Structure of a new crystal modification of the bacterial NAD-dependent formate dehydrogenase with a resolution of 2.1 Å

Formate dehydrogenase (FDG) from methylotrophic bacteria Pseudomonas sp. 101 catalyzes the reaction of oxidation of the formate ion to carbon dioxide, which is accompanied by the reduction of nicotinamid adenine dinucleotide (NAD⁺). The structures of the apo and holo (enzyme-NAD-azide triple complex) forms of the enzyme were determined earlier. In an attempt to prepare a complex of FDG with the product of the enzymatic reaction (NADH), a new crystal modification of FDG is obtained (space group P4₂2₁2, a = b = 93.3 Å, c = 103.05 Å). The FDG structure is solved by the molecular replacement method and refined to R = 20.7%. The asymmetric part of the unit cell contains one FDG molecule. In contrast to the previously studied FDG structures, the biologically active dimer is formed by the crystallographic rotation axis. A comparative structural analysis of the studied form with the apo and holo forms of the enzyme is performed. The influence of the molecular structure on the environment in the crystal is investigated.     

Peculiarities of the microstructure of a nanoscale modification of η-TiO2

Samples with nanoscale η-TiO₂ phase have been obtained by sulfate and modified sulfate methods and are characterized by a complex of techniques: X-ray diffraction, electron diffraction, small-angle X-ray scattering (SAXS), scanning electron microscopy (SEM), transmission electron microscopy (TEM), high-resolution transmission electron microscopy, and X-ray energy-dispersive analysis. The effect of sample formation conditions on the size and shape of crystallites, content of the amorphous component in the samples, and their elemental composition has been established. A significant change (depending on the synthesis conditions) in the parameters of the diffraction reflection with d ～ 17–21 Å (intensity and interplanar spacing d, Å), pronounced for η-TiO₂, is revealed. This change is most likely related to the variation in the content of water molecules in the interlayer space of η-TiO₂ structure and/or the change in crystallite shape.     

Viscoelastic Parameters of a Side-Chain Nematic Polymer: I—Results of a Proton NMR Study

The reorientational behaviour in a static magnetic field of a nematic siloxane side-chain polymer is investigated by proton NMR. At variance with what occurs in main-chain and lyotropic nematic polymers, the return to equilibrium of a tnonodomain whose mean director has been rotated at an angle α to the field, is found to be homogeneous for all angles a between 0 and π/2. The usual nematic order parameter and the static (on the proton NMR time scale) order parameter are deduced from analysis of the equilibrium lineshapes. The twist viscosity γ₁ is deduced from the study of time dependent lineshapes following the rotations α. The temperature dependence of γ₁ is discussed in terms of the Vogel equation γ₁ = B S ^β exp(E _β/R(T - T _o}). It is not possible to discriminate between β = 1 or 2, but in both cases, the freezing temperature of the director T_o is found to be non-zero. A nematic to smectic pretransitional effect on γ₁ is observed. The information concerning the viscoelastic parameters contained in the value of the static order parameter is also discussed.     

The crystal and molecular structure of one of the possible conformers of “the smallest piece of ice”—A solid-state isolation of a hydrogen bonded water hexamer trapped within channels of a crystal of a dirhodium molecule

Reexamination of our study of [Rh₂(HNOCCH₃)₄(2H₂O)] 3H₂O (Ahsan, M.Q.; Bernal, I.; Bear, J.L. Inorg. Chem. 1986, 26 260) showed it to be interesting not just because the dirhodium molecule is an antineoplastic but because it contains a hexameric cluster of waters trapped in Rh–Rh lattice cavities. It may well provide an interesting model for the smallest piece of ice (Nauta, K.; Miller, R.E. Science 2000, 287, 293).     

Structure of a liquid crystal of 4-cyano-4′-n-octyloxybiphenyl

The structure of a liquid crystal of 4-cyano-4′-n-octyloxybiphenyl (C₂₁H₂₅NO) is determined by X-ray diffraction analysis. The compound crystallizes in the triclinic crystal system with unit cell parameters a = 7.322(1) Å, b = 12.693(3) Å, c = 20.393(2) Å, α = 92.45(1)°, β = 99.96(1)°, γ = 99.35(2)°, and space group $P\bar 1$ . The structure is solved by the direct method and refined to R = 0.057. Two independent molecules are located in the asymmetric unit. No short intermolecular contacts are observed in the crystal packing.     

Crystal structure of a (μ-bis(carbene))dimetal complex of tungsten

The (-bis(carbene))ditungsten complex, (CO)₅W{(C(OCH₂Ph)C(CH₂C₂H₃)(Me)CH₂CH₂C(OCH₂Ph)}W(CO)₅ (1) is only the fifth such complex to be crystallographically characterized. The steric demands of one side of the bis(carbene) ligand gives rise to small, but statistically significant differences in the bonding parameters to W. The W=C distances are 2.195(4) and 2.171(6)Å. The carbonyltrans to the longest W=C bond has the shortest of the ten W-CO separations (1.994(5)Å) and the longest CO bond length (1.156(6)Å). The planes defined by the two carbene groups have a dihedral angle of 44.5°.     

Theoretical Study of a Hybrid Organic–Inorganic Heteropolyoxometalate Compound

Crystallography Reports - Large study of theoretical calculations for the hybrid organic-inorganic heteropolyoxometalate (C6H8N)5[HAs2Mo6O26(H2O)]⋅3H2O (1) is reported. The results of...     

Nepetanudone, a dimer of the α-pyrone 5,9-dehydronepetalactone

The title compound C₂₀H₂₄O₄ crystallizes in the orthorhombic space group P2₁2₁2, with a = 10.245(3), b = 17.103(3), c = 9.879(3) Å, D _c = 1.260 g cm ^–3, and Z = 4. Nepetanudone is postulated to be formed by a [4+4] cycloaddition of two 5,9-dehydronepetalactone moieties to give an asymmetric dimer in which each pair of atoms is magnetically nonequivalent. The compound was recovered from extracts of Nepeta nuda ssp. albiflora.     

The Eγ′ center as a probe of structural properties of nanometer-sized silica particles

A Q-band electron spin resonance (ESR) study is reported of E′ type point defects observed in ～7 nm-sized fumed silica nanoparticles following 10-eV irradiation to photodissociate H from passivated defects. In a comparative study with bulk silica (suprasil), the E′ center is used as an atomic probe to get more in depth information on the network structure of the nm-sized particles. The nanoparticles were brought into contact with ‘bulk’ Si/SiO₂ entities at an elevated temperature in vacuum (T_an = 1105 °C), i.e., the presence of an Si/SiO₂ interface. As a result of this post manufacture treatment, the E′ density increased drastically (>order of magnitude), enabling us to resolve hyperfine (hf) structure of the E′ centers located in the core region of the nanoparticles. Two doublet structures are observed, one each assigned to O₂Si–H entities and the primary ²⁹Si hf structure of the E′ centers. Analysis of these hf spectra reveals interesting information on the network structure of the core region of the nanoparticles: (1) Fumed silica is found to contain relatively less hydrogen than suprasil. (2) An increased ²⁹Si hf splitting (439 ± 2 G) is observed compared to bulk silica (418 ± 2 G), indicating that the E′ centers located in the core of the nanoparticles exhibit on average a slightly more pyramidal defect structure, and moreover, providing evidence that the fumed silica particles are densified compared to standard bulk silica, possibly originating from the presence of more low-membered rings (n < 5) in the nm-sized silica network.     

Viscoelastic Parameters of a Side-Chain Nematic Polymer: II—Analysis of NMR Results in Terms of the Anisotropic Dumbbell Model

The two viscoelastic parameters of a siloxane side-chain nematic polymer—twist viscosity coefficient, and static order parameter—deduced from the NMR study of Reference 1, are discussed in terms of the anisotropic dumbbell model of Brochard using structural information obtained by small angle neutron scattering. It is found that this model, originally developed for dilute solutions of flexible polymers in low molecular mass nematics, describes satisfactorily the data, supporting the idea that the backbone polymer chains are not entangled in the nematic melt. An average elastic constant is deduced. This constant is found to increase sharply as the nematic-smectic A phase is approached. The twist elastic constant is calculated using splay and bend elastic constant values of a very similar polymer. Some (possibly only apparent) difficulties associated with the dumbbell model are pointed out.     

Investigation of the photovoltaic performance of the polycrystalline silicon p–n junction by a photothermal measurement

For establishing a new methodology for evaluating an effect of the grain boundaries, both the piezoelectric photo-thermal (PPT) and the surface photo-voltage (SPV) measurements of polycrystalline Si p–n junction samples with different volume fractions of grain boundaries were carried out. We could define the signal intensity ratio of SPV/PPT as the key indicator of photovoltaic performance. This is because the PPT signal implies the phonon emitting carrier loss, whereas the SPV denotes the photo-excited carrier accumulation at the surface and the junction interface. It was found that the SPV/PPT ratio and solar cell efficiency decreased with increasing volume fraction of the grain boundaries. Present experimental results demonstrated that one can directly estimate the photovoltaic performance of in-process polycrystalline Si p–n junction wafer by adopting the combination of the PPT and the SPV methodologies without electrodes. Since the PPT detects the non-radiative recombination process, present methodology and the laser-beam-induced current and the photoluminescence imaging methods are complementary. By complementary use of these methods, it becomes possible to investigate the characteristic of grain boundary.     

Self-assembly of LiFePO4 nanodendrites in a novel system of ethylene glycol–water

In this work, a novel system of ethylene glycol/water (EG/W) was employed to synthesize LiFePO₄, in which dodecyl benzene sulphonic acid sodium (SDBS) was used as soft template to control particle morphology. The samples were characterized by X-ray diffractometer (XRD), field emission scanning electron microscopy (FE-SEM), high resolution transmission electron microscopy (HRTEM), selected area electron diffraction (SAED) and energy dispersive X-ray spectroscopy (EDX). The LiFePO₄ sample obtained by the reported method displays interesting hierarchical nanostructure (i.e. nanodendrites), which was constructed by nanorods of 3–5 μm in length and ∼50 nm in diameter. The EG/W ratio, amount of SDBS added, hydrothermal temperature and duration played important roles in the assembly of the hierarchical nanostructures. A formation mechanism was proposed and experimentally verified. It is concluded that the nanodendrites were formed due to the end-to-end self-assembly of nanorods. Compared to previously reported methods, the reported approach shows obvious advantages of one-step synthesis, environmental friendliness and low cost, to name a few. The nanodendrites as a cathode material have a higher capacity, compared with the other samples.     

Preparation and ionic conductivity of transparent glass−ceramics containing a large quantity of lithium−mica

In order to crystallize a large quantity of the lithium?mica in glass?ceramics, 5.1 mass% MgF₂ was added to the starting materials of the parent glasses having chemical compositions of Li_(1+x)Mg₃AlSi_3(1+x)O_10+6.5xF₂ (x = 0.5 and 1.0). Transparent glass?ceramics, in which a large quantity of lithium?mica with particle size of <50 nm was separated, could be prepared from the MgF₂-added parent glass with x = 0.5. While the parent glass, which had a binodal phase separation structure, did not exhibit electrical conductivity, the transparent glass–ceramic was given conductivity by the formation of an interlocking structure of mica. As the separated mica formed a tighter interlocking structure, the conductivity increased and reached a value of 2.0 × 10^?3 S/cm at 600 °C. The MgF₂-added parent glass with x = 1.0 was not transparent because of coarse spinodal phase separation. The conductivity was 4.3 × 10^?4 S/cm at 600 °C but was significantly decreased by the separation of mica.     

Conoscopic image of a biaxial nematic phase in a sodium decyl sulfate – decanol – D2O mixture

ABSTRACT

The nematic phases of a lyotropic system NadS/ decanol/ heavy water are investigated using optical conoscopy and image processing. The phase diagram obtained from these lyotropic materials predicts the occurrence of a direct phase transition, which does not present the biaxial nematic phase, between the discotic (N_D) and calamitic (N_C) nematic phases. A biaxial nematic (N_B) phase is optically characterized and confirmed through conoscopic image, inside the biaxial range, between the two uniaxial nematic phases. Also, their respective transition points are determined by means of image processing. The N_B phase observed here is discussed as part of the nature of the micellar configuration of lyotropic materials which exhibit uniaxial nematic phases.     

The Possibility of the Existence of a Positive Leslie Viscosity α2. Proposed Flow Behavior of Disk Like Nematic Liquid Crystals

The signs of the Leslie viscosities α₂ and α₃ for nematics consisting of disk like molecules are discussed. It is predicted on theoretical grounds that for disk like molecules α₃ is always positive while α₂ should be able to exhibit both positive and negative values. This is the first time that the possibility of a positive α₂ is discussed in the literature. Provided that the prediction is correct, the nature of the flow behavior of disk like molecules is discussed.     

Synthesis and Structure of a Chromium(III) Complex Supported by a β-diketiminate and an Enediolate Ligand

Abstract  

The complex (bis(2,6-diisopropylphenyl)pentane-2,4-ketiminato)(9,10-dihydro-9,10-(ethenediolato)anthracene)(tetrahydrofuran)chromium(III) (1) has been synthesized and structurally characterized. Complex 1 crystallizes in the spacegroup Cc with the crystal cell parameters a = 22.285 (3) ?, b = 9.3317 (13) ?, c = 40.782 (6) ?, β = 99.338 (3)°, V = 8369 (2) ?³, and Z = 8. Two symmetry unique complex molecules were located in the asymmetric unit making Z′ = 2. The chromium atoms display square pyramidal coordination with THF located in the axial position. The previously neutral α-diketone moiety has been reduced by two electrons to an enediolate group with a corresponding increase of oxidation state of the chromium center.     

Optical and dielectric properties of an isothiocyanato liquid crystal compound and comparison of its behavior with that of a homologous member

The properties of an isothiocyanato liquid crystal compound (code name S1) has been studied with a view to compare its behavior with that of another member of its homologous series (code name S5). Optical properties, such as refractive index, polarisability, and their anisotropies, have been evaluated with varying temperature and the orientational order experimentally determined from the study of polarisability anisotropy and compared with theoretically computed values. Dielectric studies have been conducted to determine not only the dielectric anisotropy but also the effective molecular dipole moment and its temperature dependence. The temperature variation of the angle of inclination (β) of molecular dipole moment with the director direction has also been determined and compared with that of S5. In order to determine the nature of molecular association in the mesophase, the molecular correlation factor (g) has been estimated from the measurements of dipole moments of compound in solution and compared with the values obtained for S5.     

The crystal and molecular structure of a new polymorph of carbonylhydridotris(triphenylphosphine)rhodium(I) having a Rh-H stretching absorption at 2013 cm−1

A new polymorph of HRh(CO)(PPh₃)₃, with a Rh-H of 2013 cm^–1, has been isolated by crystallization fromtert-butyl methyl ether/tetrahydrofuran. The crystals are monoclinic (space groupP2₁/n), witha=21.48(2) Å,b=14.92(2)Å,c=14.52(1)Å,=107.95(8)°. A finalR value of 0.065 was obtained using 2243 reflections which hadI _net>2.5(I _net). The structure of the new polymorph has a similar coordination geometry to the known polymorph, but a different conformation of one of the phenyl rings.