Preferential solvation of lysozyme by dimethyl sulfoxide in binary solutions of water and dimethyl sulfoxide

To reveal the denaturation mechanism of lysozyme by dimethyl sulfoxide (DMSO), thermal stability of lysozyme and its preferential solvation by DMSO in binary solutions of water and DMSO was studied by differential scanning calorimetry (DSC) and using densities of ternary solutions of water (1), DMSO (2) and lysozyme (3) at 298.15 K. A significant endothermic peak was observed in binary solutions of water and DMSO except for a solution with a mole fraction of DMSO (x ₂) of 0.4. As x ₂ was increased, the thermal denaturation temperature T _m decreased, but significant increases in changes in enthalpy and heat capacity for denaturation, ΔH _cal and ΔC _p, were observed at low x ₂ before decreasing. The obtained amount of preferential solvation of lysozyme by DMSO (∂g ₂/∂g ₃) was about 0.09 g g⁻¹ at low x ₂, indicating that DMSO molecules preferentially solvate lysozyme at low x ₂. In solutions with high x ₂, the amount of preferential solvation (∂g ₂/∂g ₃) decreased to negative values when lysozyme was denatured. These results indicated that DMSO molecules do not interact directly with lysozyme as denaturants such as guanidine hydrochloride and urea do. The DMSO molecules interact indirectly with lysozyme leading to denaturation, probably due to a strong interaction between water and DMSO molecules.     

Water effect on the gelation behavior of polyacrylonitrile/dimethyl sulfoxide solution

The gelation behavior of polyacrylonitrile (PAN)/dimethyl sulfoxide (DMSO) solution containing different amounts of water has been investigated using various methods. The ternary phase diagram of PAN/DMSO/water system indicated that water enhanced the temperature at which phase separation of PAN/DMSO solution occurred. Intrinsic viscosities [η] of dilute PAN/DMSO solution and PAN/DMSO/water solution at varied temperatures were measured to examine the influence of water on the phase behavior of PAN/DMSO solution. The presence of water in the solution gave rise to elevated critical temperature T_c. The gelation temperature T_g obtained by measuring the loss tangent tan δ at different oscillation frequencies in a cooling process was found to increase with increased water content in the solution. The critical relaxation exponent n value, however, changed little with varied concentration. During the aging process, the gelation rate of PAN/DMSO solution increases with the water level. The n values of the PAN/DMSO solutions with 2 wt% and 4 wt% water were a little larger than that of the solution without water, which may be explained by the turbid gel resulted from phase separation. The n values obtained in the aging process were larger than those obtained in the cooling process for the same three solutions, ascribed to the weaker gel with less cross-linking points formed in long time. Water led to the formation of denser gel structure. The coarser gel surface can also be attributed to the phase separation promoted by water.     

Solvation and dynamic behavior of cyclodextrins in dimethyl sulfoxide solution

High-frequency dielectric relaxation behavior up to 20 GHz was investigated for plain (alpha, beta, gamma) and (62 and 100%) methylated cyclodextrins, CDs, in dimethyl sulfoxide, DMSO, solution. Each hydrogen atom of OH groups of the CDs solvated a DMSO molecule for a residence time of 130-180 ps due to the hydrogen bond formation to an oxygen atom of DMSO, and a few DMSO molecules were included in cavities of the CDs for a while similar to the residence time. The overall rotational relaxation modes of solvated CDs were also observed depending on the effective sizes of the solvated CDs.     

Effect of dimethyl sulfoxide on the electron transfer reactivity of hemoglobin

Hemoglobin, after being treated with dimethyl sulfoxide, exhibits a direct electrochemical response at a pyrolytic graphite electrode. The apparent standard potential (E degrees ') of hemoglobin is -0.119 V (vs. NHE). Meanwhile, since no electrochemical mediator is required for its direct electrochemistry, this work provides a convenient way to perform electrochemical research on this protein.     

Protein phase behavior and crystallization: effect of glycerol

Glycerol is widely used as an additive to stabilize proteins in aqueous solution. We have studied the effect of up to 40 wt % glycerol on the crystallization of lysozyme from brine. As the glycerol concentration increased, progressively larger amounts of salt were needed to crystallize the protein. Like previous authors, we interpret this as evidence for glycerol changing the interaction between lysozyme molecules. We quantitatively model the interprotein interaction using a Derjaguin-Landau-Verwey-Overbeek potential. We find that the effect of glycerol can be entirely accounted for by the way it modifies the dielectric constant and refractive index of the solvent. Quantifying the interprotein interaction by the second virial coefficient, B(2), we find a universal crystallization boundary for all glycerol concentrations.     

Effect of dimethyl sulfoxide on electrochemical and antiradical properties of ascorbic acid

Solvent effect of dimethyl sulfoxide (DMSO) on the oxidation-reduction properties of ascorbic acid (AA) was studied by the electroanalytical method of differential pulse voltammetry (DPV) in a three-electrode cell at 37 °C. Dimethylsulfoxide was found to considerably decrease the oxidation ability of AA due to the formation of molecular complexes between AA and DMSO through the intermolecular hydrogen bonds and shift the anodic peak potential toward the positive values, with its intensity being decreased. Kinetic spectrophotometric measurements in the UV-vis regions of the reaction of the stable free radical 2,2-diphenyl-1-picrylhydrazyl (DPPH^·) with AA confirmed the stabilizing effect of the Lewis base DMSO on the reactivity of the neutral form of AA and its intermediates with respect to DPPH^·. The mechanism of oxidation of AA with the radical DPPH· in the presence of DMSO was considered.     

Viscoelastic behavior of polyacrylonitrile/dimethyl sulfoxide concentrated solution with water

The spinnability and polydispersity of polyacrylonitrile/dimethyl sulfoxide (PAN/DMSO)/H₂O spinning solutions with conventional PAN molecular weight and comparative high PAN concentration have been investigated using a cone‐plate rheometer. It is observed from the measurements that, the viscosities of the solutions decreased with the rising of shear rate, and then stabilized to almost the same value, regardless of the PAN concentration. The chain orientation in the fiber formed under constant shear rate cannot be changed considerably even after long relaxation of more than 900s. For dynamic experiments, a steady increase of both G′ and G″ with escalating oscillation frequency was seen for all samples. Higher viscous‐elastic modulus at higher H₂O content was found, too. It is also concluded from the log G′ ? log G″ plot and the gel point that the PAN/DMSO/H₂O system with regular PAN molecular weight behaves very close to a mono‐disperse system, thus very suitable for gel spinning and for preparation of high performance PAN precursor fiber. © 2009 Wiley Periodicals, Inc. J Polym Sci Part B: Polym Phys 47: 1437–1442, 2009     

Variational transition-state theory study of the dimethyl sulfoxide (DMSO) and OH reaction

The mechanism for the atmospheric oxidation of DMSO has been studied. For the first time, all the possible channels in the DMSO + OH reaction are studied together theoretically, and their corresponding rate constants have been evaluated under the variational transition-state formalism. Three different channels have been characterized: an addition-elimination process to form MSIA (CH3SOOH) and CH3, a H-abstraction pathway to give CH3SOCH2 and H2O, and a nonkinetically relevant S(N)2-type reaction to form methanol and CH3SO. In agreement with previous experimental and theoretical works, the main product in the DMSO + OH reaction turns out to be the MSIA, with a branching ratio at 298.15 K around 97%. The effects of pressure in the global rate constant have also been analyzed.     

Reconsideration of the anomalous dielectric behavior of dimethyl sulfoxide in the pure liquid state

Although many vibrational spectroscopic studies using infrared absorption and Raman scattering techniques reveal that dimethyl sulfoxide (DMSO) forms intermolecular associations, such as dimers, in the pure liquid state, the results of many dielectric relaxation studies deny the presence of such associations and claim very little orientational correlation between the dipoles of DMSO molecules because of a Kirkwood correlation factor close to unity in the pure liquid state and in solution. Recently, we found reasons for the inconsistency and elucidated the presence of dimeric DMSO associations via dielectric relaxation measurements from 50 MHz to 50 GHz. The dissociation of DMSO dimers is the major dielectric relaxation process with a relaxation time of 19 ps, while the relaxation of monomeric DMSO is a minor mode with a relaxation time of 4.5 ps at 25 °C and slightly increasing strength with increasing temperature.     

Construction of a dimethyl sulfoxide sensor based on dimethyl sulfoxide reductase immobilized on a au film electrode.

A novel dimethyl sulfoxide (DMSO) sensor using DMSO reductase and film electrodes was constructed. The Au and Ag electrodes were fabricated on slide glass by vacuum deposition and the application of a photolithographic technique. The micro-chamber (4 x 50 x 1 mm, volume 200 microl) was fabricated on a poly(dimethylsiloxane) (PDMS) polymer. The Pt electrode was implanted in a PDMS polymer. DMSO reductase was immobilized on a Au film electrode with bovine serum albumin (BSA)-glutaraldehyde. This sensor could determine DMSO in an unpurged aqueous solution with glucose oxidase (GOD) and catalase (CAT) for oxygen removal. The DMSO sensor showed a linear response within 1 mM DMSO with a correlation coefficient of 0.999. The detection limit was 200 microM (3sigma), and the sensitivity was 23.8 mA M(-1) cm(-2). The relative standard deviations at each concentration were within 3.6%.     

Enthalpic effect of polyacrylonitrile on the concentrated solutions in dimethyl sulfoxide: Strong thixotropic behavior and formation of bound solvents

The effect of dipole–dipole interaction by nitrile groups of PAN on the bound state of solvent molecules and the concentrated solution properties in DMSO was investigated. Variation of a solution viscosity exhibited three overlap concentrations, C1*, C2*, and C3*, at 2.7, 8.6, and 16.3 wt%, respectively, representing the transition of concentration regions in the order of dilute, unentangled‐semi dilute, entangled‐semi dilute, and concentrated regions. The two‐dimensional mapping of FT‐IR analysis and dielectric measurement confirmed that the intermolecular interaction of PAN was suddenly enhanced at the C*s, inducing polarization to DMSO. In the ice‐melting process of PAN solutions, two different melting peaks (T_m2 and T_m3) of DMSO newly appeared at each C2* and C3*, suggesting the different types of bound solvents. In the concentrated solutions, the saturated dielectric constant and the strongly delayed evaporation of the solvent even at the boiling point of DMSO along with strong thixotropic behavior were indicative of the stronger confinement state of bound DMSO than in the semidilute solutions. © 2019 Wiley Periodicals, Inc. J. Polym. Sci., Part B: Polym. Phys. 2019 , 57, 1080–1089     

Pressure-driven phase transitions in NaBH4: theory and experiments

We have investigated pressure-induced structural transitions in NaBH4 through density-functional theory calculations combined with X-ray and neutron diffraction experiments. Our calculations confirm that the cubic phase is stable up to 5.4 GPa and an orthorhombic phase occurs above 8.9 GPa, as observed in X-ray diffraction experiments. Both the calculations and X-ray diffraction measurements identify an intermediate tetragonal phase that appears between 6 and 8 GPa; that is, between the cubic and orthorhombic phases. This result is also confirmed by high-pressure neutron diffraction experiments performed on NaBD4. Our calculations and X-ray diffraction measurements show that the space group of the orthorhombic phase above 8.9 GPa is Pnma and the orthorhombic phase remains stable up to 30 GPa. The calculated equations of state are in excellent agreement with experiments.     

Theoretical study on the gas phase reaction of dimethyl sulfoxide with atomic chlorine in the presence of water

We have investigated theoretically the gas phase reactions of dimethyl sulfoxide (DMSO) with atom Cl in the absence and presence of a single water molecule. The calculations of the potential energy surfaces in the water-free and water-assisted along the different channels are performed at the CCSD(T)/6-311++G(2df,2p)//MP2/6-31G(d) level. The calculated results show that energy barriers of the H_c-abstraction reaction are reduced due to one water molecule added. The computed rate constants of H_c-abstraction reaction indicate that the reaction with water is faster than the value of the naked reaction. However, H_a-abstraction reaction, path2, path3, and path4 are slower without water than hydrous channels.     

Kinetics, mechanism, and thermochemistry of the gas phase reaction of atomic chlorine with dimethyl sulfoxide

A laser flash photolysis-resonance fluorescence technique has been employed to study the kinetics of the reaction of chlorine atoms with dimethyl sulfoxide (CH3S(O)CH3; DMSO) as a function of temperature (270-571 K) and pressure (5-500 Torr) in nitrogen bath gas. At T = 296 K and P > or = 5 Torr, measured rate coefficients increase with increasing pressure. Combining our data with literature values for low-pressure rate coefficients (0.5-3 Torr He) leads to a rate coefficient for the pressure independent H-transfer channel of k1a = 1.45 x 10(-11) cm3 molecule(-1) s(-1) and the following falloff parameters for the pressure-dependent addition channel in N2 bath gas: k(1b,0) = 2.53 x 10(-28) cm6 molecule(-2) s(-1); k(1b,infinity) = 1.17 x 10(-10) cm3 molecule(-1) s(-1), F(c) = 0.503. At the 95% confidence level, both k1a and k1b(P) have estimated accuracies of +/-30%. At T > 430 K, where adduct decomposition is fast enough that only the H-transfer pathway is important, measured rate coefficients are independent of pressure (30-100 Torr N2) and increase with increasing temperature. The following Arrhenius expression adequately describes the temperature dependence of the rate coefficients measured at over the range 438-571 K: k1a = (4.6 +/- 0.4) x 10(-11) exp[-(472 +/- 40)/T) cm3 molecule(-1) s(-1) (uncertainties are 2sigma, precision only). When our data at T > 430 K are combined with values for k1a at temperatures of 273-335 K that are obtained by correcting reported low-pressure rate coefficients from discharge flow studies to remove the contribution from the pressure-dependent channel, the following modified Arrhenius expression best describes the derived temperature dependence: k1a = 1.34 x 10(-15)T(1.40) exp(+383/T) cm3 molecule(-1) s(-1) (273 K < or = T < or = 571 K). At temperatures around 330 K, reversible addition is observed, thus allowing equilibrium constants for Cl-DMSO formation and dissociation to be determined. A third-law analysis of the equilibrium data using structural information obtained from electronic structure calculations leads to the following thermochemical parameters for the association reaction: delta(r)H(o)298 = -72.8 +/- 2.9 kJ mol(-1), deltaH(o)0 = -71.5 +/- 3.3 kJ mol(-1), and delta(r)S(o)298 = -110.6 +/- 4.0 J K(-1) mol(-1). In conjunction with standard enthalpies of formation of Cl and DMSO taken from the literature, the above values for delta(r)H(o) lead to the following values for the standard enthalpy of formation of Cl-DMSO: delta(f)H(o)298 = -102.7 +/- 4.9 kJ mol(-1) and delta(r)H(o)0 = -84.4 +/- 5.8 kJ mol(-1). Uncertainties in the above thermochemical parameters represent estimated accuracy at the 95% confidence level. In agreement with one published theoretical study, electronic structure calculations using density functional theory and G3B3 theory reproduce the experimental adduct bond strength quite well.     

Investigations on the structure of dimethyl sulfoxide and acetone in aqueous solution

Aqueous solutions of dimethyl sulfoxide (DMSO) and acetone have been investigated using neutron diffraction augmented with isotopic substitution and empirical potential structure refinement computer simulations. Each solute has been measured at two concentrations-1:20 and 1:2 solute:water mole ratios. At both concentrations for each solute, the tetrahedral hydrogen bonding network of water is largely unperturbed, though the total water molecule coordination number is reduced in the higher 1:2 concentrations. With higher concentrations of acetone, water tends to segregate into clusters, while in higher concentrations of DMSO the present study reconfirms that the structure of the liquid is dominated by DMSO-water interactions. This result may have implications for the highly nonideal behavior observed in the thermodynamic functions for 1:2 DMSO-water solutions.     

Effect of base nature on the oxidation of dimethyl sulfoxide with hydrogen peroxide in superbasic media

Kinetic relationships of the dimethyl sulfoxide oxidation to dimethyl sulfone with hydrogen peroxide in the presence of an alkali (MOH) or sodium tert-butoxide were investigated. Kinetic parameters of the process were calculated. The process was found to proceed through the intermediate formation of the alkaline salts MeOOH. The effect of the base nature on the stage of salt formation and oxidation was revealed.     

Thermal analytical study on coordination in tetramethylene sulfoxide and dimethyl sulfoxide complexes of tervalent lanthanoid perchlorates

TG-DTA analyses of [Ln(tmso)₈](ClO₄)₃(Ln=tervalent ions of the lanthanoid series; tmso=tetramethylene sulfoxide) were carried out in a nitrogen atmosphere and under vacuum. The observed values of the characteristic temperatures show systematic changes along the series, owing to the affects of the “lanthanoid contraction”. The corresponding dimethyl sulfoxide complexes were also investigated by the same method.