Trends in alkyl substituent effects on nucleophilic reactions of carbonyl compounds: gas phase reactions between ammonia and R1R2COCH3+ oxonium ions

The reactivity of carbonyl substituted methyl oxonium ions (R1R2COCH3+) towards ammonia has been investigated using an FT-ICR mass spectrometer and ab initio calculations. The monosubstituted ions (R1 = H; R2 = H, CH3, C2H5 and i-C3H7) show different reaction patterns with variable degree of: (1) nucleophilic substitution, (2) addition-elimination and (3) proton transfer, when reacted with ammonia. In all cases addition-elimination dominates over nucleophilic substitution, and the observed reactions are slow. The trends in reactivity are consistent with the alkyl group's electronic properties, as expressed by a single parameter linear or slightly non-linear model.     

Competing elimination and substitution reactions of simple acyclic disulfides

MP2/aug-cc-pVDZ and B3LYP/cc-pVDZ calculations of the reactions of CH3SSR (R = H or CH3) with fluoride, hydroxide or allyl anion in the gas-phase were performed to determine the mechanism for both elimination and substitution reactions. The elimination reactions were shown to follow the E2 mechanism. The substitution reactions with hydroxide and fluoride proceed by the addition-elimination mechanism, but those with allyl anion proceed by the SN2 mechanism. The elimination reactions with F- and HO- are preferred to the substitution reactions, while allyl anion prefers the substitution route.     

Theoretical study on the identity ion pair SN2 reactions of LiX with CH3SX (X=Cl, Br, and I): structure, mechanism, and potential energy surface

Three archetypal ion pair nucleophilic substitution reactions at the methylsulfenyl sulfur atom LiX+CH3SX-->XSCH3+LiX (X=Cl, Br, and I) are investigated by the modified Gaussian-2 theory. Including lithium cation in the anionic models makes the ion pair reactions proceed along an SN2 mechanism, contrary to the addition-elimination pathway occurring in the corresponding anionic nucleophilic substitution reactions X-+CH3SX-->XSCH3+X-. Two reaction pathways for the ion pair SN2 reactions at sulfur, inversion and retention, are proposed. Results indicate the inversion pathway is favorable for all the halogens. Comparison of the transition structures and energetics for the ion pair SN2 at sulfur with the potential competition ion pair SN2 reactions at carbon LiX+CH3SX-->XCH3+LiXS shows that the SN2 reactions at carbon are not favorable from the viewpoints of kinetics and thermodynamics.     

Nucleophilic identity substitution reactions. The reaction between ammonia and protonated amines

The gas phase reactions between NH3 and the protonated amines MeNH3+, EtNH3+, PriNH3+, and Bu(t)nH3+ have been studied by high level ab initio methods. Mass spectrometric experiments yielded no significant reaction products; this result being consistent with the calculated reaction barriers. The potential energy profiles for both nucleophilic substitution (SN2) and elimination (E2) pathways have been investigated. Both back side Walden inversion (SNB) and front side (SNF) nucleophilic reaction profiles have been generated. The SNB reaction barriers are found to be higher for the more alkyl substituted reaction centres. Reaction barrier trends have been analysed and compared with the results of a similar study of the H2O-ROH2+ system (R = Me, Et, Pri, and Bu(t)).     

分子内氮原子上亲核取代反应的理论研究

Using the -CHR-(CH2)3-NFCH3(R=H, CH3, CH2CF3, CHO, COCH3) as the computational model, the two possible intramolecular reactions, nucleophilic substitution on nitrogen and elimination reaction, were studied at the theoretical level of MP2(full)/6-31+G(d,p). The results indicate that the elimination mechanism, when the -CHR radical is more basic (R=H, CH3, CH2CF3) leading to linear products R-CH2-(CH2)3N=CH2 is preferred. In contrast, electro-withdrawing groups CHO and COCH3 on the attacking site will favor the intramolecular nucleophilic substitution of nitrogen and form 5-membered heterocyclic compounds. These theoretical predictions agree with the available experiments.     

Theoretical dynamic studies on the reactions of CH3C(O)CH3-nCl(n) (n = 0-3) with the chlorine atom

The theoretical investigations were performed on the reaction mechanisms for the title reactions CH(3)C(O)CH(3) + Cl --> products (R1), CH(3)C(O)CH(2)Cl + Cl --> products (R2), CH(3)C(O)CHCl(2) + Cl --> products (R3), and CH(3)C(O)CCl(3) + Cl --> products (R4) by ab initio direct dynamics approach. Two different reaction channels have been found: abstract of the H atom from methyl (--CH(3)) group or chloromethyl (--CH(3-n)Cl(n)) group of chloroacetone and addition of a Cl atom to the carbon atom of the carbonyl group of chloroacetone followed by methyl or chloromethyl eliminations. Because of the higher potential energy barrier, the contribution of addition-elimination reaction pathway to the total rate constants is very small and thus this pathway is insignificant in atmospheric conditions. The rate constants for the H-abstraction reaction channels are evaluated by using canonical variational transition state theory incorporating with the small-curvature tunneling correction. Theoretical overall rate constants are in good agreement with the available experimental values and decrease in the order of k(1) > k(2) > k(3) > k(4). The results indicate that for halogenated acetones the substitution of halogen atom (F or Cl) leads to the decrease in the C--H bond reactivity and more decrease of reactivity is caused by F-substitution.     

Nucleophilic substitution at silicon (SN2@Si) via a central reaction barrier

It is textbook knowledge that nucleophilic substitution at carbon (SN2@C) proceeds via a central reaction barrier which disappears in the corresponding nucleophilic substitution reaction at silicon (SN2@Si). Here, we address the question why the central barrier disappears from SN2@C to SN2@Si despite the fact that these processes are isostructural and isoelectronic. To this end, we have explored and analyzed the potential energy surfaces (PES) of various Cl-+CR3Cl (R=H, CH3) and Cl-+SiR3Cl model reactions (R=H, CH3, C2H5, and OCH3). Our results show that the nature of the SN2 reaction barrier is in essence steric, but that it can be modulated by electronic factors. Thus, simply by increasing the steric demand of the substituents R around the silicon atom, the SN2@Si mechanism changes from its regular single-well PES (with a stable intermediate transition complex, TC), via a triple-well PES (with a pre- and a post-TS before and after the central TC), to a double-well PES (with a TS; R=OCH3), which is normally encountered for SN2@C reactions.     

Reactions of a platinum(III) dimeric complex with alkynes in water: novel approach to alpha-aminoketone, alpha-iminoketone, and alpha,beta-diimine via ketonyl-Pt(III) dinuclear complexes

Reaction of the platinum(III) dimeric complex [Pt(2)(NH(3))(4)((CH(3))(3)CCONH)(2)(NO(3))(2)](NO(3))(2) (1), prepared in situ by the oxidation of the platinum blue complex [Pt(4)(NH(3))(8)((CH(3))(3)CCONH)(4)](NO(3))(5) (2) with Na(2)S(2)O(8), with terminal alkynes CH[triple bond]CR (R = (CH(2))(n)CH(3) (n = 2-5), (CH(2))(n)CH(2)OH (n = 0-2), CH(2)OCH(3), and Ph), in water gave a series of ketonyl-Pt(III) dinuclear complexes [Pt(2)(NH(3))(4)((CH(3))(3)CCONH)(2)(CH(2)COR)](NO(3))(3) (3, R = (CH(2))(2)CH(3); 4, R = (CH(2))(3)CH(3); 5, R = (CH(2))(4)CH(3); 6, R = (CH(2))(5)CH(3); 7, R = CH(2)OH; 8, R = CH(2)CH(2)OH; 9, R = (CH(2))(2)CH(2)OH; 10, R = CH(2)OCH(3); 11, R = Ph). Internal alkyne 2-butyne reacted with 1 to form the complex [Pt(2)(NH(3))(4)((CH(3))(3)CCONH)(2)(CH(CH(3))COCH(3))](NO(3))(3) (12). These reactions show that Pt(III) reacts with alkynes to give various ketonyl complexes. Coordination of the triple bond to the Pt(III) atom at the axial position, followed by nucleophilic attack of water and hydrogen shift from the enol to keto form, would be the mechanism. The structures of complexes 3.H(2)O, 7.0.5C(3)H(4)O, 9, 10, and 12 have been confirmed by X-ray diffraction analysis. A competitive reaction between equimolar 1-pentyne and 1-pentene toward 1 produced complex 3 and [Pt(2)(NH(3))(4)((CH(3))(3)CCONH)(2)(CH(2)CH(OH)CH(2)CH(2)CH(3))](NO(3))(3) (14) at a molar ratio of 9:1, suggesting that alkyne is more reactive than alkene. The ketonyl-Pt(III) dinuclear complexes are susceptible to nucleophiles, such as amines, and the reactions with secondary and tertiary amines give the corresponding alpha-amino-substituted ketones and the reduced Pt(II) complex quantitatively. In the reactions with primary amines, the once formed alpha-amino-substituted ketones were further converted to the iminoketones and diimines. The nucleophilic attack at the ketonyl group of the Pt(III) complexes provides a convenient means for the preparation of alpha-aminoketones, alpha-iminoketones, and diimines from the corresponding alkynes and amines.     

硫原子上亲核取代反应的密度泛函理论研究

在B3LYP/6-311 G(2df,p)的水平上,对反应X- CH3SCl(X=F,Cl,Br,I)进行了理论研究.计算结果表明:X-(X=Cl,Br,I)与CH3SCl作用时,实际发生的是在硫原子上而不是在碳原子上的亲核取代反应,而且属于加成-消去机理.但是F-与CH3SCl作用则容易发生脱质子反应.     

Free energies for degradation reactions of 1,2,3-trichloropropane from ab initio electronic structure theory

Electronic structure methods were used to calculate the gas and aqueous phase reaction energies for reductive dechlorination (i.e., hydrogenolysis), reductive β-elimination, dehydrochlorination, and nucleophilic substitution by OH? of 1,2,3-trichloropropane. The thermochemical properties ΔH(f)°(298.15 K), S°(298.15 K, 1 bar), and ΔG(S)(298.15 K, 1 bar) were calculated by using ab initio electronic structure calculations, isodesmic reactions schemes, gas-phase entropy estimates, and continuum solvation models for 1,2,3-trichloropropane and several likely degradation products: CH3?CHCl?CH2Cl, CH2Cl?CH2?CH2Cl, C?H2?CHCl?CH2Cl, CH2Cl?C?H?CH2Cl, CH2═CCl?CH2Cl, cis-CHCl═CH?CH2Cl, trans-CHCl═CH?CH2Cl, CH2═CH?CH2Cl, CH2Cl?CHCl?CH2OH, CH2Cl?CHOH?CH2Cl, CH2═CCl?CH2OH, CH2═COH?CH2Cl, cis-CHOH═CH?CH2Cl, trans-CHOH═CH?CH2Cl, CH(═O)?CH2?CH2Cl, and CH3?C(═O)?CH2Cl. On the basis of these thermochemical estimates, together with a Fe(II)/Fe(III) chemical equilibrium model for natural reducing environments, all of the reactions studied were predicted to be very favorable in the standard state and under a wide range of pH conditions. The most favorable reaction was reductive β-elimination (ΔG(rxn)° ≈ ?32 kcal/mol), followed closely by reductive dechlorination (ΔG(rxn)° ≈ ?27 kcal/mol), dehydrochlorination (ΔG(rxn)° ≈ ?27 kcal/mol), and nucleophilic substitution by OH? (ΔG(rxn)° ≈ ?25 kcal/mol). For both reduction reactions studied, it was found that the first electron-transfer step, yielding the intermediate C?H2?CHCl?CH2Cl and the CH2Cl?C?H?CH2Cl species, was not favorable in the standard state (ΔG(rxn)° ≈ +15 kcal/mol) and was predicted to occur only at relatively high pH values. This result suggests that reduction by natural attenuation is unlikely.     

Gas phase reactions of NH2Cl with anionic nucleophiles: Nucleophilic substitution at neutral nitrogen

Reactions of chloramine, NH2Cl, with HO-, RO- (R = CH3, CH3CH2, CH3CH2CH2, C6H5CH2, CF3CH2), F- , HS- , and Cl- have been studied in the gas phase using the selected ion flow tube technique. Nucleophilic substitution (S(N)2) at nitrogen to form Cl- has been observed for all the nucleophiles. The reactions are faster than the corresponding S(N)2 reactions of methyl chloride; the chloramine reactions take place at nearly every collision when the reaction is exothermic. The thermoneutral identity S(N)2 reaction of NH2Cl with Cl-, which occurs approximately once in every 100 collisions, is more than two orders of magnitude faster than the analogous reaction of CH3Cl. The significantly enhanced S(N)2 reactivity of NH2Cl is consistent with a previous theoretical prediction that the barrier height for the S(N)2 identity reaction at nitrogen is negative relative to the energy of the reactants, whereas this barrier height for reaction at carbon is positive. Competitive proton abstraction to form NHCl- has also been observed with more highly basic anions (HO-, CH3O-, and CH3CH2O-), and this is the major reaction channel for HO- and CH3O-. Acidity bracketing determines the heat of deprotonation of NH2Cl as 374.4 +/- 3.0 kcal mol(-1).     

Oxidative nucleophilic substitution of hydrogen versus ring-opening in the reaction of 4-R-2-nitrothiophenes with amines. The crucial effect of 4-alkyl groups

4-Alkyl-2-nitrothiophenes [10: R = CH3, CH(OH)CH3, CH(OCH3)CH3] react with secondary aliphatic amines, in the presence of AgNO3, to give 3-alkyl-2-amino-5-nitrothiophenes (12) through an oxidative nucleophilic substitution of hydrogen (ONSH) of synthetic interest. This behavior is in striking contrast with that of the parent 2-nitrothiophene (6), which was found to undergo ring-opening in analogous reaction conditions. A possible rationale for the crucial effect of alkyl groups is suggested, grounded also on a study of the corresponding Meisenheimer-like adducts.     

Base-induced decomposition of alkyl hydroperoxides in the gas phase. Part 3. Kinetics and dynamics in HO- + CH3OOH, C2H5OOH, and tert-C4H9OOH reactions

The E(CO)2 elimination reactions of alkyl hydroperoxides proceed via abstraction of an alpha-hydrogen by a base: X(-) + R(1)R(2)HCOOH --> HX + R(1)R(2)C=O + HO(-). Efficiencies and product distributions for the reactions of the hydroxide anion with methyl, ethyl, and tert-butyl hydroperoxides are studied in the gas phase. On the basis of experiments using three isotopic analogues, HO(-) + CH3OOH, HO(-) + CD3OOH, and H(18)O(-) + CH3OOH, the overall intrinsic reaction efficiency is determined to be 80% or greater. The E(CO)2 decomposition is facile for these methylperoxide reactions, and predominates over competing proton transfer at the hydroperoxide moiety. The CH3CH2OOH reaction displays a similar E(CO)2 reactivity, whereas proton transfer and the formation of HOO(-) are the exclusive pathways observed for (CH3)3COOH, which has no alpha-hydrogen. All results are consistent with the E(CO)2 mechanism, transition state structure, and reaction energy diagrams calculated using the hybrid density functional B3LYP approach. Isotope labeling for HO(-) + CH3OOH also reveals some interaction between H2O and HO(-) within the E(CO)2 product complex [H2O...CH2=O...HO(-)]. There is little evidence, however, for the formation of the most exothermic products H2O + CH2(OH)O(-), which would arise from nucleophilic condensation of CH2=O and HO(-). The results suggest that the product dynamics are not totally statistical but are rather direct after the E(CO)2 transition state. The larger HO(-) + CH3CH2OOH system displays more statistical behavior during complex dissociation.     

Nucleophilic aromatic substitution on aryl-amido ligands promoted by oxidizing osmium(IV) centers

Addition of amine nucleophiles to acetonitrile solutions of the OsIV anilido complex TpOs(NHPh)Cl2 (1) [Tp = hydrotris(1-pyrazolyl)borate] gives products with derivatized anilido ligands, i.e., TpOs[NH-p-C6H4(N(CH2)5)]Cl2 (2) from piperidine and TpOs[NH-p-C6H4N(CH2)4]Cl2 (3) from pyrrolidine. These materials are formed in approximately 30% yield under anaerobic conditions, together with approximately 60% yields of the OsIII aniline complex TpOs(NH2Ph)Cl2 (5). Formation of the para-substituted materials 2 or 3 from 1 involves oxidative removal of two hydrogen atoms (two H+ and two e-). The oxidation can be accomplished by 1, forming 5, or by O2. Related reactions have been observed with other amines and with the 2-naphthylamido derivative, which gives an ortho-substituted product. Kinetic studies indicate an addition-elimination mechanism involving initial attack of the amine nucleophile on the anilido ligand. These are unusual examples of nucleophilic aromatic substitution of hydrogen. Ab initio calculations on 1 show that the LUMO has significant density at the ortho and para positions of the anilido ligand, resembling the LUMO of nitrobenzene. By analogy with nucleophilic aromatic substitution, 2 is quantitatively formed from piperidine and the p-chloroanilide TpOs(NH-p-C6H4Cl)Cl2 (7). Binding the anilide ligands to an oxidizing OsIV center thus causes a remarkable umpolung or inversion of chemical character from a typically electron-rich anilido to an electron-deficient aromatic functionality. This occurs because of the coupling of redox changes at the TpOsIV center with bond formation at the coordinated ligand.     

Electrophilic substitution reactions of metallabenzynes

The electrophilic substitution reactions of metallabenzynes Os(≡CC(R)═C(CH(3))C(R)═CH)Cl(2)(PPh(3))(2) (R = SiMe(3), H) were studied. These metallabenzynes react with electrophilic reagents, including Br(2), NO(2)BF(4), NOBF(4), HCl/H(2)O(2), and AlCl(3)/H(2)O(2) to afford the corresponding bromination, nitration, nitrosation, and chlorination products. The reactions usually occur at the C2 and C4 positions of the metallacycle. These observations support the notion that metallabenzynes exhibit aromatic properties.     

钠氟类硅烯插入RH键(R=F,OH,NH2,CH3)反应的理论研究

用密度泛函方法研究了钠氟类硅烯插入R_H键(R=F,OH,NH2,CH3)的反应机理.4个反应的机制类似,反应经历了类硅烯的亲电接近、亲核插入和取代三个阶段之后,形成中间络合物,4个反应的势垒分别为0.9,61.7,114.6和190.6kJ/mol(经零点能校正).中间络合物可以解离为取代硅烷和NaF,这是一个无过渡态的过程.反应能分别是-122.6,-96.3,-6.8和50.2kJ/mol.     

Carbon-carbon bond formation by radical addition-fragmentation reactions of O-alkylated enols

Alpha-tert-butoxystyrene [H2C=C(OBut)Ph] reacts with alpha-bromocarbonyl or alpha-bromosulfonyl compounds [R1R2C(Br)EWG; EWG =-C(O)X or -S(O2)X] to bring about replacement of the bromine atom by the phenacyl group and give R1R2C(EWG)CH2C(O)Ph. These reactions take place in refluxing benzene or cyclohexane with dilauroyl peroxide or azobis(isobutyronitrile) as initiator and proceed by a radical-chain mechanism that involves addition of the relatively electrophilic radical R1R2(EWG)C* to the styrene. This is followed by beta-scission of the derived alpha-tert-butoxybenzylic adduct radical to give But*, which then abstracts bromine from the organic halide to complete the chain. Alpha-1-adamantoxystyrene reacts similarly with R1R2C(Br)EWG, at higher temperature in refluxing octane using di-tert-amyl peroxide as initiator, and gives phenacylation products in generally higher yields than are obtained using alpha-tert-butoxystyrene. Simple iodoalkanes, which afford relatively nucleophilic alkyl radicals, can also be successfully phenacylated using alpha-1-adamantoxystyrene. O-Alkyl O-(tert-butyldimethylsilyl) ketene acetals H2C=C(OR)OTBS, in which R is a secondary or tertiary alkyl group, react in an analogous fashion with organic halides of the type R1R2C(Br)EWG to give the carboxymethylation products R1R2C(EWG)CH2CO2Me, after conversion of the first-formed silyl ester to the corresponding methyl ester. The silyl ketene acetals also undergo radical-chain reactions with electron-poor alkenes to bring about alkylation-carboxymethylation of the latter. For example, phenyl vinyl sulfone reacts with H2C=C(OBut)OTBS to afford ButCH2CH(SO2Ph)CH2CO2Me via an initial silyl ester. In a more complex chain reaction, involving rapid ring opening of the cyclopropyldimethylcarbinyl radical, the ketene acetal H2C=C(OCMe2C3H5-cyclo)OTBS reacts with two molecules of N-methyl- or N-phenyl-maleimide to bring about [3 + 2] annulation of one molecule of the maleimide, and then to link the bicyclic moiety thus formed to the second molecule of the maleimide via an alkylation-carboxymethylation reaction.     

Hydrogen/chlorine exchange reactions of gaseous carbanions

Gas-phase reactions of three typical carbanions CH(2)NO(2)(-), CH(2)CN(-), and CH(2)S(O)CH(3)(-) with the chloromethanes CH(2)Cl(2), CHCl(3), and CCl(4), examined by tandem mass spectrometry, show a novel hydrogen/chlorine exchange reaction. For example, reaction between the nitromethyl anion CH(2)NO(2)(-) and carbon tetrachloride CCl(4) forms the ion CHClNO(2)(-). The suggested reaction mechanism involves nucleophilic attack by CH(2)NO(2)(-) at the chlorine of CCl(4) followed by proton transfer within the resulting complex [CH(2)ClNO(2) + CCl(3)(-)] to form CHClNO(2)(-) and CHCl(3). Two other carbanions CH(2)CN(-) and CH(2)S(O)CH(3)(-) also undergo the novel hydrogen/chlorine exchange reactions with CCl(4) but to a much smaller extent, their higher nucleophilicities favoring competitive nucleophilic attack reactions. Proton abstraction is the exclusive pathway in the reactions of these carbanions with CHCl(3). While CH(2)CN(-) and CH(2)S(O)CH(3)(-) promote mainly proton abstraction and nucleophilic displacement in reactions with CH(2)Cl(2), CH(2)NO(2)(-) does not react.     

Nucleophilic identity substitution reactions. The reaction between hydrogen fluoride and protonated alkyl fluorides

The gas phase reactions between HF and the protonated alkyl fluorides MeFH+, EtFH+, Pr(i)FH+, and Bu(t)FH+ have been studied using ab initio methods. The potential energy profiles for both nucleophilic substitution (S(N)2) and elimination (E2) pathways have been investigated. Both backside Walden inversion and frontside nucleophilic substitution reaction profiles have been generated. Backside substitution is very favourable, but shows relatively little variation with the alkyl group. Frontside substitution reaction barriers are only slightly higher than the barrier for backside substitution for HF + MeFH+, and the difference in barrier heights for frontside and backside displacement seems negligible for the larger alkyl groups. Reaction barrier trends have been analysed and compared with the results of similar studies of the H2O/ROH2+ and NH3/RNH3+ systems (R = Me, Et, Pr(i), and Bu(t)). Compared to the two other classes, protonated fluorides have extreme structures which, with the exception of the Me substrate, are weakly bound complexes between an alkyl cation and HF. The results nourish the idea that nucleophilic substitution reactions are better understood in view of competition between frontside and backside substitution than from the traditional S(N)1/S(N)2 perspective.