Correlation of delocalization indices and current-density maps in polycyclic aromatic hydrocarbons

Using multicentre delocalization indices, the ring current maps of a large set of polycyclic aromatic hydrocarbons (PAH) are reconstructed and compared with ab initio computations of the same maps in the pseudo-pi version of the ipsocentric approach to magnetic response. The quality of the comparison indicates that both delocalization and ring current approaches capture the same information about the aromatic nature of the PAH. Aromaticity as a global property, requires knowledge of more than single circuits, but the present results suggest no need to introduce a "multidimensional character" for aromaticity.     

Ultrafast Multidimensional Laplace NMR Using a Single‐Sided Magnet

Laplace NMR (LNMR) consists of relaxation and diffusion measurements providing detailed information about molecular motion and interaction. Here we demonstrate that ultrafast single‐ and multidimensional LNMR experiments, based on spatial encoding, are viable with low‐field, single‐sided magnets with an inhomogeneous magnetic field. This approach shortens the experiment time by one to two orders of magnitude relative to traditional experiments, and increases the sensitivity per unit time by a factor of three. The reduction of time required to collect multidimensional data opens significant prospects for mobile chemical analysis using NMR. Particularly tantalizing is future use of hyperpolarization to increase sensitivity by orders of magnitude, allowed by single‐scan approach.     

Transition state barriers in multidimensional Marcus theory

Multidimensional Marcus theory is the extension of traditional Marcus theory to systems in which multiple particles are transferred. Rather than the intersecting parabolas of Marcus theory, multidimensional Marcus theory involves the intersection of paraboloids. In this paper, we examine the conditions under which a full multidimensional treatment of these paraboloids is necessary and when it is possible to use a simpler one-dimensional formalism. In particular, we examine transition state barrier energies, which are essential parameters in many reaction rate equations, and which depend on the formalism used. We find, based on both analytic calculations and numerical simulation, that the reduced one-dimensional treatment yields excellent agreement with the exact, multidimensional results over a wide variety of conditions for one particular choice of the single collective reaction coordinate. We also outline a procedure for calculating accurate multidimensional transition state barrier energies and apply it to a two-dimensional model of proton-coupled electron transfer.     

A Stimuli‐Responsive Smart Lanthanide Nanocomposite for Multidimensional Optical Recording and Encryption

A stimuli‐responsive lanthanide‐based smart nanocomposite has been fabricated by supramolecular assembly and applied as an active material in multidimensional memory materials. Conjugation of the lanthanide complexes with carbon dots provides a stimuli response that is based on the modulation of the energy level of the ligand and affords microsecond‐to‐nanosecond fluorescence lifetimes, giving rise to intriguing memory performance in the spatial and temporal dimension. The present study points to a new direction for the future development of multidimensional memory materials based on inorganic–organic hybrid nanosystems.     

Structural characterization of the complex of the Rev response element RNA with a selected peptide

INTRODUCTION: The RSG-1.2 peptide was selected for specific binding to the Rev response element RNA, as the natural Rev peptide does. The RSG-1.2 sequence has features incompatible with the helical structure of the bound Rev peptide, indicating that it must bind in a different conformation. RESULTS: The binding of the RSG-1.2 peptide to the Rev response element RNA was characterized using multinuclear, multidimensional NMR. The RSG-1.2 peptide is shown to bind with the N-terminal segment of the peptide along the major groove in an extended conformation and turn preceding a C-terminal helical segment, which crosses the RNA groove in the region widened by the presence of purine-purine base pairs. These features make the details of the bound state rather different than that of the Rev peptide which targets the same RNA sequence binding as a single helix along the groove axis. CONCLUSIONS: These studies further demonstrate the versatility of arginine-rich peptides in recognition of specific RNA elements and the lack of conserved structural features in the bound state.     

Linking protein fractionation with multidimensional monolithic reversed-phase peptide chromatography/mass spectrometry enhances protein identification from complex mixtures even in the presence of abundant proteins

Recently, multidimensional shotgun proteomics has proven to be an alternative technology able to identify hundreds of proteins from single samples. Two major limitations of the technology are the presence of high abundance proteins (e.g. RUBISCO in plant leaf tissue) and the enormous number of co-eluting peptides that overstrain the loading and resolving capacity of conventional particle-packed columns as well as the capacity of electrospray ionisation due to ion suppression. Here, the coupling of fast performance liquid chromatography (FPLC) pre-fractionation of an Arabidopsis leaf protein extract and subsequent two-dimensional liquid chromatography/mass spectrometry with improved resolution using a monolithic silica C18 capillary column allowed the identification of 1032 unique proteins in a single 4 mg total protein plant leaf tissue sample. The reassignment of peptide IDs to distinct FPLC protein fractions enhances the identification procedure, especially in the case of present protein isoforms. The proposed strategy is useful to detect proteins otherwise not seen in conventional multidimensional chromatography/mass spectrometry approaches.     

Optically addressable field effect nano-environments for chemical imaging

An optically addressable field effect device incorporating functionalized nano-environments is demonstrated for the generation of multiple response signatures of a same analyte-sensing material combination. The device can operate unsupervised and different response mechanism can be simultaneously tested and incorporated in a multidimensional response. This proof of concept explores the well-known Pd-H₂ case, while the concept is a breadboard for chemical imaging experiments.     

A critical comparison of approximation methods and models for equilibrium properties of low-barrier hydrogen bonds

Recent experimental evidence has led to the conclusion that short, strong hydrogen bonds can stabilize transition states of enzyme catalyzed biochemical reactions. Evidence for such hydrogen bonds is the low value of the isotopic fractionation factor, phi, which is defined as the equilibrium constant for the generic reaction, R-H + DOH <--> R-D + HOH, where H is the hydrogen atom participating in the low-barrier hydrogen bond in a molecule R-H. In this work we assess two approximation methods for computing the isotopic fractionation factors for single and multidimensional systems containing a low-barrier hydrogen bond. These methods are WKB and an approach that corrects the classical partition function via a quantum correction factor. We find that the latter approach is universally accurate and applicable in both single and multidimensional systems containing a low-barrier hydrogen bond. We also assess two different models for the coupling of a molecule's low-barrier hydrogen bond to other degrees of freedom, both internal and external to the molecule, and show that each leads to a lowering of the fractionation factor.     

A new procedure for separation of complex mixtures of pesticides by multidimensional planar chromatography

The objective of this communication is to report a new procedure for the separation of complex mixtures of pesticides by a combination of different modes of multidimensional planar chromatography. Complete separation of a mixture of pesticides was carried out by multidimensional planar chromatography on silica gel plates. The plates were videoscanned to show a real picture of the experimental results. Complete separation of all compounds was not possible by a single development on silica gel. The separation can be characterized as [PC x (nPC + PC + PC + PC)]. With the aid of this new procedure a complex mixture of fourteen compounds was separated on a 10 x 10 cm TLC plate.     

Ontology recapitulates physiology

High-content information experiments in the post-genomic era hold the promise of deciphering age-old questions in biology and new ones in the biomedical arena. In response, researchers are devising computationally intensive and novel strategies to extract answers from multidimensional data sets.     

Multidimensional Raman spectroscopic signature of sweat and its potential application to forensic body fluid identification

This proof-of-concept study demonstrated the potential of Raman microspectroscopy for nondestructive identification of traces of sweat for forensic purposes. Advanced statistical analysis of Raman spectra revealed that dry sweat was intrinsically heterogeneous, and its biochemical composition varies significantly with the donor. As a result, no single Raman spectrum could adequately represent sweat traces. Instead, a multidimensional spectroscopic signature of sweat was built that allowed for the presentation of any single experimental spectrum as a linear combination of two fluorescent backgrounds and three Raman spectral components dominated by the contribution from lactate, lactic acid, urea and single amino acids.     

Analysis of biological motors via multidimensional fractionation: a strategy

Past strategies for the analysis of ATP-fueled motors include single-motor analysis. Single-motor analysis bypasses limitations caused by motor asynchrony during the traditional ensemble averaging analysis. The present communication describes revised ensemble averaging analysis that also can bypass asynchrony-derived limitations. This revised analysis makes measurements of one motor variable dependent on the others. One example is nondenaturing gel electrophoresis with more than one dimension. Each dimension measures one of the motor variables. This multidimensional procedure is used to obtain the values of "conformational" motor variables as a function of a "clock" motor variable. In theory, the cycle of the motor can be analyzed from a single multidimensional analysis of a collection of asynchronous motors sampled at only one time. That is to say, motor asynchrony becomes an asset, rather than a liability.     

A one-dimensional energy diffusion approach to multidimensional dynamical processes in the condensed phase

We propose a generalized one-dimensional energy diffusion approach for describing the dynamics of multidimensional dynamical processes in the condensed phase. On the basis of a formalism originally due to Zwanzig, we obtain a one-dimensional kinetic equation for a properly selected relevant dynamical quantity and derive new analytical results for the dynamics of a multidimensional electron-transfer process, nonequilibrium solvation, and diffusive escape from a potential well. The calculated results for electron-transfer reactions in solvent-separated and contact ion pair systems are found to be in good agreement with the experimental results. We are able to explain the rate of the electron-transfer reaction using much smaller and reasonable values of the solvent reorganization energy in contrast to earlier works that had to use a much larger value. The proposed theory is not only conceptually simpler than the conventional approaches but is also free from many of their limitations. More importantly, it provides a single theoretical framework for describing a wide class of dynamical phenomena.     

Practical aspects of liquid‐state NMR with inductively coupled solenoid coils

Sensitivity enhancement by the use of inductively coupled milli‐ and microcoils has been demonstrated in solid‐state as well as liquid‐state NMR. In this work, we discuss the practical aspects of using inductively coupled solenoid coils of different sizes in a liquid‐state NMR spectrometer. The sensitivity and resolution enhancements from these resonant coils, with sizes ranging between 3.0 and 0.75 mm i.d., are measured for ²³Na single‐pulse and multidimensional imaging experiments and compared to the results obtained with the conventional liquids NMR 5.0‐mm saddle coil. Enhancements in voxel‐based sensitivity (SNR per √scans) were measured in multidimensional MR images and were found to be as large as 20.4 with the 0.75‐mm coil. Copyright © 2010 John Wiley & Sons, Ltd.     

Determination of spin-spin couplings from ultrahigh resolution 3D NMR spectra obtained by optimized random sampling and multidimensional Fourier transformation

An example of precise evaluation of backbone scalar J couplings using random sampling of evolution time space in 3D NMR experiments is presented. The recorded spectrum, due to violation of the Nyquist theorem limitation, exhibits ultrahigh resolution in indirect dimensions compared to standard NMR experiment acquired at the same time. The obtained results enable simple and accurate evaluation of scalar and residual dipolar couplings from a single multidimensional NMR experiment.     

生物制药研究中的多维色谱

对全二维气相色谱(GC×GC)、全二维液相色谱(HPLC×HPLC)、多维毛细管电泳等多维分离技术在生物制药研究中的应用进行了综述,其中对作者所在研究组在全二维气相色谱应用于中药及固相萃取-液相色谱联用分析系统等方面的工作做了重点介绍。由所综述的生物制药研究得出结论：多维分离方法以其高分辨、快速、自动化等特点已经在生物制药领域显示出它的巨大优势,并将发挥更大的作用。     

Parallel acquisition of two-dimensional NMR spectra of several nuclear species

We show that two or more two-dimensional NMR correlation spectra can be recorded in a single shot, using a multicoil radio-frequency probe and receiver system designed for simultaneous parallel acquisition of signals from different nuclear species such as 1H, 13C, and 15N. Dubbed PANSY (parallel acquisition NMR spectroscopy), this new technique shows promise for recording several multidimensional NMR spectra of different nuclear species in a very short time.