A study of the conformational stability and the vibrational spectra of 2,3-dichloro-1-propanol

The conformational stability and the three rotor internal rotations in 2,3-dichloro-1-propanol were investigated at DFT-B3LYP/6-311 + G**, MP2/6-311 + G** and MP4(SDQ) levels of theory. From the calculated potential energy surface, ten distinct minima were located all of which were predicted to have real frequencies at the B3LYP level of theory. The calculated lowest energy minima in the potential curves of the molecule were predicted to correspond to the Ggg and Gtg1 structures. The observed broad and very intense infrared band centered at about 3370 cm^?1 supports the existence of the strong intermolecular H-bonding in 2,3-dichloro-1-propanol. The equilibrium constants for the conformational interconversion in the molecule were estimated from the calculated Gibb's energies at the B3LYP/6-311 + G** level of calculation and found to correspond to an equilibrium mixture of about 49% Ggg, 27% Gtg1, 5% Ggt and 5% Tgg conformations at 298.15 K.     

Infrared and Raman spectra,DFT investigation of the tautomerism,conformational equilibrium,structure and vibrational assignment of 1-(2-benzothiazolyl)-3-methyl pyrazol-5-one

The low energy conformations of the three tautomers, imine-enol, enamine-keto and imine-keto forms of the title compound have been determined at the B3LYP/6-31 + G(d) level of theory using the relaxed PES scan method and their geometries have been refined at B3LYP/6-311 + G(d,p) and PBE0/6-311 + G(d,p) levels. The results show that the title compound exists in the imine-enol tautomeric form, in contrast to the enamine-keto form which exists in the solid crystalline state, followed by enamine-keto and imine-keto forms with extremely low abundances. The geometry parameters of all tautomeric forms calculated at PBE0/6-311 + G(d,p) and B3LYP/6-311 + G(d,p) levels have been compared with those from the experimental X-ray diffraction. The vibrational (FT-IR and Raman) spectroscopic studies of the most stable tautomer, enamine-keto form have been carried out. The assignment of the fundamental bands observed in the IR and Raman spectra have been facilitated by the SQM force field procedure. The frequencies from SQM procedure have a very good fit to the experimental ones. The total root-mean-square error is only ca. 11 cm⁻¹.     

Experimental and computational thermodynamic study of ortho-, meta-, and para-methylbenzamide

The Knudsen mass-loss effusion technique was used to measure the vapour pressures of the three crystalline isomers of methylbenzamide. From the temperature dependence of the vapour pressures, the standard molar enthalpies of sublimation and the enthalpies of the intermolecular hydrogen bonds N−H⋯O were calculated. The temperature and molar enthalpy of fusion of the studied isomers were measured using differential scanning calorimetry. The values of the standard (p^° = 0.1 MPa) molar enthalpy of formation in the crystalline phase, at T = 298.15 K, of the compounds studied were derived from their standard massic energies of combustion measured by static-bomb combustion calorimetry. From the experimental values, the standard molar enthalpies of formation in the gaseous phase, at T = 298.15 K, were calculated and compared with the values estimated by employing computational calculations that were conducted using different quantum chemical methods: G3(MP2), G3, and CBS-QB3. Good agreement between experimental and theoretical results is verified. The aromaticity of the compounds has been evaluated through nucleus independent chemical shifts (NICS) calculations.     

Are dispersive forces relevant for CO adsorption on the MgO(0 0 1) surface?

Periodic ab initio B3-LYP calculations on the MgO(0 0 1)/CO system underestimate the CO binding energy value with respect to experiment. The flaw is in the B3-LYP functional, unable to compute dispersive interactions. Here we show how to evaluate this contribution by adopting a two-layer ONIOM scheme in which the B3-LYP crystal energy is improved by the MP2 energy computed on the Mg₉O₉/CO cluster. The final complete basis set extrapolated (MP2/∞:B3-LYP/VTZ) CO/Mg(0 0 1) binding energy of 13 kJ/mol is in good agreement with experiment, with about 7 kJ/mol deriving from dispersive interactions.     

X-ray and vibrational spectra on metal complexes with indolecarboxylic acids: Part IV. Catena-poly[{aqua(η2-indole-3-carboxylato-O,O′)zinc}-μ-indole-3-carboxylato-O:O′]

The new zinc(II) coordination polymer catena-poly[{aqua(η²-indole-3-carboxylato-O,O′)zinc}-μ-indole-3-carboxylato-O:O′], [Zn(I3CA)₂(H₂O)]_n [Zn(I3CA)₂(H₂O)]_n has been synthesized and characterized using infrared and Raman spectroscopy and X-ray single-crystal diffraction analysis. The crystals are monoclinic, space group Cc, with a = 33.319(7), b = 5.985(1), c = 8.291(2) Å, V = 1653.1(6) Å³ and z = 4. Each zinc centre is five-coordinated by the bidentate chelating indole-3-carboxylato, one oxygen atom bridging indole-3-carboxylato, water molecule and one oxygen atom bridging indole-3-carboxylato from an adjacent [Zn(I3CA)₂(H₂O)] unit. The Zn–O distances of 1.978(4), 1.987(3), 1.977(4), 1.983(3) and 2.519(4) Å, are typical for distances of such complexes. The infrared and Raman spectroscopic data of [Zn(I3CA)₂(H₂O)]_n in the solid state are supported by X-ray analysis. The theoretical wavenumbers, infrared intensities and Raman scattering activities have been calculated by the density functional methods (B3LYP and mPW1PW) with the D95V^**/LanL2DZ and 6-311++G(d,p)/LanL2DZ basis sets. The theoretical wavenumbers, infrared intensities and Raman scattering activities show a good agreement with experimental. Detailed band assignment has been made on the basis of the calculated potential energy distribution (PED). The results provide information on the strength of zinc-ligand bonding in complex.     

Thermodynamics of the hydrolysis reactions of adenosine 3′,5′-(cyclic)phosphate(aq) and phosphoenolpyruvate(aq); the standard molar formation properties of 3′,5′-(cyclic)phosphate(aq) and phosphoenolpyruvate(aq)

Molar calorimetric enthalpy changes Δ_rH_m(cal) have been measured for the biochemical reactions {cAMP(aq) + H₂O(l)=AMP(aq)} and {PEP(aq) + H₂O(l)=pyruvate(aq) + phosphate(aq)}. The reactions were catalyzed, respectively, by phosphodiesterase 3^′,5^′-cyclic nucleotide and by alkaline phosphatase. The results were analyzed by using a chemical equilibrium model to obtain values of standard molar enthalpies of reaction Δ_rH_m^∘ for the respective reference reactions {cAMP⁻(aq) + H₂O(l)=HAMP⁻(aq)} and {PEP³⁻(aq) + H₂O(l)=pyruvate⁻(aq) + HPO²⁻₄(aq)}. Literature values of the apparent equilibrium constants K^′ for the reactions {ATP(aq)=cAMP(aq) + pyrophosphate(aq)}, {ATP(aq) + pyruvate(aq)=ADP(aq) + PEP(aq)}, and {ATP(aq) + pyruvate(aq) + phosphate(aq)=AMP(aq) + PEP(aq) + pyrophosphate(aq)} were also analyzed by using the chemical equilibrium model. These calculations yielded values of the equilibrium constants K and standard molar Gibbs free energy changes Δ_rG_m^∘ for ionic reference reactions that correspond to the overall biochemical reactions. Combination of the standard molar reaction property values (K, Δ_rH_m^∘, and Δ_rG_m^∘) with the standard molar formation properties of the AMP, ADP, ATP, pyrophosphate, and pyruvate species led to values of the standard molar enthalpy Δ_fH_m^∘ and Gibbs free energy of formation Δ_fG_m^∘ and the standard partial molar entropy S_m^∘ of the cAMP and PEP species. The thermochemical network appears to be reasonably well reinforced and thus lends some confidence to the accuracy of the calculated property values of the variety of species involved in the several reactions considered herein.     

Structure of the complex of dimethylphenyl betaine with dichloroacetic acid studied by X-ray diffraction,DFT calculations,infrared and Raman spectra

The structure of the complex of dimethylphenyl betaine (DMPB) with dichloroacetic acid (DCA) (1) has been investigated by X-ray diffraction, FTIR and Raman spectroscopy, and B3LYP/6-311 + + G(d,p) calculations. The crystal is monoclinic, space group P2₁. The acid is connected with betaine through the OH⋯O hydrogen bond of 2.480(2) Å. In the optimized structure the short, asymmetric O⋯O distance is 2.491 Å. FTIR spectrum shows a broad absorption in the 1500–400 cm⁻¹ region characteristic of very short OH⋯O hydrogen bond caused by Fermi resonance between νOH and overtones of δOH and γOH. In the Raman spectrum this broad absorption is not observed. The potential energy distributions (PED) were used for the assignments of IR and Raman frequencies in the experimental and calculated spectra. The FTIR and Raman spectra of the crystal complex are consistent with the X-ray results.     

Effect of temperature on the excess molar volumes of some alcohol + aromatic mixtures and modelling by cubic EOS mixing rules

Densities of the (methanol + benzene), (ethanol + benzene), (methanol + chlorobenzene) and (ethanol + chlorobenzene) mixtures have been measured at six temperatures (288.15, 293.15, 298.15, 303.15, 308.15 and 313.15 K) and 101.33 kPa. Excess molar volumes V^E were determined and fitted by the Redlich–Kister equation. It was observed that in all cases V^E increases with rising of temperature. The values of limiting excess partial molar volumes have been calculated, as well. The obtained results have been analysed in terms of specific molecular interactions present in these mixtures taking into considerations effect of temperature on them. The correlation of V^E binary data was performed with the Peng–Robinson–Stryjek–Vera cubic equation of state (PRSV CEOS) coupled with the van der Waals (vdW1) and CEOS/G^E mixing rule introduced by Twu, Coon, Bluck and Tilton (TCBT). The experimental values of V^E were compared with those estimated by both mixing rules at the temperature range and on each temperature, separately.     

Stable iminonitroxide biradicals: Building blocks for organic heterospin,heteromolecular complexes

A stable cationic biradical has been designed and synthesized, and its magnetic property and crystal structure have been examined. An iminonitroxide derivative of 3,5-disubstituted pyridine (1) with a triplet ground state has been cationized by a reaction with methyl trifluoromethanesulfonate (MeTfO), which gave a salt of N-methylated pyridinium 2⁺, 2⁺ · TfO⁻. The ground state of the cation 2⁺ has been found to be triplet with 2J/k_B = 7.5 K from magnetic susceptibility measurements for 2⁺ · TfO⁻ in a magnetically diluted organic matrix. The magnetic susceptibility of neat crystalline solids of 2⁺ · TfO⁻ has been explained by an exchange coupling model based on the X-ray crystal structure. It is well known that the energy preference for a high-spin ground state for a m-phenylene coupling unit is disturbed by heteroatomic substitution and an ionic charge. The present experimental results show that the high-spin preference in 1 is little affected by the ionic charge in 2⁺. The ground-state triplet biradical serves as building blocks for molecule-based magnets of S > 1/2 of molecular assemblages based on electrostatic interactions between molecular ions.     

The infrared spectrum of bis(fluorosulfonyl)imide revisited: Attractive performances of the PBE0/6-31G** model

We report a systematic investigation of the far- and mid-infrared spectra of ionic liquids (ILs) containing the bis(fluorosulfonyl)imide (FSI) anion, both in the liquid state at room temperature and in solid phases at low temperatures. We extended to lower frequencies a previous study, and we observed four additional vibration bands below 500 cm⁻¹, attributable to FSI. Moreover, DFT calculations of vibration frequencies were performed using three combinations of theory and basis set: (1) B3LYP/6-31G**, (2) B3LYP/6-311 + G(3df) and (3) PBE0/6-31G**. Model 1, largely used in the previous literature concerning ILs, shows the poorest performances; model 2, which generally gives a good agreement with the experiments, misses the vibration frequencies by ∼40 cm⁻¹ in the range 650–900 cm⁻¹ where one finds the largest spectral differences between cis- and trans-FSI; model 3 gives the best agreement with the experiments and, moreover, is much less time consuming than model 2. The comparison with calculations suggests that the band centered around 1217 cm⁻¹ is a good marker of the occurrence of the cis-FSI conformer. Finally, the bands located around 730 and 750 cm⁻¹ are attributable to cis- and trans- conformer of FSI, respectively.     

Thermochemical properties of 4-N,N-dialkylamino-7-nitrobenzofurazan derivatives (alkyl = methyl,ethyl)

The standard (p° = 0.1 MPa) molar enthalpies of formation, at T = 298.15 K, in the gaseous phase, for two nitrobenzofurazan derivatives, 4-N,N-dimethylamino-7-nitrobenzofurazan (DMANBF) and 4-N,N-diethylamino-7-nitrobenzofurazan (DEANBF), were derived from their enthalpies of combustion and sublimation, obtained by static bomb calorimetry and by the Knudsen effusion technique, respectively. The results are compared with the corresponding data calculated by the G3(MP2)//B3LYP approach. Computationally, the molecular structures of both compounds were established and the geometrical parameters were determined at the B3LYP/6-31G(d) level of theory.     

Fourier transform and high sensitivity cw-cavity ringdown absorption spectroscopies of ozone in the 6030–6130 cm−1 region. First observation and analysis of the 3ν1+3ν3 and 2ν2+5ν3 bands

The absorption spectrum of ¹⁶O₃ has been recorded between 6030 and 6130 cm⁻¹ by Fourier Transform Spectroscopy (GSMA, Reims) and cw-cavity ringdown spectroscopy (LSP, Grenoble). The two new bands 3ν₁+3ν₃ and 2ν₂+5ν₃ centered at 6063.923 and 6124.304 cm⁻¹, respectively are observed and analyzed. Rovibrational transitions with J and K_a values up to 40 and 10, respectively, could be assigned. The rovibrational fitting of the observed energy levels shows that some rotational levels of the (303) and (025) bright states are perturbed by interaction with the (232), (510) and (124) dark states. The observed energy levels could be reproduced with a rms deviation of 5×10⁻³ cm⁻¹ using a global analysis based on an effective Hamiltonian including the five interacting states. The energy values of the three dark vibrational states provided by the fit are found in good agreement with theoretical predictions.The parameters of the resulting effective Hamiltonian and of the transition moment operator retrieved from the measured absolute line intensities allowed calculating a complete line list of 2035 transitions, available as Supplementary Material. The integrated band strengths are estimated to be 1.22×10⁻²⁴ and 3.15×10⁻²⁴ cm⁻¹/(mol cm⁻²) at 296 K for the 3ν₁+3ν₃ and 2ν₂+5ν₃ bands, respectively. A realistic error for these band strengths is 15% (see text).     

2,1,3-Benzothiadiazole: Study of its structure,energetics and aromaticity

The present work reports an experimental study on the energetics of 2,1,3-benzothiadiazole and a computational study on its structure, energetics and aromaticity. In the experimental part the standard (p° = 0.1 MPa) massic energy of combustion, at T = 298.15 K, was measured by rotating bomb combustion calorimetry, in oxygen, and allowed the calculation of the respective standard molar enthalpy of formation, in the crystalline phase, at T = 298.15 K. The standard molar enthalpy of sublimation, at T = 298.15 K, was measured by high-temperature Calvet microcalorimetry. From the combination of data obtained by both techniques we were able to calculate the respective standard molar enthalpy of formation, in the gas phase, at T = 298.15 K: (276.6 ± 2.5) kJ · mol⁻¹. This thermochemical parameter was compared with estimates obtained from high level ab initio quantum chemical calculations using the G3(MP2)//B3LYP composite method and various appropriately chosen reactions. The molecular structure of 2,1,3-benzothiadiazole was obtained from DFT calculations with the B3LYP density functional and various basis sets: 6-31G(d), 6-311(d,p), 6-311+G(3df,2p), aug-ccpVTZ and aug-ccpVQZ and its aromaticity and that of some related molecules were evaluated by analysis of nucleus independent chemical shifts (NICS) values.     

Excess molar enthalpies and excess molar volumes of (1,3-dimethyl-2-imidazolidinone + an aromatic hydrocarbon) atT = 298.15 K

Excess molar enthalpies H_m^Eand excess molar volumesV_m^E of (1,3-dimethyl-2-imidazolidinone  +  benzene, or methylbenzene, or 1,2-dimethylbenzene, or 1,3-dimethylbenzene, or 1,4-dimethylbenzene, or 1,3,5-trimethylbenzene, or ethylbenzene) over the whole range of compositions have been measured at T =  298.15 K. The excess molar enthalpy values were positive for five of the seven systems studied and the excess molar volume values were negative for six of the seven systems studied. The excess enthalpy ranged from a maximum of 435 J · mol ^− 1for (1,3-dimethyl-2-imidazoline  +  1,3,5-trimethylbenzene) to a minimum of  − 308 J · mol ^− 1for (1,3-dimethyl-2-imidazoline  +  benzene). The excess molar volume values ranged from a maximum of 0.95cm³mol ^− 1 for (1,3-dimethyl-2-imidazoline  +  ethylbenzene) and a minimum of  − 1.41 cm³mol ^− 1for (1,3-dimethyl-2-imidazoline  +  methylbenzene). The Redlich–Kister polynomial was used to correlate both the excess molar enthalpy and the excess molar volume data and the NRTL and UNIQUAC models were used to correlate the enthalpy of mixing data. The NRTL equation was found to be more suitable than the UNIQUAC equation for these systems. The results are discussed in terms of the polarizability of the aromatic compound and the effect of methyl substituents on the benzene ring.     

Potential energy surface and rate constant of the inversion substitution reactions CH3X + O2 → CH3O2• + X• (X = SH,NO2)

The temperature dependence of the rate constant of the inversion substitution reactions CH₃X + O₂ → CH₃O₂^? + X^? (X = SH, NO₂), can be expressed as k = 6.8 × 10^–12(T/1000)^1.49exp(–62816 cal mol^–1/RT) cm³ s^–1 (X = SH) and k = 6.8 × 10^–12(T/1000)^1.26 × × exp(–61319 cal mol^–1/RT) cm³ s^–1 (X = NO₂), as found with the use of high-level quantum chemical methods and the transition state theory.