Interplay between halogen bonds and π-π stacking interactions: CSD search and theoretical study

According to our survey of the Cambridge Structural Database (CSD), a great number of crystal structures, in which halogen bonds and aromatic stacking interactions are present and play an important role in crystal packing, have been extracted. In this work, ab initio calculations at the MP2 level of theory were performed to investigate the mutual influence between halogen bonds and π-π stacking interactions. Different energetic effects are observed in the studied complexes where the two kinds of noncovalent interactions coexist, which can be rationalized by the direction of charge transfer for the two interactions. These effects have been analyzed in detail in terms of the structural, energetic, and charge transfer properties of the complexes. In addition, the quantum theory of atoms in molecules (QTAIM) was also employed to characterize the interactions and to examine the strengthening or weakening of the interactions, depending on the variations of electron density on the bond and cage critical points. Finally, certain crystal structures retrieved from the CSD have been selected to provide experimental evidence of the combination of the two interactions.     

Time-resolved fluorescence of α-(9-anthryl)-ω-(1-naphthyl)-oligosilanes: intramolecular electronic energy and charge transfer through π-π and σ-π interactions

The photophysical properties of a series of α,ω-diaryloligosilanes: (9-anthryl)-(SiMe₂)_n-(1-naphthyl) (1-4, and 6), n=1, 2, 3, 4, and 6, were investigated. For n?2, the intramolecular exciplex emission was observed in cyclohexane. For the stationary and the time-resolved fluorescence (TR-FL) measurements, the excitation of the naphthyl moiety showed a very efficient intramolecular energy transfer to the anthryl moiety, thus only fluorescence from the anthryl moiety was observed. In the case of 4 and 6, a charge-transfer (CT) emission was observed in acetonitrile. Then TR-FL of 6 revealed that the intramolecular-energy transfer from the naphthyl to anthryl moieties is faster than the CT.     

Selective stabilization of self-assembled hydrogen-bonded molecular capsules through π-π interactions

Subtle noncovalent forces such as π-π interactions play an import role in the folding of biological macromolecules such as DNA and proteins. We describe here a system where such interactions on the outside of a molecular capsule trigger a selective change of its structure as a self-assembled receptor.     

Complexation of monosubstituted benzenes and methanes by cyclotetrachromotropylene in aqueous solution: Substituent effects on π-π and Ch-π interactions

The stability constantsK of 11 complexes formed in aqueous solution between several monosubstituted benzenes (C₆H₅X) and methanes (CH₃X) as guests and cyclotetrachromotropylene as host were determined by proton NMR spectroscopy. Variations ofK with the substituent X are attributed to the electronic effect of X and the presence of C–H or aromatic bonds, if any, interacting with the host bonds.     

Interchromophoric interactions in chiral X-type π-conjugated oligomers: a linear and nonlinear optical study

A concept of chiral, X-type organized π-conjugated oligomers, linked by means of a binaphthalene pincer, is presented. NMR spectroscopy and cyclic and differential pulse voltammetry indicate that these oligomers are in close proximity and influence each other in a through-space manner in their neutral as well as in their oxidized states. The interaction between the oligomers was also confirmed by UV-vis, CD, and emission spectroscopy. The synthetic versatility of this design also enables the development of heterocoupled binaphthalene derivatives BN1-2 and BN1-3, consisting of an electron-neutral oligothiophene or electron-rich oligomer and an electron-poor oligothiazole. Hyper-Rayleigh scattering data show a significant enhancement of the second-order nonlinear hyperpolarizability β for BN1-3 and BN1-2, in contrast with the homocoupled binaphthalene derivatives (BN1-1, BN2-2, and BN3-3). This enhancement provides direct proof for the through-space charge-transfer interaction between the p-type and the n-type oligomers within BN1-3 and BN1-2.     

Fine competition and control among argentophilic,electrostatic, and π···π interactions in a molecular chair structure

The reaction of AgX (X⁻ = NO₃ ⁻, ClO₄ ⁻, or CF₃SO₃ ⁻) with 1,3-bis(3-pyridyl)tetramethyldisiloxane (L) at room temperature affords 20-membered metallacyclodimers, [Ag(L)]₂(X)₂. For the macrocyclodimer, fine competition among argentophilic, electrostatic, and π···π interaction exists. The macrocyclodimer is a unique molecular chair that tunes a transannular argentophilic interaction via the bite size of the counteranions. In order to reversibly control the argentophilic interaction, anion exchange has been accomplished. The anion exchangeability depends on the water solubility rather than the electrostatic interaction between silver(I) and anions.     

Energetic effects between halogen bonds and anion-π or lone pair-π interactions: a theoretical study

Energetic effects between halogen bonds and anion-π or lone pair-π interactions have been investigated by means of ab initio MP2 calculations. 1,4-diiodo-perfluorobenzene, a very effective building block for crystal engineering based on halogen bonding, is selected in this work both as electron-deficient π aromatic ring and as halogen bond donor. Additive and diminutive effects are observed when halogen bonds and anion-π/lone pair-π interactions coexist in the same complex, which can be ascribed to the same direction of charge transfer for the two interactions. These effects have been analyzed in detail by the structural, energetic, and AIM properties of the complexes. Finally, experimental evidence of the combination of the interactions has been obtained from the Cambridge Structural Database.     

Diisocyanoarene-linked pentacarbonylvanadate(I-) ions as building blocks in a supramolecular charge-transfer framework assembled through noncovalent π-π and contact ion interactions

Three synthetic routes to the unusual supramolecular complex ([Cp(2)Co](2)[{(OC)(5)V}(2)(μ-1,4-CNC(6)Me(4)NC)])(∞), which was crystallographically characterized, are presented. The dianion [{(OC)(5)V}(2)(μ-1,4-CNC(6)Me(4)NC)](2-) constitutes the first subvalent organometallics featuring a diisocyanoarene linker.     

Geometric effects in olefinic cation-π interactions with alkali metals: a computational study

Although cation-π interactions commonly involve aromatic or heteroaromatic rings as the source of π-electrons, isolated and nonconjugated olefins are equally effective donors of π-electron density. Previous comparisons of these π-electron sources have indicated that the net energy of the binding interactions is not a simple additive function of the number of π-bonds involved. For instance, the enthalpy of binding (ΔH°) of Li(+), Na(+), or K(+) cations to two ethylene molecules or to one benzene molecule is approximately the same, despite the 4:6 ratio of π-electrons involved. This present density functional theory study indicates that geometric factors can partially account for the proportionally greater interaction energies of olefins, but whether they are symmetrically placed around the cation or grouped on one hemisphere has little effect on the binding energy. Instead, flexible ligands that permit olefinic π-electrons to be oriented more favorably toward the metal than those in rigid aromatic rings can be correlated with greater bonding. For Li(+) complexes, this appears to be an appreciable factor, although it is less significant with Na(+) and K(+) complexes. For all three cations, stronger polarization interactions with olefins compared to arenes contribute to the strength of cation-π interactions involving olefinic π-bonds.     

Associative combination of lone pair-π, π-π and anion-π interactions observed in a ternary system comprising Mg(II)-malonate-2-aminopyridine-hexafluoridophosphate

One Mg(II) malonate complex with protonated 2-aminopyridine and hexafluoridophosphate as counterions, (C₅H₇N₂)₄[Mg(C₃H₂O₄)₂(H₂O)₂](PF₆)₂ (1) [C₅H₇N₂ = protonated 2-aminopyridine, C₃H₄O₄ = malonic acid] has been synthesized from purely aqueous media just by mixing the reactants in their stoichiometric proportion and its crystal structure has been determined by single-crystal X-ray diffraction. The role of weak forces like lone pair?π and anion?π interactions in influencing the self-assembly process appears to be of importance. A rare combination of lone pair?π and anion?π interactions in 1, of the type lone pair?π/π?π/π?anion, is observed, and this unusual supramolecular network is fully described here.     

Unprecedented π···π interaction between an aromatic ring and a pseudo-aromatic ring formed through intramolecular H-bonding in a bidentate Schiff base ligand: crystal structure and DFT calculations

A combination of a single crystal X-ray diffraction study and density functional theory calculations has been applied to a bidentate Schiff base compound to elucidate different cooperative non-covalent interactions involved in the stabilization of the keto form over the enol one in the solid state. The single crystal X-ray structure reveals a remarkable supramolecular assembly of the keto form through a cyclic hydrogen bonded dimeric motif. The most interesting feature in the supramolecular assembly is the formation of a 'dimer of dimer' motif by π···π, CH···π and N···O/O···O interactions in which the π···π interaction involving the aromatic phenyl ring and the intramolecularly hydrogen bonded pseudo-aromatic ring of the keto form lying just above or below the phenyl ring of the other dimer seems to be unprecedented. The optimized geometry of the hydrogen bonded dimeric motif of the keto form of the organic molecule has been obtained by DFT calculations and agrees very well with that found within the crystalline state. The X-ray crystallographic geometry of the 'dimer of dimer' has also been computed, which shows that in the HOMO, the π electrons are localized in the phenyl rings away from each other, while in the LUMO, there is a strong π-π interaction between the phenyl ring of one dimer with the pseudo-aromatic ring of another dimer with an energy estimated to be 7.95 kJ mol(-1). Therefore, on HOMO → LUMO excitation there is localization of π electrons in the central part of the complex moiety which plays a stabilizing role of the dimer of dimer motif in the solid state.     

Field-induced π-polarization in barrelene derivatives: a computational study based on structural variation

Barrelene, H–C(CH=CH)₃C–H, is an unsaturated polycyclic hydrocarbon containing three isolated double bonds in a non-planar arrangement. We have studied the transmission of field effects through the barrelene framework by analyzing the small structural changes occurring in the phenyl group of many Ph–C(CH=CH)₃C–X molecules, where X is a variable substituent. Molecular geometries have been determined by quantum chemical calculations at the HF/6-31G* and B3LYP/6-311++G** levels of theory. Comparison with the results obtained for the corresponding saturated molecules, the bicyclo[2.2.2]octane derivatives Ph–C(CH₂–CH₂)₃C–X, reveals a small, but significant, field-induced π-polarization of the barrelene cage, especially when the remote substituent is a charged group. Additional evidence of π-polarization is obtained by comparing the electric dipole moments of the two sets of uncharged molecules. The structural variation of the barrelene cage caused by the variable substituent in Ph–C(CH=CH)₃C–X molecules has also been investigated. It is much larger than that of the phenyl group and depends primarily on the electronegativity of the substituent. Particularly pronounced is the concerted variation of the non-bonded distance between the bridgehead carbons of the cage, r(C···C) ₁ ^BARR , and the average of the three C–C–C angles at the cage carbon bonded to the variable substituent, α ₁ ^BARR . A scattergram of r(C···C) ₁ ^BARR versus the corresponding parameter for bicyclo[2.2.2]octane derivatives, r(C···C) ₁ ^BCO , shows that the variation of r(C···C) ₁ ^BARR becomes gradually less pronounced than that of r(C···C) ₁ ^BCO as the electronegativity of the substituent increases.     

Synthesis, structure and photophysical properties of binuclear methylplatinum complexes containing cyclometalating 2-phenylpyridine or benzo{h}quinoline ligands: a comparison of intramolecular Pt-Pt and π-π interactions

The binuclear cyclometalated complexes [Pt(2)Me(2)(ppy)(2)(μ-dppm)], 1a, and [Pt(2)Me(2)(bhq)(2)(μ-dppm)], 1b, in which ppy = 2-phenylpyridyl, bhq = benzo{h}quinoline and dppm = bis(diphenylphosphino)methane, were synthesized by the reaction of [PtMe(SMe(2))(ppy)] or [PtMe(SMe(2))(bhq)] with 1/2 equiv of dppm at room temperature, respectively. Complexes 1a and 1b were fully characterized by multinuclear ((1)H, (31)P, (13)C, and (195)Pt) NMR spectroscopy and were further identified by single crystal X-ray structure determination. A comparison of the intramolecular Pt-Pt and π-π interactions in complexes 1a and 1b has been made on the basis of data on crystal structures and wave functions analysis. The binuclear complexes 1a and 1b are luminescent in the solid state, and showing relatively intense orange-red emissions stemming from (3)MMLCT excited states. The reaction of complex 1b with excess MeI gave the binuclear cyclometalated Pt(IV)-Pt(IV) complex [Pt(2)Me(4)(bhq)(2)(μ-I)(2)], 2. Crystal structure of complex 2 shows intermolecular C-H···I and C-H···π interactions in solid state.     

Stabilization of β-hairpin structures via inter-strand π-π and hydrogen bond interactions in α-, β-, γ-hybrid peptides

Synthesis and conformational studies of α-, β-, γ-hybrid peptides containing a pyrrole amino acid (Paa, 1) and a furan amino acid (Faa, 2), namely Boc-β-Phe-Faa-d-Pro-Gly-Paa-β-HGly-Faa-OMe (3) and Boc-Paa-β-Phe-Faa-d-Pro-Gly-Paa-β-HGly-Faa-OMe (4), were carried out and they adopt β-hairpin structures stabilized via inter-strand π-π and hydrogen bonding interactions.     

Folding of a supramolecular framework based on a tetrametallic clip driven by π-π interactions

Supramolecular extended frameworks based on a rotational molecular clip and having the same "primary structure" can exhibit either an unfolded or a folded framework. This process is driven by intramolecular π-π interactions, resulting in the formation of an infinite π-stacked column within the folded supramolecular framework.     

Charge-transfer interactions between piperidine as donor with different σ- and π-acceptors: Synthesis and spectroscopic characterization

Charge-transfer (CT) complexes formed between piperidine (Pip) as donor with monoiodobromide (IBr), 2,3-dichloro-5,6-dicyano-1,4-benzoquinone (DDQ), 2,6-dichloroquinone-4-chloroimide (DCQ), and 2,6-dibromoquinone-4-chloroimide (DBQ), as acceptors have been studied spectrophotometrically. The synthesis and characterization of piperidine CT-complexes of monoiodobromide, [(Pip)(IBr)], 2,3-dichloro-5,6-dicyano-1,4-benzoquinone, [(Pip)(DDQ)], 2,6-dichloroquinone-4-chloroimide, [(Pip)(DCQ)] and 2,6-dibromoquinone-4-chloroimide, [(Pip)(DBQ)] were described. These complexes are readily prepared from the reaction of Pip with IBr, DDQ, DCQ and DBQ within CHCl₃ solvent. IR, UV–Vis techniques and elemental analyses (CHN), characterize the four piperidine charge-transfer complexes. Benesi–Hildebrand and its modification methods were applied to the determination of association constant (K), molar extinction coefficient (?).     

Substituent effects in cation-π interactions: a unified view from inductive, resonance, and through-space effects

The quantification of inductive (I), resonance (R), and through-space (TS) effects of a variety of substituents (X) in cation-π interactions of the type C?H?X···Na? is achieved by modeling C?H?-(Φ?)(n)-X···Na? (1), C?H?-(Φ?)(n)-X···Na? (2), C?H?-(Φ(2perpendicular))(n)-X···Na? (2'), and C?H? ···HX···Na? (3), where Φ? = -CH?CH?-, Φ? = -CHCH-, Φ(2perpendicular) indicates that Φ? is perpendicular to the plane of C?H?, and n = 1-5. The cation-π interaction energies of 1, 2, 2', and 3, relative to X = H and fitted to polynomial equations in n have been used to extract the substituent effect E?1, E?2, E?(2'), and E?3 for n = 0, the C?H?X···Na? systems. E?1 is made up of inductive (E(I)) and through-space (E(TS)) effects while the difference (E?2 - E?(2')) is purely resonance (E(R)) and E?3 is attributed to the TS contribution (E(TS)) of the X. The total interaction energy of C?H?X···Na? is nearly equal to the sum of E(I), E(R), and E(TS), which brings out the unified view of cation-π interaction in terms of I, R, and TS effects. The electron-withdrawing substituents contribute largely by TS effect, whereas the electron-donating substituents contribute mainly by resonance effect to the total cation-π interaction energy.     

The role of vibronic interactions on intramolecular and intermolecular electron transfer in π-conjugated oligomers

The importance of electron-vibrational coupling for intermolecular and intramolecular electron-transfer processes is discussed on the basis of first-principles correlated quantum-mechanical calculations and of a dynamic vibronic approach. The methodology is illustrated for examples selected from some of our recent work. In all instances, the theoretical results are thoroughly compared to experimental data.