Novel ion mobility setup combined with collision cell and time-of-flight mass spectrometer

An ion mobility cell of a novel type was coupled to an orthogonal injection time-of-flight (TOF) mass spectrometer. The mobility cell operates at low-pressure and contains a segmented RF ion guide providing an axial electric field that drives the ions towards the exit. A flow of gas is arranged inside the ion guide in such a way that the gas drag counteracts the force exerted by the axial field. Ions with different mobility coefficients can be scanned out of the ion guide by ramping the axial field strength. The ions can be analyzed intact or fragmented in a collision cell before introduction into an orthogonal TOF mass spectrometer. An ion source with matrix assisted laser desorption/ionization (MALDI) was attached to the instrument. The setup was evaluated for the analysis of peptide and protein mixture, with sequential fragmentation of multiple precursor ions from a protein digest and with mobility separation of fragment ions formed by in-source fragmentation of pure peptides. The mobility resolution for peptides was observed to be three times higher than the theoretical resolution predicted for a classical mobility setup with similar operating conditions (pressure, field strength, and length).     

Variable low-mass filtering using an electrodynamic ion funnel

An adjustable low-mass filter has been developed for an electrospray ionization (ESI) source to block ions associated with unwanted background species from entering the mass spectrometer. The low-mass filter is made by using an adjustable potential energy barrier from the conductance-limiting plate of an electrodynamic ion funnel, which prohibits species with higher ion mobilities from exiting the ESI source. We show that this arrangement provides a linear voltage adjustment for low-mass filtering from m/z 0 to 500. Mass filtering above m/z 500 is also performed; however, higher-mass species are attenuated. The mass filter was tested with a liquid chromatography/mass spectrometry (LC/MS) analysis of a bovine serum albumin (BSA) tryptic digest and resulted in the ability to block low-mass, background species, which accounted for 40-70% of the total ion current immediately behind the ESI source during peak elution and detection.     

Ion funnels for the masses: Experiments and simulations with a simplified ion funnel

A modified ion funnel is described. Counterintuitively, increased spacing between electrodes results in enhanced "focusing" of the ions through the funnel. Consequently, the internal diameter (i.d.) of the funnel need not decrease to the conductance limit (as in previous designs). A simple dc-only lens, which also serves as the conductance limit, combined with the natural flow of gas is used to extract the ions from the funnel. Ions with mass to charge ratios varying between 75 and 3000 m/z are passed through the funnel with no apparent discrimination. The funnel can be operated under mild conditions that preserve weakly bound noncovalent complexes. After testing several designs, a thin closely spaced dc lens was found to be the best solution for extracting ions. A simple method for simulating ion trajectories at nonzero pressures based on ion mobility and explicit diffusion is described. This theoretical approach was used to design and calculate ion trajectories for the modified funnel presented here. Finally, the increased spacing between electrodes in the current funnel significantly relaxes machining constraints, reduces cost, and enhances ease of use versus previous funnel designs.     

Time-of-flight ion mobility spectrometry and differential mobility spectrometry: A comparative study of their efficiency in the analysis of halogenated compounds

The ion mobilities of halogenated aromatics which are of interest in environmental chemistry and process monitoring were characterized with field-deployable ion mobility spectrometers and differential mobility spectrometers. The dependence of mobility of gas-phase ions formed by atmospheric-pressure photoionization (APPI) on the electric field was determined for a number of structural isomers. The structure of the product ions formed was identified by investigations using the coupling of ion mobility spectrometry with mass spectrometry (APPI-IMS-MS) and APPI-MS. In contrast to conventional time-of-flight ion mobility spectrometry (IMS) with constant linear voltage gradients in drift tubes, differential mobility spectrometry (DMS) employs the field dependence of ion mobility. Depending on the position of substituents, differences in field dependence were established for the isomeric compounds in contrast to conventional IMS in which comparable reduced mobility values were detected for the isomers investigated. These findings permit the differentiation between most of the investigated isomeric aromatics with a different constitution using DMS.     

Modeling of ion processes in atmospheric pressure matrix-assisted laser desorption/ionisation

Atmospheric pressure matrix-assisted laser desorption/ionization (AP-MALDI) has proven a convenient and rapid method for ion production in the mass spectrometric analysis of biomolecules. This technique, like other atmospheric pressure ionization methods, suffers from ion loss during ion transmission from the atmosphere into the vacuum of the mass spectrometer. In this work, a simple model describing ion formation and ion motion towards the inlet capillary of the mass spectrometer is described. Both the gas flow and electric field near the MALDI plate were numerically calculated using the boundary element method (BEM). The ions were moving along with the gas flow and drifting in the electric field in accordance with their ion mobility properties. The ion signal dependence on an electric field strength obtained in the proposed model correlates well with experimental results.     

Ion mobility spectrometry detection for gas chromatography

The hyphenated analytical method in which ion mobility spectrometry (IMS) is coupled to gas chromatography (GC) provides a versatile alternative for the sensitive and selective detection of compounds after chromatographic separation. Providing compound selectivity by measuring unique gas phase mobilities of characteristic analyte ions, the separation and detection process of gas chromatography-ion mobility spectrometry (GC-IMS) can be divided into five individual steps: sample introduction, compound separation, ion generation, ion separation and ion detection. The significant advantage of a GC-IMS detection is that the resulting interface can be tuned to monitor drift times/ion mobilities (as a mass spectrometer (MS) can be tuned to monitor ion masses) of interest, thereby tailoring response characteristics to fit the need of a given separation problem. Because IMS separates ions based on mobilities rather than mass, selective detection among compounds of the same mass but different structures are possible. The most successful application of GC-IMS to date has been in the international space station. With the introduction of two-dimensional gas chromatography (2D-GC), and a second type of mobility detector, namely differential mobility spectrometry (DMS), GC prior to mobility measurements can now produce four-dimensional analytical information. Complex mixtures in difficult matrices can now be analyzed. This review article is intended to provide an overview of the GC-IMS/DMS technique, recent developments, significant applications, and future directions of the technique.     

Tandem differential mobility spectrometry with chemical modification of ions

A tandem ion mobility spectrometer with two sequential differential mobility spectrometry (DMS) drift tubes and with detectors at ambient pressure is described and modes of operation are demonstrated. Separate but coordinated electronic control for each drift tube allows several modes of operation including: all ions passing; compensation voltage (CV) scanning; and ion selection over a narrow CV range. Any of these modes can be applied to each drift tube allowing several combinations of analytical measurements, analogous to tandem mass spectrometry, with ions entered into a gas atmosphere containing reagents between the mobility regions. Ions may be changed by cluster or displacement reactions and characterized in the second DMS analyzer. Proton bound dimers of compounds appearing near 0?V CV in DMS1 were isolated in DMS1, introduced into 1?% isopropanol vapors, and resolved at characteristic CV values in the DMS2. This is achieved with analyzer dimensions little greater than a single DMS instrument.     

Modelling a P-FAIMS with multiphysics FEM

A micro Planar high-Field Asymmetric waveform Ion Mobility Spectrometer (P-FAIMS) operating at ambient pressure and temperature has been simulated using COMSOL Multiphysics software. P-FAIMS is based on ion gas-phase separation due to the dependence of ion mobility with electric field. Ions are selected by a DC voltage characteristic of each ion kind. Physics of ion behaviour in high electric fields conditions is well known but not the chemistry behind ion reactions and kinetics. The aim of this work is the modelling of different kind of ions in a P-FAIMS having account of the main factors involved in their movement in the drift tube. Simulations of vapour phase ions of three compounds have been studied for different values of drift electric field amplitude to gas number density (E/N) ratio: protonated water clusters H⁺(H₂O) _n and O₂^-(H₂O)_n{{\rm O}_{2}^{-}({\rm H}_{2}{\rm O})_{n}} ions obtained in air, and a chemical warfare agent simulant DMMPH⁺ that emulates gas sarin. Ions were selected due to simulation needs of experimental data of the main quantities involved in the definition of ions mobilities. Results show that simulations of ions behaviour in a P-FAIMS are possible with COMSOL Multiphysics software and that the time and intensity at which ions are detected are in good agreement with experimental data from literature.     

Laserspray ionization (LSI) ion mobility spectrometry (IMS) mass spectrometry

A simple device is described for desolvation of highly charged matrix/analyte clusters produced by laser ablation leading to multiply charged ions that are analyzed by ion mobility spectrometry-mass spectrometry. Thus, for example, highly charged ions of ubiquitin and lysozyme are cleanly separated in the gas phase according to size and mass (shape and molecular weight) as well as charge using Tri-Wave ion mobility technology coupled to mass spectrometry. This contribution confirms the mechanistic argument that desolvation is necessary to produce multiply charged matrix-assisted laser desorption/ionization (MALDI) ions and points to how these ions can be routinely formed on any atmospheric pressure mass spectrometer.     

Improving mass spectrometer sensitivity using a high-pressure electrodynamic ion funnel interface

We report on a new electrodynamic ion funnel that operates at a pressure of 30 torr with no loss of ion transmission. The enhanced performance compared with previous ion funnel designs optimized for pressures of <5 torr was achieved by reducing the ion funnel capacitance and increasing the RF drive frequency (1.7 MHz) and amplitude (100-170 V peak-to-peak). No degradation of ion transmission was observed for pressures from 2 to 30 torr. The ability to operate at higher pressure enabled a new tandem ion funnel mass spectrometer interface design that can accommodate a greater gas load (e.g., from an ESI source). When combined with a multicapillary inlet, the interface provided more efficient introduction of ions, resulting in a significant enhancement in mass spectrometer sensitivity and detection limits.     

Super-Atmospheric Pressure Electrospray Ion Source: Applied to Aqueous Solution

This is a follow-up paper of our previous report on an ion source, which was operated at an operating pressure higher than the atmospheric pressure. Besides having more working gas for desolvation, the reduction of mean free path of electrons in a higher pressure environment increases the threshold voltage for gaseous breakdown, thus enabling a stable electrospray for the sample solution with high surface tension without the occurrence of electric discharge. In our previous work, the ion source was not coupled directly to the mass spectrometer and significant amount of ions were lost before entering the vacuum of the mass spectrometer. In this paper, we report the new design of our second prototype in which, by using a modified ion transport capillary, the pressurized ESI ion source was coupled directly to the first pumping stage of the mass spectrometer without additional modification on the vacuum pumping system. Demonstrations of the new ion source on the sensitive detection of native proteins from aqueous solution in both positive and negative ion modes are presented.     

A segmented radiofrequency-only quadrupole collision cell for measurements of ion collision cross section on a triple quadrupole mass spectrometer

The gas collision cell of a triple quadrupole mass spectrometer has been modified to consist of ten short quadrupole rod segments that allow an axial field to be applied to the cell in order to make measurements of ion mobility. The radiofrequency (rf)-quadrupole field provides effective radial confinement that greatly reduces diffusional losses at low pressure. The mobilities of mass-selected ions from an ionspray source have been measured at a pressure of 8 × 10^?3 torr at electric fields of 0. 1 to 3 V/cm, and used to calculate the collision cross sections of the ions. The measured cross sections compare well with those measured by other techniques.     

Ion mobility spectrometer—field asymmetric ion mobility spectrometer-mass spectrometry

Since the development of electrospray ionization (ESI) for ion mobility spectrometry mass spectrometry (IMMS), IMMS have been extensively applied for characterization of gas-phase bio-molecules. Conventional ion mobility spectrometry (IMS), defined as drift tube IMS (DT-IMS), is typically a stacked ring design that utilizes a low electric field gradient. Field asymmetric ion mobility spectrometry (FAIMS) is a newer version of IMS, however, the geometry of the system is significantly different than DT-IMS and data are collected using a much higher electric field. Here we report construction of a novel ambient pressure dual gate DT-IMS coupled with a FAIMS system and then coupled to a quadrupole ion trap mass spectrometer (QITMS) to form a hybrid three-dimensional separation instrument, DT-IMS-FAIMS-QITMS. The DT-IMS was operated at ~3 Townsend (electric field/number density (E/N) or (Td)) and was coupled in series with a FAIMS, operated at ~80 Td. Ions were mobility-selected by the dual gate DT-IMS into the FAIMS and from the FAIMS the ions were detected by the QITMS for as either MS or MSⁿ. The system was evaluated using cocaine as an analytical standard and tested for the application of separating three isomeric tri-peptides: tyrosine-glycine-tryptophan (YGW), tryptophan-glycine-tyrosine (WGY) and tyrosine-tryptophan-glycine (YWG). All three tri-peptides were separated in the DT-IMS dimension and each had one mobility peak. The samples were partially separated in the FAIMS dimension but two conformation peaks were detected for the YWG sample while YGW and WGY produced only one peak. Ion validation was achieved for all three samples using QITMS.     

A Mass-Selective Variable-Temperature Drift Tube Ion Mobility-Mass Spectrometer for Temperature Dependent Ion Mobility Studies

A hybrid ion mobility-mass spectrometer (IM-MS) incorporating a variable-temperature (80–400 K) drift tube is presented. The instrument utilizes an electron ionization (EI) source for fundamental small molecule studies. Ions are transferred to the IM-MS analyzer stages through a quadrupole, which can operate in either broad transmission or mass-selective mode. Ion beam modulation for the ion mobility experiment is accomplished by an electronic shutter gate. The variable-temperature ion mobility spectrometer consists of a 30.2 cm uniform field drift tube enclosed within a thermal envelope. Subambient temperatures down to 80 K are achievable through cryogenic cooling with liquid nitrogen, while elevated temperatures can be accessed through resistive heating of the envelope. Mobility separated ions are mass analyzed by an orthogonal time-of-flight (TOF) mass spectrometer. This report describes the technological considerations for operating the instrument at variable temperature, and preliminary results are presented for IM-MS analysis of several small mass ions. Specifically, mobility separations of benzene fragment ions generated by EI are used to illustrate significantly improved (greater than 50%) ion mobility resolution at low temperatures resulting from decreased diffusional broadening. Preliminary results on the separation of long-lived electronic states of Ti⁺ formed by EI of TiCl₄ and hydration reactions of Ti⁺ with residual water are presented.     

Table of reduced mobility values from ambient pressure ion mobility spectrometry

This review presents a list of reduced ion mobilities that have been measured under ambient pressure conditions and reported in the open literature during the 16-year period of 1970-1985. Ions reported are listed in order of increasing reduced mobility along with the name of the parent compound, the reduced mobility of additional product ions observed in the spectrum, the carrier and drift gases, the temperature of the drift region and the reference where the data were reported. Also, ions that have been identified by mass spectrometry are indicated with an asterisk.     

Numerical simulation of Monte Carlo ion transport at atmospheric pressure within improved air amplifier geometry

A computational fluid dynamics (CFD) software package ANSYS Fluent was employed for simulation of ion transport at atmospheric pressure between a nano-electrospray ionization (nano-ESI) emitter and the mass spectrometer (MS) sampling inlet tube inside an improved air amplifier device incorporating a radiofrequency ion funnel. The flow field, electric field and the ion trajectory calculations were carried out in separate steps. Parallelized user-defined functions were written to accommodate the additional static and transient electric fields and the elastic ion-gas collisions with the Monte Carlo hard-sphere simulation abilities within Fluent’s environment. The ion transmission efficiency from a nano-ESI emitter to the MS sampling inlet was evaluated for different air amplifier and ion funnel operating conditions by tracking 250 sample reserpine ions. Results show that the high velocity gas stream and the external electric field cause a rapid acceleration of the ion beam and its dispersion along the centreline of the air amplifier which leads to reduction of the space-charge effect and the beam divergence. The radiofrequency potential applied to the ion funnel contributed to additional ion focusing.     

Acetone and perdeuterated acetone in UV-IMS

Measuring a mixture of acetone and perdeuterated acetone (acetone-d6) with an ultra-high resolution drift time ion mobility spectrometer (resolving power of R_p?=?235) and ultraviolet ionization (10.6 eV) at ambient pressure reveals three separated peaks. Two of the peaks can easily be associated with acetone and perdeuterated acetone. In a former publication several findings indicated an exchange of a methyl group and the formation of a H₃COCD₃ related peak. In this work the formed ion species were analyzed with a high resolution drift time ion mobility time of flight mass spectrometer. The mass spectra clearly show the formation of three proton-bound dimer peaks whereas the peak between acetone and acetone-d6 is a proton-bound mixed dimer consisting of one acetone and one acetone-d6 molecule.     

Using a Buffer Gas Modifier to Change Separation Selectivity in Ion Mobility Spectrometry

The mobilities of a set of common α-amino acids, four tetraalkylammonium ions, 2,4-dimethyl pyridine (2,4-lutidine), 2,6-di-tert-butyl pyridine (DTBP), and valinol were determined using electrospray ionization-ion mobility spectrometry-quadrupole mass spectrometry (ESI-IMS-QMS) while introducing 2-butanol into the buffer gas. The mobilities of the test compounds decreased by varying extents with 2-butanol concentration in the mobility spectrometer. When the concentration of 2-butanol increased from 0.0 to 6.8 mmol m(-3) (2.5×10(2) ppmv), percentage reductions in mobilities were: 13.6% (serine), 12.2% (threonine), 10.4% (methionine), 10.3% (tyrosine), 9.8% (valinol), 9.2% (phenylalanine), 7.8% (tryptophan), 5.6% (2,4-lutidine), 2.2% (DTBP), 1.0% (tetramethylammonium ion, TMA, and tetraethylammonium ion, TEA), 0.0% (tetrapropylammonium ion, TPA), and 0.3% (tetrabutylammonium ion, TBA). These variations in mobility depended on the size and steric hindrance on the charge of the ions, and were due to formation of large ion-2-butanol clusters. This selective variation in mobilities was applied to the resolution of a mixture of compounds with similar reduced mobilities such as serine and valinol, which overlapped in N(2)-only buffer gas in the IMS spectrum. The relative insensitivity of tetraalkylammonium ions and DTBP to the introduction of 2-butanol into the buffer gas was explained by steric hindrance of the four alkyl substituents in tetraalkylammonium ions and the two tert-butyl groups in DTBP, which shielded the positive charge of the ion from the attachment of 2-butanol molecules. Low buffer gas temperatures (100 °C) produced the largest reductions in mobilities by increasing ion-2-butanol interactions and formation of clusters; high temperatures (250 °C) prevented the formation of clusters, and no reduction in ion mobility was obtained with the introduction of 2-butanol into the buffer gas. Low temperatures and high concentrations of 2-butanol produced a series of ion clusters with one to three 2-butanol molecules in compounds without steric hindrance. Clusters of two and three molecules of 2-butanol were also visible. Ligand-saturation on the positive ions with 2-butanol molecules occurred at high concentrations of modifier (6.8 mmol m(-3) at 150°C); when saturated, no further reduction in mobility occurred when 2-butanol was introduced into the buffer gas.     

A novel fourier transform ion cyclotron resonance mass spectrometer with improved ion trapping and detection capabilities

A novel Fourier transform ion cyclotron resonance (FT-ICR) mass spectrometer has been developed for improved biomolecule analysis. A flared metal capillary and an electrodynamic ion funnel were installed in the source region of the instrument for improved ion transmission. The transfer quadrupole is divided into 19 segments, with the capacity for independent control of DC voltage biases for each segment. Restrained ion population transfer (RIPT) is used to transfer ions from the ion accumulation region to the ICR cell. The RIPT ion guide reduces mass discrimination that occurs as a result of time-of-flight effects associated with gated trapping. Increasing the number of applied DC bias voltages from 8 to 18 increases the number of ions that are effectively trapped in the ICR cell. The RIPT ion guide with a novel voltage profile applied during ion transfer provides a 3- to 4-fold increase in the number of ions that are trapped in the ICR cell compared with gated trapping for the same ion accumulation time period. A novel ICR cell was incorporated in the instrument to reduce radial electric field variation for ions with different z-axis oscillation amplitudes. With the ICR cell, called trapping ring electrode cell (TREC), we can tailor the shape of the trapping electric fields to reduce dephasing of coherent cyclotron motion of an excited ion packet. With TREC, nearly an order of magnitude increase in sensitivity is observed. The performance of the instrument with the combination of RIPT, TREC, flared inlet, and ion funnel is presented.