Synthesis,crystal structure and other properties of the complexes of Er(III), Yb(III) and Lu(III) with 4,4′-bipyridine and dichloroacetates

A novel mixed-ligand complexes of Er(III), Yb(III) and Lu(III) with title ligands were prepared and characterized by chemical and elemental analysis and IR spectroscopy, conductivity (in methanol, dimethyloformamide and dimethylsulphoxide). The thermal properties of complexes in the solid state were studied. The mode of metal–ligand coordination was discussed. The title compounds are isomorphic and isostructural in solid state. All atoms in studied compounds lie in general positions but occurrence of inversion on the midpoint of the bond linking two pyridine rings leads to existence in asymmetric unit one complex molecule and half of outer coordination sphere 4-bpy molecule. All chelating carboxylate groups are symmetrically bonded to the metal cations. The molecules of studied compounds are connected to the three dimensional network via O–H···O and O–H···N intermolecular hydrogen bonds. In the structures also exist C–H···O, C–H···Cl weak hydrogen bonds and π····π stacking interactions.     

Unsymmetrical 1-naphthyltellurium(IV) dihalides: the interplay of Te···Br,C–H···Br and C–H···π interactions in the crystal structure of (1-naphthyl)(4-methylphenyl)tellurium(IV) dibromide

The crystal structure of (1-naphthyl)(4-methyl- phenyl)tellurium(IV) dibromide, the first unsymmetrical naphthyl containing diorganotellurium(IV) dibromide, shows the formation of one-dimensional supramolecular arrays where Te···Br secondary bonds link two parallel rows of molecules in a gear-teethed fashion. The weaker C–H···Br and C–H···π hydrogen bonds play important role in the formation of three-dimensional crystal lattice by cross linking these supramolecular motifs.     

Azabicyclo[3.3.1]nonanone: a case when weak interactions are preferred over strong hydrogen bonds

Derivatives of azabicyclo[3.3.1]nonanone tend to prefer for weak interactions in the crystal over strong N–H···O hydrogen bonds. The main stabilizing forces in the investigated azatricyclo[7.3.1.0^2,7]trideca-trienone derivatives are C–H···O, N–H···π and C–H···π interactions, leading to interesting structural patterns. The azabicyclo[3.3.1]nonanone ring adopts chair-envelope conformation having exo-C2,C4-aromatic substituents. Amino NH is in trigonal pyramidal configuration. The interesting stereochemistry of azabicyclo[3.3.1]nonanone, driving exceptional preference for weaker interactions over strong hydrogen bonds serves a useful example toward engineering and design strategy, and structure prediction methodologies.     

Self-assembly of a [2]Pseudorotaxane Composed of Cucurbit[6]uril into Linear Pseudopolyrotaxanes by N–H···O, C–H···O and π···π Interactions

The [2]pseudorotaxane of cucurbit[6]uril (Q6) with 1,6-bis(imidazol-1-yl)hexane dihydrobromide was synthesized and its crystal structure was described. The structure of [2]pseudorotaxane was mainly stablized by host–guest C–H···O interactions. Self-assembly of the [2]pseudorotaxane produces infinite one-dimensional chains with intermolecular N–H···O, C–H···O, and π···π interactions; thus, a linear non-covalent pseudopolyrotaxane is formed.     

Four complexes with a bulky carboxylate ligand: syntheses,crystal structures,and luminescent properties

Abstract  

Four complexes of 3,3-diphenylpropanoate (L) and 4,4′-bipyridine as auxiliary bridging ligands were synthesized and characterized, namely [Zn(L)₂(4bpy)(EtOH)₂]_∞ (1), [Co(L)₂(4bpy)(EtOH)₂]_∞ (2), [Ni(L)₂(4bpy)(EtOH)₂]_∞ (3), and [Cu(L)₂(4bpy)(H₂O)]_∞ (4) (4bpy = 4,4′-bipyridine). X-ray single-crystal diffraction analyses show that complexes 1–4 all take one-dimensional (1D) fishbone-like structures incorporating bridging 4bpy ligands. The complexes show different supramolecular frameworks interlinked via intermolecular hydrogen bonds, π···π stacking, and/or C–H···π supramolecular interactions. Complex 3 only has a simple one-dimensional fishbone-like chain, whereas complexes 1 and 2 show two-dimensional supramolecular structures by interchain C–H···O hydrogen bonds. Complex 4 is assembled into two-dimensional layers and then an overall three-dimensional framework by a combination of interchain O–H···O hydrogen bonds and C–H···π supramolecular interactions. The luminescent properties of the ligands and their complexes were investigated.     

Synthesis,IR spectrum,thermal property and crystal structure of cyano-bridged heteronuclear polymeric complex, [Cd(teta)Ni(μ-CN)<Subscript>2</Subscript>(CN)<Subscript>2</Subscript>] · 2H<Subscript>2</Subscript>O

The cyano-bridged heteronuclear polymeric complex, [Cd(teta)Ni(μ-CN)₂(CN)₂] · 2H₂O (1), (teta = triethylenetetraamine) was synthesized and characterized by FT-IR spectroscopy, thermal analysis and single crystal X-ray diffraction techniques. It crystallizes in the orthorhombic system, space group Pccn. The asymmetric unit also contains two uncoordinated water molecules. The coordination geometry around the Cd(II) centre is a highly distorted octahedral. In the crystal structure, intramolecular N–H···O and intermolecular N–H···O, O–H···O and O–H···N hydrogen bonds, beside the cyano-bridged chains made up of tetracyanonickelate ions coordinated to Cd(II) ions, where the Ni(II) ion is coordinated by four cyanoligands in a square-planar arrangement, link the molecules into polymeric networks parallel to (001) plane, where the hydrogen bonded water molecules occupy the cavities between the layers. The FT-IR spectrum was reported in the 4,000–400 cm⁻¹ region. Vibration assignments were given for all the observed bands and the spectral feature also supported the structure of the polymeric complex. The decomposition reaction takes place in the temperature range 20–1,000 °C in the static air atmosphere.     

Hydrogen-bonded supramolecular motifs in crystal structures of trimethoprim barbiturate monohydrate (I) and 2-amino-4,6-dimethylpyrimidinium barbiturate trihydrate (II)

In the present study, we report the crystal structures of two organic salts, namely 2,4-diamino-5-(3′,4′,5′-trimethoxybenzyl)pyrimidinium (TMP) barbiturate monohydrate (TMPBAR) (I), 2-amino-4,6-dimethylpyrimidinium (AMPY) barbiturate trihydrate (AMPYBAR) (II). In both complexes, one ring nitrogen of TMP and AMPY are protonated as a result of proton transfer from the−CH₂ group of barbituric acid. In compound (I), the TMP cation and barbiturate anion are paired through twoN−H···O and one N−H···N hydrogen bonds. This pair further self-organizes through N−H···O hydrogen bonds to generate an array of six hydrogen bonds. These arrays are further cross-linked by N−H···O hydrogen bonds forming a sheet-like structure. The water molecule is also embedded in the sheet via O−H···O and C−H···O hydrogen bonds, forming a rosette-like supramolecular motif. TMP cations are also bridged by alternating water molecules via C−H···O and O−H···N hydrogen bonds. In compound (II), the symmetrical barbiturate anions self-organize on both sides through N−H···O hydrogen bonds generating a supramolecular chain. These chains are cross-linked by the three water molecules. A pair of barbiturate anions and two water molecules constitute an array of four hydrogen bonds (DADA quadruple array). These arrays are cross-linked by another water molecule. 2-Amino-4,6-dimethylpyrimidine cations are paired through N−H···N hydrogen bonds. These pairs are bridged by three water molecules generating a supramolecular ribbon. The barbiturate chains and base pairs are arranged in an alternate manner via N−H···O and O−H···O hydrogen bonds to generate a 3-D network.     

Novel type of mixed O–H···N/O–H···π hydrogen bonds: monohydrate of pyridine

Investigation of characteristics of hydrogen bonding between pyridine and water by MP2/aug-cc-pvdz method reveals that these two molecules may form three types of hydrogen bonds depending on nature of proton withdrawal site of pyridine. Change of orientation of water with respect to plane of aromatic ring leads to transformation of the O–H···N bond to O–H···π bond via wide region of the potential energy surface where both lone pair of the nitrogen atom and π-system make significant contribution into hydrogen bonding. Hydrogen bond in this intermediate region may be considered as mixed O–H···N/O–H···π bond representing new type of H bonds.     

Synthesis of some cyclopentenones and crystal structure of 4-hydroxy-3,4-bis(4-methoxyphenyl)-5,5-dimethyl-2-cyclopenten-1-one

Abstract  

Sodium-hydroxide-catalyzed condensation of di-p-methyl- and di-p-methoxybenzil with acetone derivatives was investigated in methanol. Di- and trisubstituted products were obtained as cyclopentenones, while tetraaryl-substituted systems were isolated as cyclopentadienones. The structures of the products were identified by elemental analysis, infrared (IR), nuclear magnetic resonance (¹H NMR), and mass spectroscopy. The solid-state structure of 4-hydroxy-3,4-bis(4-methoxyphenyl)-5,5-dimethyl-2-cyclopenten-1-one was further studied by single-crystal X-ray diffraction analysis. The title compound crystallizes in an orthorhombic space group and intermolecular O–H···O and C–H···O hydrogen bonds stabilize the crystal lattice.     

Synthesis, spectral and thermal properties, and crystal structure of catena-poly-μ-ethylenediamine(dipicolinato)zinc(II) trihydrate, {[Zn(dipic)(μ-en)]·3H2O}n

A novel metal–organic coordination polymer framework formulated as {[Zn(dipic)(μ-en)]·3H₂O} _n (1) (catena-poly-μ-ethylenediamine(dipicolinato)zinc(II) trihydrate) has been synthesized and characterized by spectral method (IR), elemental analysis, thermal analysis (TG, DTG, DTA) and single crystal X-ray diffraction techniques. It crystallizes in the triclinic system, space group P−1. The asymmetric unit contains three hydrogen-bonded water molecules and the Zn atom is five-coordinated by three N and two O atoms. In fact, it is a new one-dimensional zinc complex with the peculiarity of having the ethylenediamine ligand very unusually acting as bridge to form polymeric chains. In the crystal structure, intramolecular O–H···O and intermolecular O–H···O and N–H···O hydrogen bonds result in the formation of a supramolecular structure, in which they seem to be effective in the stabilization of the structure.     

A novel porous supramolecular complex constructed by the co-crystallization of melamine and sulfate via hydrogen bonds and aromatic π-π interaction

Co-crystallization of melamine(MA) and sulfate results in crystalline product [(C₃H₇N₆⁺)₂(SO₄²⁻)] · 2H₂O. The novel supramolecular complex has been characterized by elemental analysis, thermal analysis (TGA and DSC), nuclear magnetic resonance (NMR), and single crystal X-ray diffraction. X-ray crystallographic studies of the complex reveal that the title complex has a 3-D microporous structure which is linked by intense intermolecular hydrogen-bonding interactions (N–H······O, N–H······N, O–H······O) and aromatic π-π interaction, which stabilize the whole crystal framework. The TGA curve shows that the complex is stable up to 500 °C, above which its structure begins to collapse.     

Different coordination modes and supramolecular aggregations in copper(II) pentane-2,4-dionato compounds with 2-pyridone and 3-hydroxypyridine

Abstract  

Copper(II) bis(pentane-2,4-dionato-κ² O,O′) compounds with 2-pyridone (1) and 3-hydroxypyridine (2) were prepared by the reaction of bis(pentane-2,4-dionato-κ² O,O′)copper(II) with selected ligands. The coordination of Cu(II) in both compounds is square pyramidal with the fifth coordination site occupied by the carbonyl oxygen atom of the 2-pyridone ligand in 1 and by the nitrogen atom of 3-hydroxypyridine in 2. The X-ray crystallographic studies revealed different crystal aggregation influenced by the ability of the 2-pyridone ligand to act as a hydrogen bond donor and acceptor, and 3-hydroxypyridine acting only as a hydrogen bond donor. Intermolecular N–H···O hydrogen bonding forms dimers in 1 and infinite chains in 2. Three-dimensional aggregation is achieved by π–π interactions and C–H···π (arene) hydrogen bonding.     

Two new lead(II) coordination polymer and discrete complex containing bipyridine ligands with different positioned methyl substituents: synthesis,characterization, crystal structure determination,and luminescent properties

Lead(II) coordination polymer [Pb(5,5′-dmbpy)(μ-NO₃)₂] _n (1) and mononuclear complex [Pb(6,6′-dmbpy)(NO₃)₂] (2) (where 5,5′-dmbpy is 5,5′-dimethyl-2,2′-bipyridine and 6,6′-dmbpy is 6,6′-dimethyl-2,2′-bipyridine) were synthesized from reaction of lead(II) nitrate with 5,5′-dmbpy and 6,6′-dmbpy, respectively. Both complexes were thoroughly characterized by elemental analysis, infrared, ¹H and ¹³C NMR, UV–Vis, emission spectroscopy, as well as single-crystal X-ray diffraction. Polymer 1 possesses one-dimensional (1D) chain structure, whilst complex 2 exhibits a discrete complex which provide an extended chain parallel to the [001] direction, via weak intermolecular C–H···O hydrogen bonding. Coordination number of Pb²⁺ in 1 and 2 are 8 and 6, respectively, with the stereochemically active lone pair, resulting in the hemidirected geometry for both complexes. The nitrate anions exhibit a tridentate chelating/bridging mode in 1, and a bi-chelating mode in 2. The supramolecular features in these complexes are guided/influenced by weak directional intermolecular C–H···O hydrogen bonding (1 and 2) together with π–π and C–H···π (1) interactions. The luminescence studies of 1 and 2 confirmed that the position of methyl substituent on 2,2′-bipyridine rings has a profound effect on the fluorescence emissions.     

Synthesis and crystal structures of two isomeric nitro-α-resorcylic acids

Nitration of α-resorcylic acid (3,5-dihydroxybenzoic acid) to 3,5-dihydroxy-2-nitrobenzoic acid (1) and 3,5-dihydroxy-4-nitrobenzoic acid (2), their separation, and crystallization is described. Crystal structures of 1, 1 · 3H₂O, and 2 were determined by X-ray single-crystal diffraction analysis and compared with DFT-calculated structures. An intramolecular hydrogen bond between the nitro group and o-hydroxyl group(s) occurs in all investigated structures. Intermolecular hydrogen bonds and π···π stacking interactions determine the molecular packing. Additionally, N···O interactions have a crucial role in arrangement of the molecules in the crystal structures of 1 and 2. DFT calculations in the gas phase and in the solution reveal that minor product 2 is a more stable regioisomer than 1, the major product in the nitration reaction.     

Temperature-dependent synthesis, crystal structures, characterizations, and DFT calculations of two new copper(II) complexes with p-fluorobenzoic acid and 2,2′-bipyridine ligands

Two new copper(II) complexes, [Cu(p-FBA)₂(2,2′-bpy)]·(H₂O) (1) and [Cu(p-FBA)(2,2′-bpy)₂]·(p-FBA)₂ (2) {p-FBA = p-fluorobenzoic acid, 2,2′-bpy = 2,2′-bipyridine} have been obtained from an identical starting mixture using temperature as the only independent variable and characterized by X-ray single crystal diffraction as well as with infrared spectroscopy, elemental analysis, and thermogravimetric analysis. The results reveal that 1 has 1D infinite chain structure formed by O–H···O hydrogen bonds, while 2 features a 0D structure. Additionally, there exist C–H···O hydrogen bonds and π–π stacking interactions in 1, forming 2D supramolecular structure. Furthermore, density functional theory (DFT) calculations of the structures, stabilities, orbital energies, composition characteristics of some frontier molecular orbitals and Mulliken charge distributions of the [Cu(p-FBA)₂(2,2′-bpy)] of 1 and [Cu(p-FBA)(2,2′-bpy)₂]⁺ cation of 2 were performed by means of Gaussian 03W package and taking B3LYP/lanl2dz basis set.     

Synthesis,structural characterization and substituent effects of two copper(II) complexes with benzaldehyde ortho-oxime ligands

Two new Cu(II) complexes, [Cu(L¹)₂] (1) and [Cu(L²)₂] (2) (HL¹ = (E)-3-bromo-5-chloro-2-hydroxy benzaldehyde O-methyl oxime; HL² = (E)-3-bromo-5-chloro-2-hydroxy benzaldehyde O-ethyl oxime), have been synthesized and characterized by physicochemical and spectroscopic methods. X-ray crystallographic analyses show that complexes 1 and 2 have similar structures, consisting of one Cu(II) atom and two L⁻ units. In both complexes, the Cu(II) atom, lying on an inversion center, is four-coordinated in a trans-CuN₂O₂ square-planar geometry by two phenolate O and two oxime N atoms from two symmetry-related N,O-bidentate oxime ligands. Moreover, both complexes form an infinite three-dimensional supramolecular structure involving intermolecular C–H···Br hydrogen bonds and π···π stacking interactions between the metal chelate rings and aromatic rings. Substituent effects in the two complexes are discussed.     

Studies on mono- and dinuclear bisoxime copper complexes with different coordination geometries

Two new mono- and dinuclear Cu(II) complexes, namely [CuL¹]·0.5H₂O (1) and [(Cu₂(L²)₂)(DMF)]·0.5DMF (2) (H₂L¹ = 1,2-bis{[(Z)-(3-methyl-5-oxo-1-phenyl-1H-pyrazolidin-4(4H)-yl)(phenyl)]methylene-aminooxy}ethane; H₂L² = 1,3-bis{[(Z)-(3-methyl-5-oxo-1-phenyl-1H-pyrazolidin-4(4H)-yl)(phenyl)] methyleneaminooxy}propane), have been synthesized and characterized by X-ray crystallography. The unit cell of complex 1 contains two crystallographically independent but chemically identical [CuL¹] molecules and one crystalline water molecule, showing a slightly distorted square-planar coordination geometry and forming a wave-like pattern running along the a-axis via hydrogen bonding and π···π stacking interactions. Complex 2 has a dinuclear structure, comprising two Cu(II) atoms, two completely deprotonated phenolate bisoxime (L²)²⁻ moieties (in the form of enol), and both coordinated and hemi-crystalline DMF molecules. Complex 2 has square-planar and square-pyramidal geometries around the two copper centers, whose basic coordination planes are almost perpendicular and form an infinite three-dimensional supramolecular network structure involving intermolecular C–H···N, C–H···O, and C–H···π(Ph) hydrogen bonding and π···π stacking interactions of neighboring pyrazole rings.     

Synthesis,crystal structures and xanthine oxidase inhibitory activities of two copper(II) complexes with Schiff bases

Two azido-coordinated Schiff base Cu(II) complexes with the formulae [Cu(L1)(N₃)]·MeOH and [Cu(L2)(μ_1,1-N₃)] _n , where L1 is the deprotonated form of 2-chloro-2-[(2-ethylaminoethylimino)methyl]phenol, and L2 is the deprotonated form of 2,4-dibromo-6-[(2-dimethylaminoethylimino)methyl]phenol, have been synthesized and characterized by physico-chemical and spectroscopic methods. The X-ray crystal structures of both complexes have been determined. The Cu atom in [Cu(L1)(N₃)]·MeOH is four-coordinate in a square planar geometry, while [Cu(L2)(μ_1,1-N₃)] _n is five-coordinate with a square pyramidal geometry. The molecules in [Cu(L1)(N₃)]·MeOH are linked by intermolecular O–H···O and N–H···O hydrogen bonds, forming dimers. The molecules in [Cu(L2)(μ_1,1-N₃)] _n are linked through end-on azido bridges, forming one-dimensional chains. The xanthine oxidase inhibitory activities of both complexes were evaluated.     

Syntheses and structures of nickel(II) and copper(II) complexes with biacetyl bis(benzoylhydrazone): one-dimensional self-assembly via π–π interaction and hydrogen bonding

Reactions of Ni(O₂CCH₃)₂·4H₂O and Cu(O₂CCH₃)₂·H₂O with biacetyl bis(benzoylhydrazone) (H₂babh) in alcoholic media afford mononuclear nickel(II) and copper(II) complexes of general formula [M(babh)]. The complexes have been characterized by microanalysis (C, H, N), magnetic susceptibility, and various spectroscopic measurements. X-ray structures of both complexes have been determined. The metal centre in [Ni(babh)] is in square-planar N₂O₂ environment provided by the tetradentate babh²⁻. On the other hand, [Cu(babh)] crystallizes as distorted square-pyramidal [Cu(babh)(CH₃OH)] from methanol. Here the tetradentate babh²⁻ constitutes the N₂O₂ square-base and the O-coordinating methanol occupies the apical site. In the crystal lattice, the molecules of [Ni(babh)] form a one-dimensional π-stacked structure. The [Cu(babh)(CH₃OH)] molecules also form a one-dimensional structure with alternating long and short Cu···Cu distances via intermolecular O–H···N hydrogen bonding and π–π interaction.     

Cooperative N–H···N,N–H···O,and O–H···N bonded molecular dimers of two new 3,5-diaryl-1<Emphasis Type="Italic">H</Emphasis>-pyrazoles

Two new 3,5-diaryl-1H-pyrazoles: 3(5)-(4-tert-butylphenyl)-5(3)-(naphthalene-2-yl)-1H-pyrazole (1) and 5-(4-(benzyloxy)phenyl)-3-(furan-2-yl)-1H-pyrazole (2) were synthesized and characterized. Two strong ions peaks [2M]⁺ and [2M + Na]⁺ observed in the ESI–MS spectra are attributed to the dimerization process in solution formed by intermolecular N–H···N hydrogen bonds. The crystal structures have been determined by X-ray crystal structure analysis. Compound 1 exists as a pair of tautomers 1a and 1b, and its dimer [R ₂²(6) motif] is formed by the tautomers 1a and 1b. Compound 2 only exists as a 2a tautomer, and interesting intermolecular N–H···O and O–H···N hydrogen bonds link two pyrazoles and two methanol molecules, leading to the formation of an R ₄⁴(10) dimer motif.