula CuN₂O₂Solv₂ (Solv = H₂O, DMSO).     

Synthesis and studies of spectroscopic and electrochemical properties of dinuclear ruthenium(<Emphasis Type="SmallCaps">II</Emphasis>) and manganese(<Emphasis Type="SmallCaps">II</Emphasis>) complexes

New dinuclear ruthenium manganese complexes of general composition (bpy)₂Ru(L)MnCl_x(H₂O)₂ (L is 1,10-phenanthroline-5,6-dione, 3,3′-dicarboxy-2,2′-bipyridyl, or bis(pyrazolyl); x = 2 or 4) were synthesized by the reaction of (bpy)₂Ru(L) with MnCl₂ · 4H₂O. These compounds and the starting mononuclear ruthenium complexes were studied by spectrophotometric and electrochemical methods in MeCN. The position of the charge-transfer band Ru^II → L in the spectra depends on the donor-acceptor characteristics of the ligand L. For the dinuclear complex under study, the formal potentials of reversible one-electron oxidation of Ru^II are in the range of 0.9–1.2 V (vs. the standard hydrogen electrode), whereas oxidation of Mn^II occurs at more positive (by 0.1–0.2 V) potentials. Published in Russian in Izvestiya Akademii Nauk. Seriya Khimicheskaya, No. 10, pp. 2281–2285, October, 2005.     

Synthesis of metallacarborane ruthenium(<Emphasis Type="SmallCaps">ii</Emphasis>) and ruthenium(<Emphasis Type="SmallCaps">iii</Emphasis>) complexes with chelate 1,3-bis(diphenylphosphino)propane ligand and their mutual transformation in one-electron redox reactions

The first example of 12-vertex metallapolyhedra, namely, tris-phosphorus-containing closo-metallacarborane ruthenium(II) cluster Open image in new window , was synthesized and structurally studied. A principal possibility of the use of aliphatic amines as one-electron reducing agents converting carborane ruthenium(III) complexes to structurally close ruthenium(II) compounds was experimentally demonstrated.     

Quantum chemical calculations for the geometry and intramolecular rearrangements of a model nickel(<Emphasis Type="SmallCaps">ii</Emphasis>) <Emphasis Type="Italic">o</Emphasis>-semiquinone complex with a PCP pincer ligand

The structure and intramolecular rearrangements of the model five-coordinate nickel PCP-pincer complex with the o-semiquinone ligand were studied by the density functional theory method at the B3LYP/6-311++G(d,p) level. The isomerization associated with swing vibrations of the o-semiquinone ligand can occur virtually barrierless (0.7 kcal mol⁻¹). The dynamics of the coordination sphere determined by pendulum vibrations of the o-semiquinone ligand has the energy barriers of 4–5 kcal mol⁻¹, which is in good agreement with experimental data. A comparison of the results of calculations with the ESR spectroscopic data revealed the dependence of the types and the energy characteristics of intramolecular rearrangements on the nature of substituents at the phosphorus atom.     

Synthesis of 6-methyl-8<Emphasis Type="Italic">H</Emphasis>-dibenzo[<Emphasis Type="Italic">a</Emphasis>,<Emphasis Type="Italic">g</Emphasis>]quinolizin-8-imines <Emphasis Type="Italic">via Reissert</Emphasis> compounds

Alkylation of Reissert compounds derived from 3-methylisoquinolines with several 2-cyanobenzylbromides followed by hydrolytic cleavage provided the corresponding 1-benzyl-3-methylisoquinolines. Treatment of the latter with methylmagnesiumiodide caused cyclization to the title compounds rather than formation of 2-acetylbenzylisoquinolines.     

Quantum-chemical study of the formation mechanism of cucurbit[<Emphasis Type="Italic">n</Emphasis>]uril nanocavitands

The quantum-chemical study of the formation mechanism of cucurbit[n]urils CB[n] has been performed by the PBE density functional theory method. According to the thermodynamic characteristics of separate stages of CB[n] formation, the oligomer-bound water molecules formed in the course of synthesis are responsible for the predominant formation of CB[6] as compared with other CB[n] nanocavitands.     

Estimation of the specific content and nature of sorption sites of iron(<Emphasis Type="SmallCaps">III</Emphasis>) and zirconium(<Emphasis Type="SmallCaps">IV</Emphasis>) oxyhydroxides

The sorption of anions H₂PO₄ ⁻, HPO₄ ²⁻, PO₄ ³⁻, [Fe(CN)₆]³⁻, and [Fe(CN)₆]⁴⁻ from aqueous solutions on the surface of Fe^III and Zr^IV oxyhydroxide hydrogels freshly precipitated at pH 4–13 was studied. The region of sorbate concentrations was from 0.00025 to 0.06 mol L⁻¹. The plots of the anion uptakes vs. their equilibrium concentrations are represented by isotherms of the first type, which are well described by the Langmuir equation if the quantity of the amount adsorbed is expressed as mol-site g⁻¹. The maximum uptakes and constants of the Langmuir equation were calculated. The phosphate anions occupy the same number of sorption sites on the sorbents precipitated at different pH. The average specific content of sorption sites for the ferro- and zirconogels in the metastability period is independent of the pH of their precipitation, being 3.1·10⁻³ and 3.2·10⁻³ mol-site g⁻¹, respectively. The [Fe(CN)₆]³⁻ and [Fe(CN)₆]⁴⁻ anions are sorbed only on the positively charged sites of the hydrogels and occupy not more than 2·10 mol-site g⁻¹ in the studied interval of pH of precipitation. __________ Published in Russian in Izvestiya Akademii Nauk. Seriya Khimicheskaya, No. 8, pp. 1736—1741, August, 2005.     

Optical enzyme sensor for determining <Emphasis Type="SmallCaps">l</Emphasis>-lysine content using <Emphasis Type="SmallCaps">l</Emphasis>-lysine oxidase from the rockfish <Emphasis Type="BoldItalic">Sebastes schlegeli</Emphasis>

l-Lysine (l-Lys) in living bodies is critical for metabolism; therefore, determination of its levels in food is important. Most enzymatic methods for l-Lys analysis are performed using l-lysine oxidase (LyOx), but commercially manufactured LyOx is generally not highly selective for l-Lys among amino acids. We previously isolated LyOx as an antibacterial protein secreted from the skin of the rockfish Sebastes schlegeli. In the present study, we developed an optical enzyme sensor system for rapid and continuous determination of l-Lys using this LyOx. The system comprised an immobilized LyOx membrane, an optical oxygen probe, a flow system, and a personal computer. The amount of l-Lys was detected as a decrease in the oxygen concentration due to the LyOx reaction. The specificity of the sensor was examined against various amino acids. The sensor response was specific for l-Lys. Good reproducibility was obtained in 58 assays. The response of the sensor using commercially prepared LyOx was unstable compared with the response using LyOx isolated in our laboratory. Our sensor system could be used for 5 weeks without our having to change the enzyme membrane. The calibration curve for a standard l-Lys solution was linear from 0.1 to 3.0 mmol L⁻¹. One assay could be completed within 2 min. The sensor was applied to determine the l-Lys content in food samples such as bonito cooking water and scallop hepatopancreas. The values obtained using the sensor and conventional high-performance liquid chromatography methods were well correlated.     

Bioconversion of <Emphasis Type="SmallCaps">d</Emphasis>-glucose into <Emphasis Type="SmallCaps">d</Emphasis>-glucosone by Glucose 2-oxidase from <Emphasis Type="Italic">Coriolus versicolor</Emphasis> at Moderate Pressures

Glucose 2-oxidase (pyranose oxidase, pyranose:oxygen-2-oxidoreductase, EC 1.1.3.10) from Coriolus versicolor catalyses the oxidation of d-glucose at carbon 2 in the presence of molecular O₂ producing d-glucosone (2-keto-glucose and d-arabino-2-hexosulose) and H₂O₂. It was used to convert d-glucose into d-glucosone at moderate pressures (i.e. up to 150 bar) with compressed air in a modified commercial batch reactor. Several parameters affecting biocatalysis at moderate pressures were investigated as follows: pressure, [enzyme], [glucose], pH, temperature, nature of fluid and the presence of catalase. Glucose 2-oxidase was purified by immobilized metal affinity chromatography on epoxy-activated Sepharose 6B-IDA-Cu(II) column at pH 6.0. The rate of bioconversion of d-glucose increased with the pressure since an increase in the pressure with compressed air resulted in higher rates of conversion. On the other hand, the presence of catalase increased the rate of reaction which strongly suggests that H₂O₂ acted as inhibitor for this reaction. The rate of bioconversion of d-glucose by glucose 2-oxidase in the presence of either nitrogen or supercritical CO₂ at 110 bar was very low compared with the use of compressed air at the same pressure. The optimum temperature (55°C) and pH (5.0) of d-glucose bioconversion as well as kinetic parameters for this enzyme were determined under moderate pressure. The activation energy (E _a) was 32.08 kJ mol⁻¹ and kinetic parameters (V _max, K _m, K _cat and K _cat/K _m) for this bioconversion were 8.8 U mg⁻¹ protein, 2.95 mM, 30.81 s⁻¹ and 10,444.06 s⁻¹ M⁻¹, respectively. The biomass of C. versicolor as well as the cell-free extract containing glucose 2-oxidase activity were also useful for bioconversion of d-glucose at moderate pressures. The enzyme was apparently stable at moderate pressures since such pressures did not affect significantly the enzyme activity.     

Development of transition state analogue inhibitors for <Emphasis Type="Italic">N</Emphasis>-acetylglycosyltransferases bearing <Emphasis Type="SmallCaps">d</Emphasis>psico- or <Emphasis Type="SmallCaps">d</Emphasis>tagatofuranose scaffolds

New potential transition state analogue inhibitors for N-acetylglucosyltransferases (GnTs) were synthesised. These compounds based on psico- and tagatofuranose (structure) scaffold contained a 2-thiophenyl-1-O-diethylphosphate moiety mimicking the proposed model of the transition state of the enzymatic reaction catalysed by N-acetylglucosyltransferases. The synthesised compounds as well as their precursors were fully characterised by NMR, optical rotation and mass techniques. Anomeric configuration of tagatofuranose derivatives was confirmed by X-ray crystallography. Two types of potential human glycosyltransferase (GnTs) inhibitors representing donor UDP-GlcNAc, assigned for biological assays on human GnTs, were prepared.     

Tuning thermal gelling behavior of <Emphasis Type="Italic">N</Emphasis>-isopropylacrylamide based copolymer through introducing cucurbit[8]uril ternary complex on side-chain

Thermo-gelation polymers have attracted increasing attention over decades. However, rare facile tuning method of sol-gel transition temperature restricted the wider application. Preceding study indicated that supramolecular interactions demonstrated a powerful means to control the structure and property of polymeric materials. Here we designed an N-isopropylacrylamide (NIPAM) based thermo-sensitive copolymer with naphthyl (Np) on its side chain. Positive-charged side-chain ternary complex was formed with cucurbit[8]uril (CB[8]) and methylviologen (MV²⁺) via CB[8]-enhanced intermolecular charge-transfer (CT) interaction. Introducing the ternary complex CB[8]/MV²⁺/Np on side-chain altered microstructure of macromolecular chains and led to a strong tendency for thermo gelation. Altering content of CB[8] and MV²⁺ changed content of the positive-charged side-chain ternary complex and varied gelation temperature. Therefore, introducing supramolecular interaction endowed the hydrogel with tunable gelation property.     

Interaction of host-guest complexes of cucurbit[<Emphasis Type="Italic">n</Emphasis>] urils with double probe guests

Three guests with two moiety probes for different Cucurbit[n = 6-8]urils have been synthesized. They are N-(2-methylenethiophen)-adamataneamine, N-(2-methylene pyrrole)-adamataneamine and N-(2-methylenefurfuran)-adamataneamine. The probes are methyle-nepyridyl typically for Q[6] and adamataneamine typically for Q[7]. The host-guest complexes of Cucurbit[n = 6-8]urils with these guests have been investigated by using NMR techniques and ESMS method. Also, thermoanalysis has been used for exploring relationship of enthalpy and stability of the host-guest complexes.