Measuring distances between complex networks

A previously introduced concept of higher order neighborhoods in complex networks, [R.F.S. Andrade, J.G.V. Miranda, T.P. Lobão, Phys. Rev. E 73 (2006) 046101] is used to define a distance between networks with the same number of nodes. With such measure, expressed in terms of the matrix elements of the neighborhood matrices of each network, it is possible to compare, in a quantitative way, how far apart in the space of neighborhood matrices two networks are. The distance between these matrices depends on both the network topologies and the adopted node numberings. While the numbering of one network is fixed, a Monte Carlo algorithm is used to find the best numbering of the other network, in the sense that it minimizes the distance between the matrices. The minimal value found for the distance reflects differences in the neighborhood structures of the two networks that arise only from distinct topologies. This procedure ends up by providing a projection of the first network on the pattern of the second one. Examples are worked out allowing for a quantitative comparison for distances among distinct networks, as well as among distinct realizations of random networks.     

Network robustness to targeted attacks. The interplay of expansibility and degree distribution

We study the property of certain complex networks of being both sparse and highly connected, which is known as “good expansion” (GE). A network has GE properties if every subset S of nodes (up to 50% of the nodes) has a neighborhood that is larger than some “expansion factor” φ multiplied by the number of nodes in S. Using a graph spectral method we introduce here a new parameter measuring the good expansion character of a network. By means of this parameter we are able to classify 51 real-world complex networks — technological, biological, informational, biological and social — as GENs or non-GENs. Combining GE properties and node degree distribution (DD) we classify these complex networks in four different groups, which have different resilience to intentional attacks against their nodes. The simultaneous existence of GE properties and uniform degree distribution contribute significantly to the robustness in complex networks. These features appear solely in 14% of the 51 real-world networks studied here. At the other extreme we find that ∼40% of all networks are very vulnerable to targeted attacks. They lack GE properties, display skewed DD — exponential or power-law — and their topologies are changed more dramatically by targeted attacks directed at bottlenecks than by the removal of network hubs.     

Mapping dynamical systems onto complex networks

The objective of this study is to design a procedure to characterize chaotic dynamical systems, in which they are mapped onto a complex network. The nodes represent the regions of space visited by the system, while the edges represent the transitions between these regions. Parameters developed to quantify the properties of complex networks, including those related to higher order neighbourhoods, are used in the analysis. The methodology is tested on the logistic map, focusing on the onset of chaos and chaotic regimes. The corresponding networks were found to have distinct features that are associated with the particular type of dynamics that generated them.     

Network Entropy Based on Topology Configuration and Its Computation to Random Networks

A definition of network entropy is presented, and as an example, the relationship between the value of network entropy of ER network model and the connect probability p as well as the total nodes N is discussed. The theoretical result and the simulation result based on the network entropy of the ER network are in agreement well with each other. The result indicated that different from the other network entropy reported before, the network entropy defined here has an obvious difference from different type of random networks or networks having different total nodes. Thus, this network entropy may portray the characters of complex networks better. It is also pointed out that, with the aid of network entropy defined, the concept of equilibrium networks and the concept of non-equilibrium networks may be introduced, and a quantitative measurement to describe the deviation to equilibrium state of a complex network is carried out.     

An empirical study of Chinese language networks

Chinese is spoken by the largest number of people in the world, and it is regarded as one of the most important languages. In this paper, we explore the statistical properties of Chinese language networks (CLNs) within the framework of complex network theory. Based on one of the largest Chinese corpora, i.e. People’s Daily Corpus, we construct two networks (CLN1 and CLN2) from two different respects, with Chinese words as nodes. In CLN1, a link between two nodes exists if they appear next to each other in at least one sentence; in CLN2, a link represents that two nodes appear simultaneously in a sentence. We show that both networks exhibit small-world effect, scale-free structure, hierarchical organization and disassortative mixing. These results indicate that in many topological aspects Chinese language shapes complex networks with organizing principles similar to other previously studied language systems, which shows that different languages may have some common characteristics in their evolution processes. We believe that our research may shed some new light into the Chinese language and find some potentially significant implications.     

The emergence of scale-free networks with a seceding mechanism

In order to explore further the underlying mechanism of scale-free networks, we study stochastic secession as a mechanism for the creation of complex networks. In this evolution the network growth incorporates the addition of new nodes, the addition of new links between existing nodes, the deleting and rewiring of some existing links, and the stochastic secession of nodes. To random growing networks with preferential attachment, the model yields scale-free behavior for the degree distribution. Furthermore, we obtain an analytical expression of the power-law degree distribution with scaling exponent γ ranging from 1.1 to 9. The analytical expressions are in good agreement with the numerical simulation results.     

Unified index to quantifying heterogeneity of complex networks

Although recent studies have revealed that degree heterogeneity of a complex network has significant impact on the network performance and function, a unified definition of the heterogeneity of a network with any degree distribution is absent. In this paper, we define a heterogeneity index 0≤H<1 to quantify the degree heterogeneity of any given network. We analytically show the existence of an upper bound of H=0.5 for exponential networks, thus explain why exponential networks are homogeneous. On the other hand, we also analytically show that the heterogeneity index of an infinite power law network is between 1 and 0.5 if and only if its degree exponent is between 2 and 2.5. We further show that for any power law network with a degree exponent greater than 2.5, there always exists an exponential network such that both networks have the same heterogeneity index. This may help to explain why 2.5 is a critical degree exponent for some dynamic behaviors on power law networks.     

A Law of Gravitation for Complex Networks

Inspiring Newton＇s law of universal gravitation and empirical studies, we propose a concept of virtual network mass and network gravitational force in complex networks. Then a network gravitational model for complex networks is presented. In the model, each node in the network is described with its position, edges （links） and virtual network mass. The proposed model is examined by experiments to show its potential applications.     

Comparison of co-occurrence networks of the Chinese and English languages

Co-occurrence networks of Chinese characters and words, and of English words, are constructed from collections of Chinese and English articles, respectively. Four types of collections are considered, namely, essays, novels, popular science articles, and news reports. Statistical parameters of the networks are studied, including diameter, average degree, degree distribution, clustering coefficient, average shortest path length, as well as the number of connected subnetworks. It is found that the character and word networks of each type of article in the Chinese language, and the word network of each type of article in the English language all exhibit scale-free and small-world features. The statistical parameters of these co-occurrence networks are compared within the same language and across the two languages. This study reveals some commonalities and differences between Chinese and English languages, and among the four types of articles in each language from a complex network perspective. In particular, it is shown that expressions in English are briefer than those in Chinese in a certain sense.     

Cumulative Laws, Team Assembling Mechanisms Determining Network Structure

A number of researching works have shed light on the field of complex networks recently. We investigate a wide range of real-world networks and find several interesting phenomena. Firstly, almost all of these networks evolve by overlapping new small graphs on former networks. Secondly, not only the degree sequence of the mature network follows a power-law distribution, but also the distribution of the cumulative occurrence times during the growing process are revealed to have a heavy tail. Existing network evolving models do not provide interpretation to these phenomena. We suggest a model based on the team assembling mechanism, which is extracted from the growing processes of real-world networks and requires simple parameters, and produces networks exhibiting these properties observed in the present study and in previous works.     

Local affinity in heterogeneous growing networks

In this paper we present a study of the influence of local affinity in heterogeneous preferential attachment (PA) networks. Heterogeneous PA models are a generalization of the Barabási-Albert model to heterogeneous networks, where the affinity between nodes biases the attachment probability of links. Threshold models are a class of heterogeneous PA models where the affinity between nodes is inversely related to the distance between their states. We propose a generalization of threshold models where network nodes have individual affinity functions, which are then combined to yield the affinity of each potential interaction. We analyze the influence of the affinity functions in the topological properties averaged over a network ensemble. The network topology is evaluated through the distributions of connectivity degrees, clustering coefficients and geodesic distances. We show that the relaxation of the criterion of a single global affinity still leads to a reasonable power-law scaling in the connectivity and clustering distributions under a wide spectrum of assumptions. We also show that the richer behavior of the model often exhibits a better agreement with the empirical observations on real networks.     

Modeling network growth with assortative mixing

We propose a model of an underlying mechanism responsible for the formation of assortative mixing in networks between “similar” nodes or vertices based on generic vertex properties. Existing models focus on a particular type of assortative mixing, such as mixing by vertex degree, or present methods of generating a network with certain properties, rather than modeling a mechanism driving assortative mixing during network growth. The motivation is to model assortative mixing by non-topological vertex properties, and the influence of these non-topological properties on network topology. The model is studied in detail for discrete and hierarchical vertex properties, and we use simulations to study the topology of resulting networks. We show that assortative mixing by generic properties directly drives the formation of community structure beyond a threshold assortativity of r ∼0.5, which in turn influences other topological properties. This direct relationship is demonstrated by introducing a new measure to characterise the correlation between assortative mixing and community structure in a network. Additionally, we introduce a novel type of assortative mixing in systems with hierarchical vertex properties, from which a hierarchical community structure is found to result. Electronic supplementary material Supplementary Online Material     

Better synchronizability predicted by a new coupling method

In this paper, inspired by the idea that different nodes should play different roles in network synchronization, we bring forward a coupling method where the coupling strength of each node depends on its neighbors' degrees. Compared with the uniform coupled method and the recently proposed Motter-Zhou-Kurths method, the synchronizability of scale-free networks can be remarkably enhanced by using the present coupling method, and the highest network synchronizability is achieved at β=1 which is similar to a method introduced in [AIP Conf. Proc. 776, 201 (2005)].     

Topological properties of stock networks based on minimal spanning tree and random matrix theory in financial time series

We investigated the topological properties of stock networks constructed by a minimal spanning tree. We compared the original stock network with the estimated network; the original network is obtained by the actual stock returns, while the estimated network is the correlation matrix created by random matrix theory. We found that the consistency between the two networks increases as more eigenvalues are considered. In addition, we suggested that the largest eigenvalue has a significant influence on the formation of stock networks.     

Dynamic domain networks

A model for a dynamic network consisting of changing local interactions is presented in this work. While the network maintains solely local connections, certain properties known only to Small World Networks may be extracted due to the dynamic nature of the model. At each time step the individuals are grouped into clusters creating neighborhoods or domains of fully connected agents. The boundaries of these domains change in time, corresponding to a situation where the links between individuals are dynamic only throughout the history of the network. A question that we pose is whether our model, which maintains a local structure such that diffusion calculations are possible, might lead to analytic or conceptual advances for the much more complicated case of diffusion on a static disordered network that exhibits the same macroscopic properties as our dynamic ordered network. To answer this, we compare certain properties which characterize the dynamic domain network to those of a Small World Network, and then analyze the diffusion coefficients for three possible domain mutations. We close with a comparison and confirmation of previous epidemiological work carried out on networks.     

Hierarchical Characterization of Complex Networks

While the majority of approaches to the characterization of complex networks has relied on measurements considering only the immediate neighborhood of each network node, valuable information about the network topological properties can be obtained by considering further neighborhoods. The current work considers the concept of virtual hierarchies established around each node and the respectively defined hierarchical node degree and clustering coefficient (introduced in cond-mat/0408076), complemented by new hierarchical measurements, in order to obtain a powerful set of topological features of complex networks. The interpretation of such measurements is discussed, including an analytical study of the hierarchical node degree for random networks, and the potential of the suggested measurements for the characterization of complex networks is illustrated with respect to simulations of random, scale-free and regular network models as well as real data (airports, proteins and word associations). The enhanced characterization of the connectivity provided by the set of hierarchical measurements also allows the use of agglomerative clustering methods in order to obtain taxonomies of relationships between nodes in a network, a possibility which is also illustrated in the current article.     

Modeling worldwide highway networks

This Letter addresses the problem of modeling the highway systems of different countries by using complex networks formalism. More specifically, we compare two traditional geographical models with a modified geometrical network model where paths, rather than edges, are incorporated at each step between the origin and the destination vertices. Optimal configurations of parameters are obtained for each model and used for the comparison. The highway networks of Australia, Brazil, India, and Romania are considered and shown to be properly modeled by the modified geographical model.     

Transport between multiple users in complex networks

We study the transport properties of model networks such as scale-free and Erd?s-Rényi networks as well as a real network. We consider few possibilities for the trnasport problem. We start by studying the conductance G between two arbitrarily chosen nodes where each link has the same unit resistance. Our theoretical analysis for scale-free networks predicts a broad range of values of G, with a power-law tail distribution $\Phi_{\rm SF}(G)\sim G^{-g_G}$ , where g_G=2λ-1, and λ is the decay exponent for the scale-free network degree distribution. The power-law tail in Φ_SF(G) leads to large values of G, thereby significantly improving the transport in scale-free networks, compared to Erd?s-Rényi networks where the tail of the conductivity distribution decays exponentially. We develop a simple physical picture of the transport to account for the results. The other model for transport is the max-flow model, where conductance is defined as the number of link-independent paths between the two nodes, and find that a similar picture holds. The effects of distance on the value of conductance are considered for both models, and some differences emerge. We then extend our study to the case of multiple sources ans sinks, where the transport is defined between two groups of nodes. We find a fundamental difference between the two forms of flow when considering the quality of the transport with respect to the number of sources, and find an optimal number of sources, or users, for the max-flow case. A qualitative (and partially quantitative) explanation is also given.     

Jamming transition in air transportation networks

In this work we present a model of an air transportation traffic system from the complex network modelling viewpoint. In the network, every node corresponds to a given airport, and two nodes are connected by means of flight routes. Each node is weighted according to its load capacity, and links are weighted according to the Euclidean distance that separates each pair of nodes. Local rules describing the behaviour of individual nodes in terms of the surrounding flow have been also modelled, and a random network topology has been chosen in a baseline approach. Numerical simulations describing the diffusion of a given number of agents (aircraft) in this network show the onset of a jamming transition that distinguishes an efficient regime with null amount of airport queues and high diffusivity (free phase) and a regime where bottlenecks suddenly take place, leading to a poor aircraft diffusion (congested phase). Fluctuations are maximal around the congestion threshold, suggesting that the transition is critical. We then proceed by exploring the robustness of our results in neutral random topologies by embedding the model in heterogeneous networks. Specifically, we make use of the European air transportation network formed by 858 airports and 11 170 flight routes connecting them, which we show to be scale-free. The jamming transition is also observed in this case. These results and methodologies may introduce relevant decision-making procedures in order to optimize the air transportation traffic.     

Robustness of Complex Networks under Attack and Repair

To study the robustness of complex networks under attack and repair, we introduce a repair model of complex networks. Based on the model, we introduce two new quantities, i.e. attack fraction fa and the maximum degree of the nodes that have never been attacked ~Ka, to study analytically the critical attack fraction and the relative size of the giant component of complex networks under attack and repair, using the method of generating function. We show analytically and numerically that the repair strategy significantly enhances the robustness of the scale-free network and the effect of robustness improvement is better for the scale-free networks with a smaller degree exponent. We discuss the application of our theory in relation to the
understanding of robustness of complex networks with reparability.