Nanoscale proteomics

Efforts to develop a liquid chromatography (LC)/mass spectrometry (MS) technology for ultra-sensitive proteomics studies (i.e., nanoscale proteomics) are described. The approach combines high-efficiency nanoscale LC (separation peak capacity of 10³; 15-m-i.d. packed capillaries with flow rates of 20 nL min^–1, the optimal separation linear velocity) with advanced MS, including high-sensitivity and high-resolution Fourier transform ion cyclotron resonance MS, to perform both single-stage MS and tandem MS (MS/MS) proteomic analyses. The technology enables broad protein identification from nanogram-size proteomics samples and allows the characterization of more abundant proteins from sub-picogram-size samples. Protein identification in such studies using MS is demonstrated from <75 zeptomole of a protein. The average proteome measurement throughput is ~50 proteins h^–1 using MS/MS during separations, presently requiring approximately 3 h sample^–1. Greater throughput (~300 proteins h^–1) and improved detection limits providing more comprehensive proteome coverage can be obtained by using the accurate mass and time tag approach developed in our laboratory. This approach provides a dynamic range of at least 10⁶ for protein relative abundances and an improved basis for quantitation. These capabilities lay the foundation for studies from single or limited numbers of cells.     

采用自动前处理LC/MS进行血浆中药物的快速分析

药物研究的发展对高通量的样品处理分析提出了越来越高的要求,减少样品制备时间和分析时间是解决问题的关键。我们新近发展了一种具有在线稀释旁路和新的样品预处理柱的Shim-Pack MAYI-ODS自动柱切换HPLC和LC／MS系统,该系统无需样品前处理,可直接进样进行血浆、血清中的药物分析。本文利用自动样品前处理LC／MS系统,用ODS整体柱实现了血浆中药物的快速分析。包括样品预处理,整个分析仅需1．2min完成。     

Development of an online capillary comprehensive 2D-LC system for the analysis of proteome samples

In the present contribution, a fully automated capillary comprehensive two-dimensional LC (LC×LC) method, for proteomic analysis, was developed for the first time. The investigated platform was characterized by the coupling of high-pH RP with low-pH RP separations thus ensuring the generation of high peak capacity despite the employment of identical stationary phases. The use of capillary columns in both dimensions allowed to reduce mobile-phase consumption and enhance sensitivity. Fraction transfer from the first to the second dimension was performed by means of two 2-position 6-port nano-switching valves, under stop-flow conditions. Values as high as 1208 and 955 were obtained for the theoretical and practical peak capacity, respectively. The investigated LC×LC system showed good retention time repeatibility with RSD values ranging from 0.8 to 6.0% for the first dimension and from 1.0 to 3.0% for the second dimension, respectively. RSD peak area values below 9.5% were also attained, thus demonstrating the precision of the LC×LC method employed.     

Self-constructed stable liquid crystal alignment in a monomer-liquid crystal mixture system

Here, we demonstrate excellent liquid crystal (LC) vertical alignment without using an alignment layer printing process by introducing octadecyltrichlorosilane (OTS) into the LC mixture. Further, we investigated the alignment mechanism by analysing the surfaces of the substrates. The optimum concentration of OTS was found to be about 0.03 wt%, which is 1/100 of that in the previously reported polyhedral oligomeric silsesquioxane (POSS)–LC system. Moreover, the OTS–LC system exhibited a more stable LC alignment compared with the POSS–LC system. These differences may arise from the different strengths of surface–dopant interactions; that is, the covalent bond in the OTS–LC system and the van der Waals interactions in the POSS–LC system. We also demonstrated that the method can be used in a capillary tube, which may serve as a new method facilitating the application of LCs with curved surfaces.     

Micellar liquid chromatography for lipophilicity determination of new biologically active 1,3‐purinodiones

A series of newly synthesized 1,3‐purinodiones with potential anticonvulsant activity, exhibiting affinity to adenosine A₁ and/or A_2A receptors, were subjected to micellar LC (MLC) with SDS as micelle‐forming agent and n‐propanol as organic modifier. Two C18 silica‐based columns were employed in MLC: a particle one and a monolithic. In parallel, those derivatives were also analyzed in RP‐LC on four silica‐based columns and on an immobilized artificial membrane column. The correlations between the relevant logarithms of the retention factors of analytes obtained in MLC, immobilized artificial membrane and RP‐LC systems on the one hand, and the calculated log P (clog P) and log D values (clog D) on the other, were examined. The level of the correlations of retention data from MLC and RP‐LC systems with clog P and clog D obtained is similar but it could be stressed that MLC allows increasing the speed of analysis and using only one mobile phase. Moreover, there is no need of applying an extrapolation procedure in lipophilicity determination. Therefore, the MLC systems, providing chromatographic data in a fast and efficient manner, were demonstrated as promising alternatives to the classical RP‐LC systems to estimate the lipophilicity of drugs and drug candidates.     

Suitability of automated capillary and micro liquid chromatography for routine determination of drugs in human plasma samples from clinical pharmacokinetic investigations

One of the most widely acclaimed features of capillary and microcolumn LC, in comparison with conventional HPLC, is the enormous increase in mass sensitivity. Nevertheless, application of capillary and micro LC in quantitative trace bioanalysis, characterized by weak analyte concentrations in complex matrices, can only be of any practical utility if large sample volumes can be injected onto the columns without affecting chromatographic resolution and efficiency. Two applications of large volume injection in a non-eluting solvent (on-column focusing) for the quantitative analysis of drugs in biological fluids on both capillary and micro chromatographic systems are presented: the first example deals with a new selective H₁-antihistaminic drug, mizolastine, the second one with a well known calcium antagonist, diltiazem, and its main metabolites. For both compounds, results obtained on micro and capillary LC in comparison with conventional HPLC are reported. The results demonstrate that when conventional HPLC methods are transformed into either micro or capillary LC techniques, they gain in sensitivity. By means of an on-column focusing technique, it is possible to increase the sensitivity 3–5 fold in comparison to conventional HPLC methods, but not 50–60 fold as obtained on synthetic drug solutions. Column robustness, handiness, reproducibility, and suitability of micro systems for routine bioanalysis are discussed for both capillary and micro LC columns, as well as limits of the technique in trace organic analysis problems.     

Polymeric liquid crystals: structural basis for ferroelectric and nonlinear optical properties

This paper describes the rational design and structure–property relations in three different types of polar LC polymers with interesting material properties, as follows. (i) Chiral LC polymers, which are functionalized with crosslinkable groups, can be converted into LC elastomers with chiral smectic C^* phases. The mechanical orientability of these elastomers leads to new piezoelectric materials. (ii) The curing (dense crosslinking) of a polymer matrix provides one possibility of stabilizing the polar order of dye molecules, which is necessary for frequency doubling. Additionally, LC phases can help to stabilize this polar structure, which leads to large and stable nonlinear optical coefficients. (iii) Polymer analogous esterifications offer a convenient method for the synthesis of chiral smectic C^* polymers with large ferrolectric polarizations.     

High temperature liquid chromatography and liquid chromatography-mass spectroscopy analysis of octylphenol ethoxylates on different stationary phases

Temperature was investigated as active parameter in the liquid chromatography (LC) analysis of octylphenol ethoxylates. Significant differences in selectivity were observed when the oligomers were analyzed by reversed phase LC (RPLC) on silica-, zirconia- and polystyrene/divinylbenzene based stationary phases at low (ambient), medium and elevated temperature with acetonitrile/water as mobile phase. As ascertained by LC-mass spectroscopy (MS), in most cases the elution order of the oligomers was completely reversed comparing ambient and high temperature separations. On a graphitized carbon type column, the selectivity remained unchanged, regardless the analysis temperature. Also in normal phase LC, the elution order remained unaffected by temperature variations both for acetonitrile/water and methanol/water mixtures as mobile phase. Surprisingly, when reversed phase LC on a octadecylsilicagel column at different temperatures was repeated with methanol instead of acetonitrile as mobile phase ingredient, the reversal of elution order did not take place. Results are evaluated in terms of thermodynamic parameters.     

Liquid crystalline side-group block copolymers with triblock structure: Investigations on the influence of the block arrangement on the morphology and the LC-phase behavior

Liquid crystalline triblock copolymers with LC inner block and amorphous outer blocks have been synthesized by “living” anionic polymerization and investigated using DSC, TEM, and small-angle x-ray diffraction. All samples of poly[styrene-block-2-(3-cholesteryloxycarbonyloxy) ethyl methacrylate-block-styrene] (PS-b-PChEMA-b-PS) show liquid crystalline behavior and phase separation between the blocks. Compared to triblock copolymers with PS inner block (PChEMA-b-PS-b-PChEMA) and diblock copolymers (PS-b-PChEMA) the LC block copolymers with PS outer blocks have the same properties. The LC behavior and the morphology do not depend on the block arrangement; they are only influenced by the volume fractions of the blocks. Those samples in which the liquid crystalline subphase is not continuous (spheres) only a nematic phase was found, whereas in all samples with a continuous liquid crystalline subphase, the smectic A phase of the homopolymer was observed. © 1996 John Wiley & Sons, Inc.     

On-line identification of sugarcane (Saccharum officinarum L.) methoxyflavones by liquid chromatography-UV detection using post-column derivatization and liquid chromatography-mass spectrometry

Sugarcane (Saccharum officinarum L., Gramineae) bagasse and leaves were investigated for their flavonoid content and transgenic sugarcane ("Bowman-Birk" and "Kunitz") was compared with non-modified ("control") plants. Analyses were carried out by high-performance liquid chromatography coupled to diode array UV detection (LC/UV), also using post-column addition of shift reagents, and tandem MS (atmospheric pressure chemical ionization-MS/MS and collision-induced dissociation-MS). On-line UV and MS data demonstrated the presence of methoxyflavone glycosides and aglycones in a total of seven compounds. Three naturally occurring flavones glycosides and two unusual erythro- and threo-diastereoisomeric flavolignan 7-O-glucosides were identified together with their aglycones.     

Development and validation of an on-line two-dimensional reversed-phase liquid chromatography-tandem mass spectrometry method for the simultaneous determination of prostaglandins E(2) and F(2alpha) and 13,14-dihydro-15-keto prostaglandin F(2alpha) levels in human plasma

We developed and validated an on-line reverse-phase two-dimensional LC/MS/MS (2D-LC/MS/MS) system for simultaneous determination of the levels of prostaglandin (PG) E(2) as well as PGF(2alpha) and its metabolite 13,14-dihydro-15-keto PGF(2alpha) (F(2alpha)-M) in human plasma. Analytes were extracted by a three-step solid-phase extraction. Samples were then analyzed by on-line 2D-LC/MS/MS with electrospray ionization in negative mode. The 2D-LC system is composed of two reverse-phase analytical columns with a trapping column linking the two analytical columns. While an acidic buffer was used for both separation dimensions, differing organic solvents were employed for each dimension: methanol for the first and acetonitrile for the second to increase resolving power. The 2D-LC/MS/MS method was highly selective and sensitive with a significantly lower limit of quantitation (0.5 pg/mL for PGE(2) and 2.5 pg/mL for PGF(2alpha) and F(2alpha)-M, respectively). Linearity of the 2D-LC/MS/MS system was demonstrated for the calibration ranges of 0.5-50 pg/mL for PGE(2) and 2.5-500 pg/mL for PGF(2alpha) and F(2alpha)-M, respectively. Acceptable precision and accuracy were obtained throughout the calibration curve ranges. This highly selective and sensitive method was successfully utilized to determine the endogenous levels of PGE(2), PGF(2alpha), and F(2alpha)-M in plasma samples from six (four male and two female) normal volunteers. The mean concentrations for each analyte were 0.755 pg/mL for PGE(2), 5.70 pg/mL for PGF(2alpha) and 9.48 pg/mL for F(2alpha)-M.     

On the stability of micro-LC columns (packed fused silica capillary columns)

The life expectancy and resistance to flow, pressure shocks, solvent gradients, and bending of packed fused silica capillary columns (Micro-LC) are discussed.     

Electroluminescent segmented liquid crystalline trimers

The synthesis and liquid crystal behaviour of light‐emitting trimeric liquid crystals consisting of three mesomorphic moieties connected by aliphatic spacers are reported. The combination of an aromatic light‐emitting central core and two cholestanyl (dihydrocholesteryl) groups induces a helical liquid crystalline phase with circularly polarised photoluminescence and electroluminescence. These segmented trimers are designed to possess a high glass transition temperature below which the structure of liquid crystalline phases can be fixed. The effects of odd and even spacers, spacer length and the presence of large lateral substituents on the liquid crystal behaviour and the glass transition temperature of these trimers were studied. Electroluminescence from a segmented liquid crystalline trimer is reported for the first time.     

Coupled-column liquid chromatography method with photochemically induced derivatization for the direct determination of benzoylureas in vegetables

The coupled-column (LC-LC) system, consisting of a first column packed with internal surface reversed phase (ISRP) (50 x 4.6mm ID) and a Chrompack C18 (100 x 4.6 mm ID) as second column, allowed the simultaneous determination of five benzoylurea insecticides in dichloromethane (CH2Cl2) extracts of vegetable samples without any clean-up step. This system was combined with a photochemically induced fluorescence (PIF) post-column derivatization in order to provide strongly fluorescent photoproducts from the non-fluorescent benzoylureas. Limits of detection ranged from 0.21 to 0.98 microg L(-1) of pesticide (equivalent to 0.14-0.65 microg kg(-1) in vegetable samples) and limits of determination ranged from 4.0 to 10.0 microg L(-1) (equivalent to 2.7-6.7 microg kg(-1)). Linearity of the method was established between 2 and 1800 microg L(-1), depending upon the compound. Validation of the total method was performed by randomly analyzing recoveries of four vegetable samples (aubergine, cucumber, green bean, and tomato) spiked at two levels of concentration (10.0 and 33.3 microg kg(-1)). The combination of the LC-LC system with PIF detection provides a sensitive, selective, and rapid method for the determination of pesticides in vegetable samples at levels lower than the maximum residue levels (MRLs) established for these compounds by Spanish legislation.     

Coupled-column liquid chromatography combined with postcolumn photochemical derivatization and fluorescence detection for the determination of herbicides in groundwater

This study examines the application of coupled-column LC-photochemically induced fluorimetry-fluorescence detection (LC-LC-PIF-FD), demonstrating its potential for the quantitative and selective detection of six herbicides, including propanil and the phenylureas monuron, monolinuron, chlorotoluron, diuron and neburon in groundwater samples. An AQUASIL C18 50 x 4.6 mm(2) id column coupled to an AQUASIL C18 150 x 4.6 mm(2) id column for analyte clean-up and determination were used, respectively. A simple SPE with Cl8 cartridges was carried out, yielding average recoveries between 80 and 112% (n = 6) with RSDs between 0.5 and 9%. The LODs ranged from 0.0083 to 0.0833 microg/L in the groundwater samples.     

Ultralow flow liquid chromatography and related approaches: A focus on recent bioanalytical applications

Ultralow flow LC employs ultra-narrow bore columns and mid-range pL/min to low nL/min flow rates (i.e., ≤20 nL/min). The separation columns that are used under these conditions are typically 2–30 μm in inner diameter. Ultralow flow LC systems allow for exceptionally high sensitivity and frequently high resolution. There has been an increasing interest in the analysis of scarce biological samples, for example, circulating tumor cells, extracellular vesicles, organelles, and single cells, and ultralow flow LC was efficiently applied to such samples. Hence, advances towards dedicated ultralow flow LC instrumentation, technical approaches, and higher throughput (e.g., tens-to-hundreds of single cells analyzed per day) were recently made. Here, we review the types of ultralow flow LC technology, followed by a discussion of selected representative ultralow flow LC applications, focusing on the progress made in bioanalysis of amount-limited samples during the last 10 years. We also discuss several recently reported high-sensitivity applications utilizing flow rates up to 100 nL/min, which are below commonly used nanoLC flow rates. Finally, we discuss the path forward for future developments of ultralow flow LC.     

LC‐MS of streptomycin following desalting of a nonvolatile mobile phase and pH gradient

Streptomycin (SM) is composed of streptidine, streptose and N‐methyl glucosamine sugar moieties. For the determination of SM and its related substances, an ion‐pair LC‐UV detection method using a Supelcosil LC‐ABZ column was developed previously. While analyzing commercial samples, several unknown compounds were detected. Most of these compounds are not yet characterized. In this study, the above LC method was coupled to MS for impurity profiling in a selected commercial sample. However, it could not be directly coupled to MS due to the presence of the nonvolatile salt, buffer and ion‐pair reagent in the mobile phase. So, for structural characterization, each peak eluted from the nonvolatile eluent system was collected and transferred to MS after the desalting process. In total, 16 compounds were studied, 15 compounds including 12 unknowns could be identified.     

Characterization of bixin by LC-MS and LC-NMR

An overview upon modern analytical techniques for the isolation, separation, and structural identification of the essential bioactive carotenoid bixin is given. Isolation from biological matrices is performed by matrix solid phase dispersion (MSPD). The extract is separated with shape-selective C(30 )columns. Structural assignment of the separated compounds is done by online LC-MS and capillary HPLC-NMR.     

Surfactant-sensitized post-column reaction with xylenol orange for the determination of lanthanides by ion chromatography

The presence of the cationic surfactants cetylpyridinium chloride and hexadecyltrimethylammonium bromide in an alkaline 40% methanol medium was found to enhance sensitivity when xylenol orange is employed as the post-column reaction reagent for the determination of lanthanides by dynamic ion chromatography. Detection of individual lanthanides was carried out at 618 nm after separation by cation-exchange chromatography with gradient elution on a C₁₈ column. The eluent was -hydroxyisobutyric acid-sodium octanesulfonate, pH 3.8. Sensitivity enhancements by factors of three to six, compared with xylenol orange alone, were achieved at a cationic surfactant concentration of 2.4 mM. The calibration response was linear in the 0.05 to 5 μg ml⁻¹ analyte concentration range. Limits of detection below 3 ng were obtained for all the natural lanthanides and lanthanum. No sensitivity enhancement effects were observed with anionic (sodium dodecyl sulfate) and non-ionic (Triton X-100) surfactants under the conditions tested.     

Preparation,purification, and analysis of alkylated cyclodextrins

Methods of alkylation of α-, β- and γ-cyclodextrins have been optimized with regard to the parameters of reaction, degree of alkylation and yields. The analysis of the reaction mixtures and of the isolated single species has been performed by high temperature GC and HPLC. The phase systems of the preferably applied HPLC have been carefully adjusted by variation of both the stationary and mobile phases to the very different hydrophobicities of the various alkylated CD species which have been synthesized. Several partially or fully alkylated CD species were isolated from preparative scale HPLC separations in high purity.