原位漫反射红外光谱中采用新的实验手段研究煤岩显微组分中的氢键

首次提出采用小瓷片反应器,结合增大载气流量的方法进行产生挥发组分固体的原位漫反射红外光谱实验,研究了两种煤的镜质组和丝质组中的氢键分布及热稳定性.两种显微组分间氢键分布的规律相似;镜质组中SH-N、羧酸二聚体和自缔合羟基等的热稳定性比丝质组中的高.但对OH-N、羟基四聚体和OH-OR₂的热稳定性随煤岩组分的变化无明显规律;随着温度的升高,OH-π含量先升高后降低,于350～380℃达最大值,其中镜质组OH-π的含量增加较快.显微组分中氢键的变化规律反映了其结构上的差异.     

HXeBr与苯和苯的衍生物弱相互作用的理论研究

采用MP2/aug-cc-pVDZ (对于Xe和I原子采用aug-cc-pVDZ-PP基组)优化了复合物HXeBr…C₆H₅X (X=H, CH₃, NH₂, N(CH₃)₂, NHCH₃, OH, OCH₃, CN, F, Cl, Br, I, COOH, SO₃H, CF₃)及单体的几何构型, 详细分析了π…H键和双齿氢键两种弱相互作用类型的特征, 以及不同的取代基对这两种弱相互作用能的影响. 对14个双齿氢键型复合物, 我们发现复合物的相互作用能与苯环衍生物(C₆H₅X)的偶极矩, 复合物中Xe-Br键键长的变化, H-Xe键键长的变化和H-Xe键振动频率的变化, 以及双齿氢键上Br原子和两个H原子范德华表面相互穿透距离之和均有较好的线性关系. 另外, 我们还发现复合物的相互作用能与双齿氢键上两个键临界点的电子密度之和, 电子密度Laplacian值之和, 静电势之和, 以及双齿氢键和苯环碳原子形成环的环临界点处的电子密度, 电子密度Laplacian值以及静电势均有着较好的线性关系.     

应用红外光谱研究脱灰对伊敏褐煤结构的影响

对伊敏褐煤的原煤和脱灰煤进行了红外光谱分析,并通过分段分峰拟合分析了脱灰前后伊敏煤结构的变化。结果表明,脱灰处理对煤中有机结构会产生一定影响。对脂氢和羟基氢键有机结构影响较小,脱灰后,脂氢结构中CH₂不对称伸缩振动没有变化,CH伸缩振动明显减少,而CH₂对称伸缩振动和CH₃不对称伸缩振动略有增加;羟基氢键结构中羟基N羟基、自缔合羟基氢键以及羟基π氢键的强度有所降低,而环氢键和羟基醚氢键的吸收强度有所增加;对芳香结构和含氧官能团的影响较大,芳香结构由原煤中的苯环三取代占主导地位转变为脱灰煤中的苯环三和四取代;含氧官能团中烷基醚和脂肪羧酸脱灰后吸收峰的强度明显减弱,这是由于水解反应导致的,而酚羟基和羧酸脱灰后吸收强度明显增强。     

苯酚-酰胺系列氢键复合物从头计算研究

运用G94W量子化学程序包,在HF/6-31G基组水平上对酰胺(DMF,DMA,HCONH2,HCONHCH3andCH3CONH2)与苯酚形成的系列氢键复合物(看作超分子)进行从头计算研究。根据计算结果探讨复合物的稳定性、施体和受体间的电荷转移及几何参数变化等规律。结果表明苯酚与上述一系列酰胺都可形成稳定的氢键复合物,其稳定性次序为CH3CONH2～HCONHCH3＞HCONH2＞DMA＞DMF。结果还表明形成氢键复合物的过程包含着电荷转移,电荷由供体酰胺转移到受体苯酚中,酰胺中C=O键长和苯酚中的O-H键长都明显有规律性地变长。计算结果与实验规律相符。     

氨基酸侧链与氧化鸟嘌呤碱基对体系的氢键作用

应用量子化学方法,分别在气相和水溶液中对氨基酸侧链与氧化鸟嘌呤碱基对(8-oxo-G∶C)形成的三体复合物的氢键键能、几何结构、电荷分布及二阶稳定化能进行了研究.结果表明,水溶液的存在削弱了复合物中的氢键强度,电荷分布变化明显,水溶液中形成氢键位点的电荷变化量约为气相中的10倍,而几何结构变化不明显、对于酶与DNA之间的相互作用的研究需在水溶液中进行.水溶液对带电三体复合物中8-oxo-G∶C与氨基酸侧链间的氢键有较大影响,键能平均减小了69.23 k J/mol,不带电复合物仅减小了3.60k J/mol.水溶液中三体复合物中8-oxo-G∶C间的氢键受侧链的影响不大,且与侧链带电与否无关,带电复合物和不带电复合物的氢键强度分别减小了24.57和30.05 k J/mol,且二阶稳定化能越大,其对应的氢键键长越短.     

受限于单壁碳纳米管中水分子结构、能量以及振动频率的密度泛函研究

利用密度泛函理论中的杂化泛函M06-2X研究了受限于不同管径单壁碳纳米管（SWCNT）内水分子团簇 （H₂O）_n=3～6的结构、能量以及振动频率. 结果显示由于SWCNT的限域效应,水分子团簇的几何构型与在真空相比发生了巨大变化,如受限（H₂O）₆能形成单链锯齿型水分子构型. 随着管直径的增大,纳米管与水之间的相互作用逐渐减弱,但水分子之间的氢键相互作用能变化不大. 对比受限和真空下水分子O-H振动频率发现,绝大部分O-H的振动频率由于碳纳米管与水的相互作用而发生了红移. AIM理论分析显示O-H振动频率的红移应归因于其电子密度的减小. 这也表明碳纳米管绝非简单的几何限制效应,而是与水分子之间存在弱电子相互作用,主要包括H…π氢键作用和O…π轨道作用,从而导致水分子的小部分电荷转移到了SWCNT上.     

I2-1-己烯复合物电子转移振动重组能的共振拉曼强度分析

获得了I₂-1-己烯复合物的吸收横截面和绝对共振拉曼横截面.用约270 nm光激发导致复合物的I-I伸缩振动模和C-C伸缩振动模等拉曼基频、泛频及其组合频强度的共振增强.采用含时波包理论的简单模型定量确定I₂-1-己烯复合物的光致电子转移振动重组能和均质展宽.总振动重组能3 744 cm^-1分布于4个振动模,贡献最大是I-I伸缩振动v₁₃,其值为2 490 cm^-1,约占总振动重组能的2/3.其次为C-C伸缩振动v₄₆,其值为1 170 cm^-1,约为总振动重组能的1/3.剩余2%的振动重组能是由烷基CH₃和CH₂的扭转振动v₃₆和v₂₄贡献.     

4-羟甲基吡啶－水红移氢键的密度泛函理论研究

使用密度泛函理论B3LYP方法和6-311++G**基函数对4-羟甲基吡啶与水形成的1:1和1:2（摩尔比）氢键复合物进行了理论计算研究,分别得到稳定的4-羟甲基吡啶－H₂O和4-羟甲基吡啶－(H₂O)₂氢键复合物3个和8个。经基组重叠误差和零点振动能校正后,最稳定的1:1和1:2氢键复合物的相互作用能分别为-20.536和-44.246 kJ/mol。振动分析显示O-H···N(O)氢键的形成使复合物中O-H键对称伸缩振动频率红移(减小)。自然键轨道分析表明,4-羟甲基吡啶与水形成最稳定的1:1和1:2氢键复合物时,分子间电荷转移分别为0.02642 e 和0.03813 e 。含时密度泛函理论TD-B3LYP/ 6-311++G**计算显示,相对于4-羟甲基吡啶单体分子,氢键H-OH···N和H-OH···OH的形成分别使最大吸收光谱波长兰移8~16纳米和红移4~11纳米。     

肾上腺素与胞嘧啶相互作用的密度泛函理论研究

采用密度泛函理论（DFT）B3LYP方法和6-311＋G（d,p）基组对肾上腺素-胞嘧啶复合物进行结构优化和频率计算,得到15种稳定的复合物.研究发现,所有的复合物进行基组重叠误差（BSSE）校正后的相互作用能为-11.43^-48.96kJ/mol,符合氢键能量范围,相互作用能主要由氢键所贡献.结构和振动频率分析显示,氢键的形成使相应O（N）—H键的键长变长,对称伸缩振动频率减小,说明复合物中形成的氢键都是正常的红移型氢键.应用自然键轨道（NBO）理论和分子中的原子（AIM）理论对15种复合物的氢键性质和特征进行分析,发现氢键对于复合物的稳定性起着重要作用,当复合物形成2个或更多的氢键时,氢键的数目、类型及强度共同决定着复合物的稳定性,复合物基本符合三氢键〉二氢键〉单氢键的稳定顺序,三氢键复合物4是最稳定的,复合物3存在单氢键O—H…O,比部分二氢键复合物要稳定.     

CH3SH和CH3SLi分子间的锂键和氢键共存型相互作用

在CH₃SLi＋CH₃SH势能面上求得锂键和氢键共存型复合物的两种稳定构型. 频率分析表明, 与单体相比复合物中S(5)—Li(6)键伸缩振动频率发生红移, 而C(8)—H(10)键伸缩振动频率发生蓝移. 经B3LYP/6-311＋＋G**, MP2/6-311＋＋G**及MP2/AUG-CC-PVDZ水平计算的含基组重叠误差(BSSE)校正的复合物?中相互作用能分别为－58.99, －57.87和－62.89 kJ•mol^－1. 采用自然键轨道(NBO)理论, 分析了复合物中单体轨道间的电荷转移, 电子密度重排及其与相关键键长变化的本质等. 采用分子中的原子(AIM)理论分析了复合物中氢键和锂键的电子密度拓扑性质．在极化连续模型(PCM)下, 考察了溶剂化效应. 结果表明, 所考察的水、二甲亚砜、乙醇和乙醚等四种溶剂均使单体间的相互作用能增大, 且溶剂对复合物中的锂键结构及其振动频率具有显著的影响, 而对复合物中的氢键的振动频率影响不大.     

原位漫反射新方法研究煤中氢键的分解动力学

采用一种新的原位漫反射红外技术研究了干燥脱灰褐煤中氢键的分解动力学,同时介绍并应用了一种防止高温下挥发分冷凝的原位漫反射红外实验方法。基于两条假设,当煤加热至560℃时,单一反应模型可以用于除OH－π键以外氢键分解动力学参数的求解。结果表明,煤中羧酸二聚体、OH－N 和SH－N三种氢键的分解动力学遵循二级反应;OH－OR₂,紧密结合的羟基四聚体和自缔合的羟基多聚体则遵循一级反应。计算所得的几种氢键分解活化能与文献中采用其他 方法所得结果基本一致。在所考察的六种氢键中,羧酸二聚体、OH－N 、SH－N和紧密结合的羟基四聚体的分解可以分为两个阶段（230℃~380℃和 380℃~500℃）,而OH－OR₂和自缔合的羟基多聚体的分解可以按照一段来处理。另外,通过比较自缔合的羟基多聚体的分解活化能和文献中的氢键键能,获得了其分解机理。
     

Solvent effect on stretching vibration frequencies of the N-H and O-H groups of diphenylamine and phenol in complexes with various proton acceptors: Cooperative effect

Solvent effect on the stretching vibration frequencies of the O-H and N-H groups in complexes of phenol and diphenylamine with bases in aprotic and proton-donor solvents was studied by IR spectroscopy. Linear correlations of high quality were obtained between the frequencies of hydrogen-bonded O-H and N-H groups in these complexes in aprotic solvents and a new solvent parameter, S _VW. The cooperative effect of a proton-donor solvent on the strength of hydrogen bonds in complexes of phenol and diphenylamine with bases was evaluated. It was demonstrated for the first time that the cooperative effect in the examined systems can lead to both strengthening and weakening of hydrogen bonds.     

The ν(OH/OD) band shape of strong hydrogen bonded dimers of phosphinic acids. Phenomenology and formation models

The infrared spectra of phosphinic acid R₂POOH dimers (R=CH₃, CH₂Cl, C₆H₅) have been studied in CCl₄ and CH₂Cl₂ solutions (T=300 K). The infrared spectra of deuterated R₂POOD dimers (R=CH₃, CH₂Cl) were also studied in the gas phase (T=400–550 K) and solid state (T=100–300 K). They are compared with previously studied spectra of the light (non-deuterated) dimers in the gas phase, in the solid state and in low-temperature argon matrices (T=12–30 K) in the 4000–400 cm⁻¹ spectral region. It is found that the strong and broad ν(OH) dimer bands have similar shapes, nearly equal values of bandwidth and low-frequency shift, and possess the Hadzi ABC structure irrespective of the type of acid, significant differences of dimerization enthalpies, influence of solvent, the type of H-bonded complexes (cyclic dimers in the gas phase, in solutions, and in inert matrices, and infinite chains in the solid state), and temperature in the range 12–600 K. Isotopic ratio of the first moments of light and deuterated acid bands has been measured. Analysis of the ν(OH/OD) band of hydrogen bonded dimers of phosphinic acids shows that the interaction between the two intermolecular bonds O–HOP in a cyclic complex plays virtually no role in the mechanism of the ν(OH/OD) band formation; the shape of ν(OH/OD) band is controlled mainly by the POOH(D)O fragment; and the band shape of strong hydrogen bonded complexes is formed by a number of vibrational transitions from the ground state to different combination levels in the region 3500–1500 cm⁻¹.     

Cation-anion hydrogen bonds: a new class of hydrogen bonds that extends their strength beyond the covalent limit. A theoretical characterization

The existence of O-H···O hydrogen bonds having a strength within the -80 to -210 kcal/mol range, that is, in the range of strength of covalent bonds and well beyond the so-called covalent limit (-50 kcal/mol), is reported on complexes where the O-H proton donor and O acceptor groups are located in ions of opposite sign. A complete analysis of short distance O-H···O hydrogen bonds between charged fragments was performed for cases where the OH and O groups are both located on charged molecules. It shows that these interactions (a) are nonsymmetrical for the O-H and H···O distances, (b) have a noncovalent H···O bond critical point, and (c) have a strong and energetically stable electrostatic component when the OH and O groups are located in oppositely charged molecules. These cation-anion O-H···O interactions are energetically stable, satisfy the usual topology for hydrogen bonds, HBs, and also have the same directionality found in other HBs. Therefore, they should be considered as a new class of HBs, the cation-anion hydrogen bonds.     

Studies on the Halogen Substituted β-Amino Acids and Their Cu(Ⅱ) Coordination Complexes in Crystallography

Halogen substituted β-amino acids, D,L-3-amino-3-(4-fluoro)phenylpropionic acid(D,L-HL1, 1) and D,L-3-amino-3-(4-bromo)phenylpropionic acid(D,L-HL2, 2), as well as their Cu(Ⅱ) coordination complexes[Cu(L1)₂(CH₃OH)₂]·2CH₃OH(3) and[Cu(L2)₂(CH₃OH)₂]·2CH₃OH(4) were investigated and their single crystal structures were discussed in details. Supramolecular helical chains were found in β-amino acids 1 and 2 while there was no helix in their coordination complexes 3 and 4. The formation of supramolecular helixes could be due to the hydrogen bonds between terminal-NH³⁺ and adjacent-COO^- in β-amino acids 1 and 2. While, this kind of hydrogen bonds could not be observed in their Cu(Ⅱ) coordination complexes 3 and 4, in which central-symmetrical dimers could be formed via coplanar coordinated bonds(N-Cu-O) between-NH₂ and-COO^-.     

Structural correlations in liquid water: a new interpretation of IR spectroscopy

We present a new and alternative interpretation of the structure of the IR vibrational mode (nu(OH) band) of pure water. The re-interpretation is based on the influence of the cooperative hydrogen bonding arising from a network of hydrogen bonds in the liquid. The nu(OH) band has six components that are dominated by differences in their O-H bond lengths but deviate from thermodynamically average values due to interactions with the hydrogen bond network. The physical origin of the structure in the nu(OH) band is directly related to the O-H bond length, and variations in this bond length are caused by the influence of the surrounding hydrogen-bonded network of water molecules.     

Hydrogen Bonding Assembled 3D Supramolecular Structures Formed by 5-Amino-2,4,6-triiodoisophthalic Acid and N-Heterocyclic Aromatic Ligands

Three salts constructed by 5-amino-2,4,6-triiodoisophthalic acid(ATIPA) with N-heterocycles aromatic coformers such as pyridine tetrazolium, tetramethylpyraziiie and cyanuric acid were synthesized by slowing evaporation of solvent. X-Ray single crystal analysis shows that hydrogen protons of the carboxyl groups transfer to nitrogen atoms of the N-heterocyclic coformers to form N-H…0 hydrogen bonds in all the three compounds. A huge amount of H-bonds play significant role in tlie construction of these compounds and all of them generate 3D structures through strong O-H…N, O-H…O, N-H…O and weak C-H…O hydrogen bonds. Moreover, solvent water molecules are indispensable in the formation of compounds 1 and 3, which constitutes different supramolecular synthons to bridge individual molecules and chains to form stable structures. In addition, these crystal structures were further characterized by themiogravimetric analysis and infrared spectroscopy.     

Infrared-optical double resonance spectroscopic investigation of trifluoromethylphenols and their water complexes

The hydrogen bonding behavior of trifluoromethylphenols and their water complexes were investigated using IR-UV double resonance spectroscopy. Both ortho- and meta-trifluoromethylphenols exist in the syn conformer, which is the global minimum in both the cases. The IR spectrum in the O-H stretching region reveals the absence of an intramolecular O-H···F hydrogen bond in the syn-o-trifluoromethylphenol, which is in contrast to the results reported in the literature. The water complexes of both o-trifluoromethylphenol and m-trifluoromethylphenol are characterized by formation of O-H···O hydrogen bonds between the donor phenolic OH group and the acceptor water molecule. In addition, the o-trifluoromethylphenol-(water)(2) complex was also observed.