A quantum-mechanical study of the interaction of methylglyoxal with guanine

Ab initio self-consistent field molecular orbital computations on the relative stabilities of the different possible intermediate adducts for the reactions between methylglyoxal and guanine, as well as the evaluation of the relative stabilities of the two different possible final cyclic products (IIIb and IIIc) point all to the conclusion that it is the addition product in which the methyl group is close to the amino nitrogen which is the most stable one.     

Configuration interaction methods for improving unrestricted Hartree-Fock spin densities

Limited Configuration Interaction wave functions based on Unrestricted Hartree-Fock natural orbitals are found to be easy to compute and to give much more satisfactory spin densities than are provided by techniques currently in use.     

Band structure of nonclassical polymers

It is shown that fully conjugated alternant nonclassical polymers are comparatively stable systems as a result of the considerable delocalisation energy.The energy characteristics of the polymers are strongly determined by the electron spin distribution of the degenerate nonbonding molecular orbitals; the full spin configuration,S>0, is favoured. The spin densities depend on the electron correlation and alternate; this corresponds to a ferrimagnetic state of the polymer at 0°K.     

A non-empirical molecular orbital study on the relative stabilities of adenine and guanine tautomers

The relative stabilities of a series of adenine and guanine tautomers have been calculated using anab initio Hartree-Fock-Roothaan SCF MO method. The calculated relative stabilities agree in general with the results of earlier semiempirical studies. According to the present study, tautomeric forms with regular Kekulé structure for the six-membered purine ring are the most stable. The amine-imine tautomerization of purine bases is not likely to be responsible for spontaneous mutations in DNA.     

Multiplicity of the ground state of large alternant organic molecules with conjugated bonds

The multiplicity and the full spin of the ground state of large alternate molecules with conjugated bonds are considered. It is strictly shown that if the numbers of starred and unstarred atoms (say, carbon) differ from each other the full spin of the molecule is more than zero. Some possible planar and linear molecules having the full spin to be proportional to their sizes are presented. Particularly, they would be ferromagnets at infinite sizes.     

Theoretical approach of the conformations of benzylidene aniline using the PCILO method

The conformational properties of benzylidene aniline (BA) were investigated using the PCILO method. Evidence has been provided that the optimization of geometry plays a prominent part, in agreement with recent experimental work on photoelectron spectroscopy by Haselbach.     

Theoretical assignments of the electronic spectrum of acetylene

Non empirical calculations of energies and properties of some excited states of acetylene are presented. A frozen core approximation is used and excitations to , and MO's are taken into account. Both valence and Rydberg states are considered. Assignments of the UV and electron impact spectra are proposed and some questions are raised.     

Band structure of even and ions of odd polyenes

The analysis of experimental data for singlet transitions (E _n) of even polyenes (I), cations (II) and anions (III) of odd polyenes show that for infinite chains E (I)/E (II)=E (I)/E (III) = 2:1. It is shown that the energy gap is equal for the three systems. In cases (II) and (III) there is a level (NBMO) in the gap which is vacant in (II) and occupied in (III). That is why the first optical transition in (II) and (III) depends on the semiwidth of the gap.     

Acidity scale for strong Bronsted acids referred to their complexes with water and in the Gaseous phase

CNDO/2 calculations on AH...B complexes in the gaseous phase (AH = strong acids, B = water) gives the following order H₂O < HF < HCl < HSO₃CF₃ < H₂SO₄ < HSO₃F < HClO₄ < H₃O⁺ if we take as reference the Wiberg residual indexp(H... O). Other properties and in particular the charge transfer behave in the same fashion. Charge variations for each atom give an explanation for the Pauling rule for the oxygenated acids.

     

Topological properties of benzenoid systems

The sextet polynomial of non-branched cata-condensed benzenoid molecules is proved to be related (Eq. (3)) to the characteristic polynomial of a tree.     

Chemical applications of group theory and topology

The following procedure is described for investigating the qualitative dynamics of simple chemical systems: 1) A so-called influence diagram is generated representing the relationships between the reference reactants (phase-determining intermediates); 2) This influence diagram is used to generate a truth table indicating possible transitions between state vectors representing the signs of the time derivatives of of the reference reactant concentrations; 3) The truth table is used to determine a state transition diagram representing the flow topology around unstable equilibrium points; 4) The characteristic equation of the adjacency matrix of the influence diagram is solved in order to determine the presence of such unstable equilibrium points. The two types of qualitative dynamics possible for chemical systems containing two reference reactants and one feedback circuit are bifurcation between two attracting regions (bistability) and limit cycle oscillation. However, in two reference reactant systems oscillation requires an additional self-activating loop to generate the unstable equilibrium point required for its realization. Bistability and limit cycle oscillation are also two of the possible types of qualitative dynamics for chemical systems containing three reference reactants. However, chemical systems with three reference reactants and two or more feedback circuits can also contain interlocking limit cycles, which can lead to toroidal oscillations or chaos. The influence diagrams are given for the systems exhibiting these various types of dynamic behavior along with a summary of the important properties of all 729 possible influences for simple chemical systems containing three reference reactants.     

Die diamagnetische Suszeptibilität eines nicht kugelsymmetrischen Systems

The diamagnetic susceptibility of the ground state of a non-spherosymmetric system is calculated, and the eigenfunction used is the exact solution of the problem and can be written in a compact form.

Herrn Professor Dr. F. Hund in Verehrung zum achtzigsten Geburtstag gewidmet.     

The molecular electrostatic potentials of the complementary base pairs of DNA

The perturbations in the molecular electrostatic potentials of the bases of the nucleic acids, brought about by hydrogen-bonding into complementary pairs are evaluated by a superposition procedure.     

A theoretical study of electrophilic reactions

The electronic structures of protonated formyl and acetylium cations and their deprotonation paths leading to HCO⁺, COH⁺ and CH₃CO⁺have been studied by means of ab initio calculations. The results support Olah's theory that dipositive species can be the de facto reagents in electrophilic reactions.     

Ab initio study of hydrazoic acid

SCF and CI calculations were carried out on the ground^1A state of HN₃. The equilibrium geometry and vibration frequencies were computed. The results point to a planar structure (groupC _s) but to a non-linear (170 °) N-N-N conformation. The calculated vibration frequencies are in fair agreement with experimental assignments.The dissociation path of the molecule to NH and N₂ products was investigated and compared to the isoelectronic reaction of diazomethane. The dissociation energy of hydrazoic acid is estimated to be about –8 kcal/mole, with a potential barrier to dissociation of about 30 kcal/mole.Boursier IRSIA     

Structure and properties of non-classical polymers II. Band structure and spin densities

Theoretical investigation of the band structure of three types of nonclassical polymers, namely alternant (one- and two-dimensional), nonalternant and heteroatomic, are carried out. Although polyradicals, these polymers have a considerable delocalization energy which may determine their relative stability.The spin-density distribution of the alternant type of non-classical polymers corresponds to a ferrimagnetic ground state at 0 K.The non-classical polymers represent a new class of organic systems as their band structure and magnetic properties essentially differ from those of common polymers.     

Conformation analysis of formic acid. Extended basis set SCF and CEPA calculations

SCF computations using extended DZP and TZP basis sets have been performed to determine the structure of syn and anti formic acid and the transition state for rotation of the OH group. Effects of electron correlation were accounted for by means of CEPA calculations which predict the anti conformer to be 5 kcal/mol and the transition state 14.7 kcal/mol higher in energy than the syn conformer, with probable error estimates of 0.7 kcal/mol and 2 kcal/mol respectively.     

On the use of pseudopotentials in molecular calculations

A series of tests was performed of the Kahn-Goddard-Melius-Topiol pseudopotentials in view of their utilization with small contracted basis sets in molecular computations. The effects of inner-shell separability and of basis set contraction are underlined. The utilizability of Topiol's valence least-squares fitted Gaussian basis sets is studied.     

Ab initio calculation of some low-lying electronic excited states of methane

The energies of some low-lying electronic excited states of methane are calculated by using wave functions built up in terms of plane waves modulated by multicenter Gaussian factors. The wave functions of the various states are evaluated by a two steps iterative process. In the first step, each excited orbital is determined while keeping all other rigid; in the second, rearrangement effects are introduced. Final results are in good agreement with experimental data and allow to enhance an assignement hypothesis for the first electronic transitions.