Magnetic Circular Dichroism of the Long‐Wavelength π‐π* Transitions in Nitrogen‐Containing Heteroconjugated Aromatic Compounds and in Selected Ruthenium Complexes

The long‐wavelength magnetic circular dichroism (MCD) spectra of some nitrogen‐containing heteroconjugated aromatic compounds have been recorded and interpreted on the basis of quantum‐chemical model calculations. In particular, the dependence of the MCD bands on the positions of the N‐atoms inside the aromatic rings and on substituents has been investigated. Some of the compounds considered form Ru²⁺ complexes. The influence of complexation on the long‐wavelength π‐π* bands of the ligands has also been recorded and discussed.     

Advantage of the N‐Alkylation Strategy for Retaining the Molecular Planarity for Oligothiophene/Imidazole/1,10‐Phenanthroline‐Based Heterocyclic Semiconducting and Fluorescent Compounds

A family of planar oligothiophene/imidazole/1,10‐phenanthroline (OTIP)‐based heterocyclic, aromatic, semiconducting, and fluorescent compounds with N‐substituted alkyl chains (allyl, n‐butyl, n‐octyl, n‐dodecyl, and n‐cetyl) have been designed and synthesized. They all have specific N‐coordination sites, various donor–acceptor spacers, good molecular planarity, suitable solubility, and high thermal stability. In comparison with conventional double β‐alkylation of the thiophene ring, our results reveal that the single imidazole N‐alkylation strategy for OTIPs has the advantage of maintaining the planarity of the whole molecule, in addition to improving the solubility, which can be clearly verified by the small dihedral angles between adjacent thiophene/imidazole/1,10‐phenanthroline (TIP) rings in eight X‐ray single‐crystal structures. In particular, n‐dodecyl‐ and n‐cetyl‐substituted OTIPs ( 7 and 8 ) with the same molecular length of 2.37 nm (M_W=939 and 1052), show good molecular planarity with the aforementioned dihedral angles of 8.9(5) and 10.4(5)°. Furthermore, special attention has been paid to the physicochemical properties of seven symmetrical OTIPs ( 6 – 8 , 13 – 15 , and 19 ), including two to six thiophene rings in the middle of their molecular structures. To the best of our knowledge, this is the first synthetic, structural, and spectral investigation into the N‐alkylation of OTIP‐based compounds.     

High‐Energy Long‐Lived Mixed Frenkel–Charge‐Transfer Excitons: From Double Stranded (AT)n to Natural DNA

The electronic excited states populated upon absorption of UV photons by DNA are extensively studied in relation to the UV‐induced damage to the genetic code. Here, we report a new unexpected relaxation pathway in adenine–thymine double‐stranded structures (AT)_n. Fluorescence measurements on (AT)_n hairpins (six and ten base pairs) and duplexes (20 and 2000 base pairs) reveal the existence of an emission band peaking at approximately 320 nm and decaying on the nanosecond time scale. Time‐dependent (TD)‐DFT calculations, performed for two base pairs and exploring various relaxation pathways, allow the assignment of this emission band to excited states resulting from mixing between Frenkel excitons and adenine‐to‐thymine charge‐transfer states. Emission from such high‐energy long‐lived mixed (HELM) states is in agreement with their fluorescence anisotropy (0.03), which is lower than that expected for π–π* states (≥0.1). An increase in the size of the system quenches π–π* fluorescence while enhancing HELM fluorescence. The latter process varies linearly with the hypochromism of the absorption spectra, both depending on the coupling between π–π* and charge‐transfer states. Subsequently, we identify the common features between the HELM states of (AT)_n structures with those reported previously for alternating (GC)_n: high emission energy, low fluorescence anisotropy, nanosecond lifetimes, and sensitivity to conformational disorder. These features are also detected for calf thymus DNA in which HELM states could evolve toward reactive π–π* states, giving rise to delayed fluorescence.     

低聚1,4-苯乙烯撑及其衍生物的结构和吸收光谱的理论研究

用B3LYP/6-31G对低聚物(PV)_n (PV＝1,4-phenylene vinylene, n＝2～8)和(PVSD)_n (PVSD＝2-(1,4-phenylene vinylene)-10-vinylene-spirocyclohexane-1,6-dibenzo[d,f](1,3)dioxepin, n＝1～4)体系进行了全优化并分析其结构特点, (PV)_n (n＝2～8)体系的结构中所有相邻C原子间形成的二面角均小于1°, 即所有原子有共面的趋势. 而在(PVSD)_n (n＝1～4)体系中低聚物的七元环处有较大的二面角, 约38°, 即在此处结构存在较大的扭曲. 这种扭曲结构对其光谱性质有较大的影响. 在优化结构的基础上分析了两系列低聚物的HOMO-LUMO能隙随n递增的变化规律和对光谱性质的影响, 推断高聚物的发光性质. 同时用ZINDO, TD-DFT方法计算这两系列低聚物的能隙和吸收光谱, 并将低聚物的这些性质与链长的倒数作图外推得到相应的高聚物的能带隙和吸收光谱最大吸收波长. 根据外推能带的曲线估算了聚合物的有效共轭链长. 结果说明, 在(PVSD)_n (n＝∞)中的扭曲结构特点导致其相对(PV)_n (n＝∞)的有效共轭链长变短, 能带隙变宽, 吸收光谱蓝移.     

Unusual pentagon and hexagon geometry of three isomers (no 1, 20, and 23) of fullerene C84

Three isomers 23 (D_2d), 1 (D₂), and 20 (T_d) of fullerene C₈₄ have been investigated by PM3, HF/6‐31G*, and DFT methods with B3LYP functional at the 6‐31G and 6‐31G* levels. In this article we reveal for the first time that some distortion of hexagon (pentagon), measured as its maximal dihedral angles, caused by local molecular strains may serve as a new criterion of stability of fullerenes with closed shell. © 2008 Wiley Periodicals, Inc. Int J Quantum Chem, 2008     

The Pt‐Organometallic Version of Perigraniline: Going Blue

Four conjugated push–pull organometallic polymers ( [Pt]‐AQ )_n ( [Pt] = trans‐bis(phenylacetylene)bis(tributylphosphine)platinum(II); AQ = 2‐bromo‐, 2,6‐dibromo‐, 2,6‐diamino‐, and unsubstituted anthraquinone diimine) were prepared and characterized by UV–vis spectroscopy and electrochemistry. A low‐energy charge transfer, CT, band ( [Pt] *→ AQ ; confirmed by density functional theory calculations), was found in the 445–500 nm window rather than the expected red‐shifted range above 630 nm. X‐ray structures of four model compounds reveal that steric hindrance induces large dihedral angles between the C₆H₄ and NCC₂ planes, rendering π‐orbital overlap difficult between the [Pt] and AQ units. The position of the CT band is mainly driven the reduction potential of the anthraquinone diimine unit.     

Dihedral‐Angle‐Controlled Crossover from Static Hole Delocalization to Dynamic Hopping in Biaryl Cation Radicals

In cases of coherent charge‐transfer mechanism in biaryl compounds the rates follow a squared cosine trend with varying dihedral angle. Herein we demonstrate using a series of biaryl cation radicals with varying dihedral angles that the hole stabilization shows two different regimes where the mechanism of the hole stabilization switches over from (static) delocalization over both aryl rings to (dynamic) hopping. The experimental data and DFT calculations of biaryls with different dihedral angles unequivocally support that a crossover from delocalization to hopping occurs at a unique dihedral angle where the electronic coupling (H _ab) is one half of reorganization (λ ), that is, H _ab=λ /2. The implication of this finding in non‐coherent charge‐transfer rates is being investigated.     

Magnetic circular dichroism studies of aromatic polymers

The magnetic circular dichroism (MCD) spectra of syndiotactic and isotactic polymers which contain aromatic chromophores have been found to be sensitive to configurational and conformational differences. For isotactic polymers it was determined that as the aromatic ring moved farther from the main chain the ration of B terms of the polymers to those of their model compounds reached a minimum but increased significantly when the aromatic ring was separated from the main chain by four atoms. This enhancement of MCD is believed to be caused by the alignment of the more flexible side chains which would allow the interaction of the aromatic rings with neighboring groups and could result in a favorable mixing of the ester electronic transition with the aromatic ¹A_1g?¹B_2u transition. This effect was not felt to any great extent by the syndiotactic polymers because the necessary nearest-neighbor interaction was sterically unfavorable. The ratio of the B terms of isotactic poly(phenyl methacrylate) to its model compound decreased as the polymer coil expanded, whereas it increased for the syndiotactic polymer. This effect reflects the different changes that the side chain interaction and orientations undergo in these polymers during coil expansion. The MCD ratios for iso- and syndiotactic poly(phenylethyl methacrylate) were not so sensitive during coil expansion. The ratio of the dipole strengths of the polymers and model compounds paralleled the MCD results, but the ultraviolet (UV) technique was less sensitive than MCD to subtle conformational differences. Poly(benzyl methacrylate) and benzyl pivalate were unsuitable systems for studying the MCD effect because the B terms of these materials approached zero.     

Crystal structures of functional building blocks derived from bis(benzo[b]thiophen‐2‐yl)methane

The syntheses of three bis(benzo[b]thiophen‐2‐yl)methane derivatives, namely bis(benzo[b]thiophen‐2‐yl)methanone, C₁₇H₁₀OS₂, (I), 1,1‐bis(benzo[b]thiophen‐2‐yl)‐3‐(trimethylsilyl)prop‐2‐yn‐1‐ol, C₂₂H₂₀OS₂Si, (II), and 1,1‐bis(benzo[b]thiophen‐2‐yl)prop‐2‐yn‐1‐ol, C₁₉H₁₂OS₂, (III), are described and their crystal structures discussed comparatively. The conformation of ketone (I) and the respective analogues are rather similar for most of the compounds compared. This is true for the interplanar angles, the C_aryl—C_bridge—C_aryl angles and the dihedral angles. The best resemblance is found for a bioisotere of (I), viz. 2,2′‐dinaphthyl ketone, (VII). By way of interest, the crystal packings also reveal similarities between (I) and (VII). In (I), the edge‐to‐face interactions seen between two napthyl residues in (VII) are substituted by S…π contacts between the benzo[b]thiophen‐2‐yl units in (I). In the structures of the bis(benzo[b]thiophen‐2‐yl)methanols, i.e. (II) and (III), the interplanar angles are also quite similar compared with analogues and related active pharmaceutical ingredients (APIs) containing the dithiophen‐2‐ylmethane scaffold, though the dihedral angles show a larger variability and produce unsymmetrical molecules.     

Evaluation of exchange‐correlation functionals in comparison to B3LYP for the description of silicon and Cu‐doped silicon clusters

Several developed exchange‐correlation functionals in density functional theory have been systematically applied to describe the geometries and electronic properties of small silicon (Si_n+1, n < 5) and doped silicon (CuSi_n) clusters. The performance of the various approaches is done with their critical comparison with B3LYP and available high level wave function methods. Our calculations indicate that all functional give reasonable results. Further, OLYP/6‐311+G* approach generally agrees with B3LYP results. The good performance of OLYP is of significant interest knowing that the hybrid functionals are computationally more demanding than nonhybrid schemes. So, we recommend OLYP/6‐311+G* approach for studying the doped silicon clusters and understanding the electronic properties of silicon by the presence of doped metal impurities. © 2007 Wiley Periodicals, Inc. Int J Quantum Chem, 2008     

Magnetic Circular Dichroism and Induced Circular Dichroism Spectra of N‐Bromophthalimide

The magnetic circular dichroism (MCD), induced circular dichroism (ICD) spectra, and the absorption spectra of N‐bromophthalimide have been measured. The ICD spectrum of the β‐cyclodextrin complex with N‐bromophthalimide is also reported. The absorption bands of N‐bromophthalimide are assigned.     

(E)‐3‐(Benzo[b]thiophen‐2‐yl)‐2‐(3,4,5‐trimethoxyphenyl)acrylonitrile and (Z)‐3‐(benzo[b]thiophen‐2‐yl)‐2‐(3,4‐dimethoxyphenyl)acrylonitrile

The title compounds, C₂₀H₁₇NO₃S, (I), and C₁₉H₁₅NO₂S, (II), were prepared by the reaction of benzo[b]thiophene‐2‐carbaldehyde with (3,4,5‐trimethoxyphenyl)acetonitrile and (3,4‐dimethoxyphenyl)acetonitrile, respectively, in the presence of methanolic potassium hydroxide. In (I), the C=C bond linking the benzo[b]thiophene and the 3,4,5‐trimethoxyphenyl units has E geometry, with dihedral angles between the plane of the bridging unit and the planes of the two adjacent ring systems of 5.2 (3) and 13.1 (2)°, respectively. However, in (II), the C=C bond has Z geometry, with dihedral angles between the plane of the bridging unit and the planes of the adjacent benzo[b]thiophene and 3,4‐dimethoxyphenyl units of 4.84 (17) and 76.09 (7)°, respectively. There are no significant intermolecular hydrogen‐bonding interactions in the packing of (I) and (II). The packing is essentially stabilized via van der Waals forces.     

Synthesis of New Chlorin e6 Trimethyl and Protoporphyrin IX Dimethyl Ester Derivatives and Their Photophysical and Electrochemical Characterizations

In view of increasing demands for efficient photosensitizers for photodynamic therapy (PDT), we herein report the synthesis and photophysical characterizations of new chlorin e₆ trimethyl ester and protoporphyrin IX dimethyl ester dyads as free bases and Zn^II complexes. The synthesis of these molecules linked at the β‐pyrrolic positions to pyrano[3,2‐c]coumarin, pyrano[3,2‐c]quinolinone, and pyrano[3,2‐c]naphthoquinone moieties was performed by using the domino Knoevenagel hetero Diels–Alder reaction. The α‐methylenechromanes, α‐methylenequinoline, and ortho‐quinone methides were generated in situ from a Knoevenagel reaction of 4‐hydroxycoumarin, 4‐hydroxy‐6‐methylcoumarin, 4‐hydroxy‐N‐methylquinolinone, and 2‐hydroxy‐1,4‐naphthoquinone, respectively, with paraformaldehyde in dioxane. All the dyads as free bases and as Zn^II complexes were obtained in high yields. All new compounds were fully characterized by 1D and 2D NMR techniques, UV/Vis spectroscopy, and HRMS. Their photophysical properties were evaluated by measuring the fluorescence quantum yield, the singlet oxygen quantum yield by luminescence detection, and also the triplet lifetimes were correlated by flash photolysis and intersystem crossing (ISC) rates. The fluorescence lifetimes were measured by a time‐correlated single photon count (TCSPC) method, fluorescence decay associated spectra (FDAS), and anisotropy measurements. Magnetic circular dichroism (MCD) and circular dichroism (CD) spectra were recorded for one Zn^II complex in order to obtain information, respectively, on the electronic and conformational states, and interpretation of these spectra was enhanced by molecular orbital (MO) calculations. Electrochemical studies of the Zn^II complexes were also carried out to gain insights into their behavior for such applications.     

β‐Carotene Revisited by Transient Absorption and Stimulated Raman Spectroscopy

β‐Carotene in n‐hexane was examined by femtosecond transient absorption and stimulated Raman spectroscopy. Electronic change is separated from vibrational relaxation with the help of band integrals. Overlaid on the decay of S₁ excited‐state absorption, a picosecond process is found that is absent when the C₉‐methyl group is replaced by ethyl or isopropyl. It is attributed to reorganization on the S₁ potential energy surface, involving dihedral angles between C₆ and C₉. In Raman studies, electronic states S₂ or S₁ were selected through resonance conditions. We observe a broad vibrational band at 1770 cm^?1 in S₂ already. With 200 fs it decays and transforms into the well‐known S₁ Raman line for an asymmetric C=C stretching mode. Low‐frequency activity (<800 cm^?1) in S₂ and S₁ is also seen. A dependence of solvent lines on solute dynamics implies intermolecular coupling between β‐carotene and nearby n‐hexane molecules.     

Topology Switching in [32]Heptaphyrins Controlled by Solvent,Protonation, and meso Substituents

The switching of topology between “figure‐eight”, Möbius, and untwisted conformations in [32]heptaphyrins(1.1.1.1.1.1.1) has been investigated by using density functional theory calculations. Such a change is achieved by variation of one internal dihedral angle and, if properly controlled, can provide access to molecular switches with unique optical and magnetic properties. In this work, we have explored different conformational control methods, such as solvent, protonation and meso substituents. Despite its antiaromatic character, most of the [32]heptaphyrins (R=H, CH₃, CF₃, Ph, C₆F₅) adopt a figure‐eight conformation in the neutral state, owing to their more‐effective hydrogen‐bonding interactions. The aromatic Möbius topology is only preferred with dichlorophenyl groups, which minimize the steric hindrance that arises from the bulky chlorine atoms. The conformational equilibrium is sensitive to the solvent, so polar solvents, such as DMSO, further stabilize the Möbius conformation. Protonation induces a conformational change into the Möbius topology, irrespective of the meso‐aryl groups. In the triprotonated species, the conformational switch is blocked and a non‐twisted conformer becomes much more stable than the figure‐eight conformation. We have shown that the relative energies of the protonated [32]heptaphyrins are dominated by aromaticity. Importantly, this topology switching induces a dramatic change in the magnetic properties and reactivity of the macrocycles, as revealed by several energetic, magnetic, structural, and reactivity indices of aromaticity.     

Crystal structure of a liquid crystal non‐symmetric dimer: cholesteryl 4‐[4‐(4‐n‐butylphenylethynyl)phenoxy]butanoate

The crystal structure of cholesteryl 4‐[4‐(4‐n‐butylphenylethynyl)phenoxy]butanoate [phase sequence: Cr 155°C (46.1?J?g^?1) SmA 186.8°C (1.5?J?g^?1) TGB‐N* 204.7 (6?J?g^?1) I] has been solved from single crystal X‐ray diffraction data. The compound crystallizes in the monoclinic space group P2₁ with unit cell parameters: a?=?13.129(2), b?=?9.3904(10), c?=?17.4121(8)?Å, β?=?92.790(7)°, Z?=?2. The structure has been solved by direct methods and refined to R?=?0.0606 for 3?250 observed reflections. The bond distances and angles are in good agreement with the corresponding values for compounds containing phenyl and cholesterol moieties. The phenyl rings A and B are planar. The dihedral angle between the least‐squares planes of the two phenyl rings is 28°. The cholesterol moiety has the usual structure: the C and E rings have chair conformations, and the D and F rings adopt half‐chair conformations. The molecules in the unit cell are arranged in an antiparallel manner. The crystal structure is stabilized by an intermolecular C–H…O contact of 2.989(10)?Å.     

Spin–Orbit Coupling in Phosphorescent Iridium(III) Complexes

We study the excited states of two iridium(III) complexes with potential applications in organic light‐emitting diodes: fac‐tris(2‐phenylpyridyl)iridium(III) [Ir(ppy)₃] and fac‐tris(1‐methyl‐5‐phenyl‐3‐n‐propyl‐[1,2,4]triazolyl)iridium(III) [Ir(ptz)₃]. Herein we report calculations of the excited states of these complexes from time‐dependent density functional theory (TDDFT) with the zeroth‐order regular approximation (ZORA). We show that results from the one‐component formulation of ZORA, with spin–orbit coupling included perturbatively, accurately reproduce both the results of the two‐component calculations and previously published experimental absorption spectra of the complexes. We are able to trace the effects of both scalar relativistic correction and spin–orbit coupling on the low‐energy excitations and radiative lifetimes of these complexes. In particular, we show that there is an indirect relativistic stabilisation of the metal‐to‐ligand charge transfer (MLCT) states. This is important because it means that indirect relativistic effects increase the degree to which SOC can hybridise singlet and triplet states and hence plays an important role in determining the optical properties of these complexes. We find that these two compounds are remarkably similar in these respects, despite Ir(ppy)₃ and Ir(ptz)₃ emitting green and blue light respectively. However, we predict that these two complexes will show marked differences in their magnetic circular dichroism (MCD) spectra.     

Conformational analysis of thiopeptides: (ϕ,ψ) maps of thio‐substituted dipeptides

Noncoded amino acids such as isobutyric acid have been used extensively in the process of drug design and protein engineering. This article focuses on a noncoded amino acid where the oxygen in the peptide unit is replaced with a sp² sulfur. It was hypothesized that the conformational space as well as the conformational preferences of thiopeptides will be more restricted and altered by the bulkier atom with different electrostatic properties. In vacuo conformational minima as well as associated energies for the thio‐substituted alanine dipeptides were calculated at the ab initio HF/6‐31G* level. When the bulkier sulfur atom acts as a hydrogen bond acceptor in the C₅ conformation or in the C$^{\mathrm{axial}}_{7}$ and C$^{\mathrm{equatorial}}_{7}$ conformations, the hydrogen bond lengths are much longer than that of normal peptides. Consequently, the ?, ψ dihedral angles of the C₅, C$^{\mathrm{axial}}_{7}$, and C$^{\mathrm{equatorial}}_{7}$ conformations change to accommodate the longer hydrogen bonds. The thiopeptide group is a poorer hydrogen bond acceptor and a better hydrogen bond donor than the normal peptide group. Therefore, thio‐substitution at the amino terminal leads to disfavoring of the C₇ conformations relative to the C₅ conformations and thio‐substitution at the carboxyl terminal leads to favoring of the C₇ conformations relative to the C₅ conformation. To simulate the conformations in solution, (?,ψ) conformational energy maps were calculated for the glycine and alanine dipeptides at various dielectric constants using the CFF91 force field with our previously derived parameters for the thioamide group. The results show that thio‐substitution does restrict the conformations available to amino acids residues in peptides. Thio substitution at the amino terminal introduces unfavorable interactions near ?=?120 and 120, where there are increased overlaps between S_n?1?H_β, and S_n?1?C_β atoms, respectively. Thio substitution at the carboxyl terminal restricts the conformations near ψ=60, ?60, and 180, which correspond with increase overlaps between S_n?C_β, S_n?H_β′ and S_n?N_n atoms, respectively. The effects of dithio substitutions of either the alanine or the glycine dipeptides are similar to the combined effects of the two single thio substitutions. © 2001 John Wiley & Sons, Inc. J Comput Chem 22: 1026–1037, 2001     

Circularly Polarized Luminescence from Axially Chiral BODIPY DYEmers: An Experimental and Computational Study

With our new home‐built circularly polarized luminescence (CPL) instrument, we measured fluorescence and CPL spectra of the enantiomeric pairs of two quasi‐isomeric BODIPY DYEmers 1 and 2 , endowed with axial chirality. The electronic circular dichroism (ECD) and CPL spectra of these atropisomeric dimers are dominated by the exciton coupling between the main π–π* transitions (550–560 nm) of the two BODIPY rings. Compound 1 has strong ECD and CPL spectra (g_lum=4×10^?3) well reproduced by TD‐DFT and SCS‐CC2 (spin‐component scaled second‐order approximate coupled‐cluster) calculations using DFT‐optimized ground‐ and excited‐state structures. Compound 2 has weaker ECD and CPL spectra (g_lum=4×10^?4), partly due to the mutual cancellation of electric–electric and electric–magnetic exciton couplings, and partly to its conformational freedom. This compound is computationally very challenging. Starting from the optimized excited‐state geometries, we predicted the wrong sign for the CPL band of 2 using TD‐DFT with the most recommended hybrid and range‐separated functionals, whereas SCS‐CC2 or a DFT functional with full exact exchange provided the correct sign.