Hydrogen-bonded capsules in polar,protic solvents

A kinetically stable, dimeric capsule is formed by tetrahydroxyresorcinarene in methanol; it encapsulates tropylium and tetramethylammonium cations.     

Guest encapsulation and self-assembly of molecular capsules in polar solvents via multiple ionic interactions

Herein we report the formation and characterization of a novel type of capsules resulting from the self-association between oppositely charged complementary building blocks in MeOH/H2O. The assembly is based on the interaction between tetraamidinium calix[4]arenes 1a-d and tetrasulfonato calix[4]arene 2. Evidence for the formation of the expected 1:1 assemblies is provided by proton NMR, ESI-MS, and ITC. The association process is fast on the NMR time scale and strongly entropy driven, with association constants in the range of 10(6) M-1. The system 1a.2 shows binding affinity toward acetylcholine, tetramethylammonium, and N-methylquinuclidinium cations.     

Self-organization of spheroidal molecular assemblies in polar solvents

[reaction: see text] We report a number of 1:1 noncovalent complexes composed of a symmetrical trisphosphonate and various symmetrical trisammonium or trisamidinium compounds. The spheroidal complexes show high thermodynamic stability, with association constants Ka reaching 10(6) M(-1) in methanol and in some cases even exceeding 10(3) M(-1) in water. The observed Ka values correlate well with the different degree of preorganization of the complexation partners.     

Hydrogen-bonded molecular capsules are stable in polar media

Robust, very large hydrogen-bonded capsules which are even stable in 50:50 water-acetone mixtures have been characterized both in solution and in the solid state.     

Narcissistic self-sorting of hydrogen-bonded dimeric capsules formed through self-assembly of flexible tripodal receptors in polar solvents

Purely hydrogen-bonded dimeric capsule formation through self-sorting of three different tripodal receptors, having similar size and bearing the same functionality, through dynamic self-assembly in polar solvents is reported.     

Dispersion polymerization in polar solvents

The effect of the nitrogen purge, monomer purification, type of agitation, and presence of costabilizer on the particle size distribution (PSD) was investigated in the dispersion po-lymerization of styrene in ethanol and in the dispersion copolymerization of styrene and butyl acrylate in a water–ethanol mixture. Purging with nitrogen and, to a lesser extent, monomer purification, were of paramount importance to achieve monodispersity. The type of agitation had a week effect on the PSD, whereas the presence of costabilizer had no effect on the PSD. © 1995 John Wiley & Sons, Inc.     

Capsule-like assemblies in polar solvents

Calix[4]arene derivatives with four anionic groups at their upper rim form discrete 1:1 complexes with complementary calix[4]arene derivatives bearing four cationic groups at their upper rim. Each cation is bound by two anions, and vice versa, in a mutual chelate arrangement, reinforced by a network of ionic hydrogen bonds. These multiple electrostatic interactions lead to the formation of highly stable capsule-like assemblies even in polar protic solvents such as methanol and water. In the capsule interior a cavity is formed that is in principle large enough for the encapsulation of small aliphatic and aromatic guests (170-230 A(3)). Monte Carlo simulations in water reproducibly lead to the same regular opimized structures. These differ mainly by their inner volume and flexibility, as demonstrated by molecular dynamics calculations. Most half-spheres can be synthesized by way of the tetrakis(chloromethyl) or the tetrabromocalix[4]arene intermediate. Oppositely charged calix[6]arenes also form strong complexes, but no indication was found for a lock in the cone conformation. The formation of the ball-shaped complexes from calix[4]arene building blocks was studied with Job plots, NMR titrations, NOESY, and variable-temperature experiments, as well as ESI-MS measurements. Investigations aimed at the inclusion of various guest molecules were carried out with alcohols, sulfoxides, benzene derivatives, and ammonium, as well as pyrazinium guests. Although binding isotherms were generated with cationic guests, these must be considered to be loosely associated around the seam rather than included inside the capsule.     

Self-assembling cyclic peptides: molecular dynamics studies of dimers in polar and nonpolar solvents

The self-assembly of cyclic D,L-alpha-peptides into hollow nanotubes is a crucial mechanistic step in their application as antibacterial and drug-delivery agents. To understand this process, molecular dynamics (MD) simulations were performed on dimers of cyclic peptides formed from cyclo [(-L-Trp-D-N-MeLeu-)4-]2 and cyclo [(-L-Trp-D-Leu-)4-]2 subunits in nonpolar (nonane) and polar (water) solvent. The dimers were observed to be stable only in nonpolar solvent over the full 10 ns length of the MD trajectory. The behavior of the dimers in different solvents is rationalized in terms of the intersubunit hydrogen bonding, hydrogen bonding with the solvent, and planarity of the rings. It is shown that the phi and psi dihedral angles of a single uncapped ring in nonane lie in the beta-sheet region of the Ramachandran plot, and the ring stays in a flat conformation. Steered MD (SMD) simulations based on Jarzynski's equality were performed to obtain the potential of mean force as a function of the distance between the two rings of the capped dimer in nonane. It is also shown that a single peptide subunit prefers to reside close to the nonane/water interface rather than in bulk solvent because of the amphiphilic character of the peptide ring. The present MD results build the foundation for using MD simulations to study the mechanism of the formation of cyclic peptide nanotubes in lipid bilayers.     

Assembly of resorcinarene capsules in wet solvents

Resorcinarenes assemble in wet chloroform or benzene to form hexameric capsules, resembling inflated cubes or volleyballs. NMR methods are used to determine the number of solvent molecules detained inside; eight molecules of benzene are encapsulated.     

Self-assembly of polar functionalities using noncovalent platforms

Small peptide fragments functionalized with dimelamine units spontaneously form well-defined assemblies. The hydrogen-bond donating and accepting sites in the peptide units are perfectly compatible with the hydrogen-bond assembly motif and slightly stabilize the assembly via additional hydrogen-bond formation.     

Confinement of polar solvents within beta-cyclodextrins

Using molecular dynamics techniques, we examined equilibrium and dynamical characteristics pertaining to the solvation of a single beta-cyclodextrin (CD) in water and in dimethylsulfoxide (DMSO). Compared to its global minimum structure, the overall shape of the solute in solution is reasonably well preserved. While in aqueous solutions, the average number of solvent molecules retained within the central cavity of the oligosaccharide is close to 5, for DMSO, that number reduces to approximately 1. No evidence of significant orientational correlations of the trapped molecules were found in either solvent. The main contributions to the hydrogen-bond (HB) connectivity between the solute and the bulk phases are due to the more distal HO6-O6 hydroxyl groups, acting as HB donors and acceptors. The average residence time for retained DMSO was found to be in the nanosecond range, and it is, at least, 1 order of magnitude longer that the one observed for water. We also analyzed the characteristics of the solvation of the beta-CD in an equimolar water-DMSO mixture. In this environment, we found a preferential localization of a single DMSO molecule in the interior of the CD and a very minor retention of water. In the mixture, the characteristic time of residence of the trapped DMSO molecule increases by a factor of approximately 2. The observed difference was rationalized in terms of the fluctuations of the local concentrations of the two species in the vicinity of the CD top and bottom rims.     

Self-assembly of class II hydrophobins on polar surfaces

Hydrophobins are structural proteins produced by filamentous fungi that are amphiphilic and function through self-assembling into structures such as membranes. They have diverse roles in the growth and development of fungi, for example in adhesion to substrates, for reducing surface tension to allow aerial growth, in forming protective coatings on spores and other structures. Hydrophobin membranes at the air-water interface and on hydrophobic solids are well studied, but understanding how hydrophobins can bind to a polar surface to make it more hydrophobic has remained unresolved. Here we have studied different class II hydrophobins for their ability to bind to polar surfaces that were immersed in buffer solution. We show here that the binding under some conditions results in a significant increase of water contact angle (WCA) on some surfaces. The highest contact angles were obtained on cationic surfaces where the hydrophobin HFBI has an average WCA of 62.6° at pH 9.0, HFBII an average of 69.0° at pH 8.0, and HFBIII had an average WCA of 61.9° at pH 8.0. The binding of the hydrophobins to the positively charged surface was shown to depend on both pH and ionic strength. The results are significant for understanding the mechanism for formation of structures such as the surface of mycelia or fungal spore coatings as well as for possible technical applications.     

Energetics of electron transfer reactions in polar solvents

The free energy change of an electron transfer reaction in a polar solvent is rigorously analyzed within the framework of the dielectric continuum model. An appropriate expression for the electrostatic energy between the two product ions separated by R is derived. The present result does not support a recent claim by Suppan that, if R is close to the contact distance, the electrostatic energy should be much larger in magnitude than estimated from the usual expression −e²/ε_sR.     

Theory of migration-controlled electron-transfer reactions in polar solvents

A general solution of the problem of finding the rate constant of electron-transfer reactions in polar solvents without the restrictions of the diffusional approximation has been obtained. Expressions for the reaction rate constant at the limit of the random-jump mechanism, as well as a convenient equation describing the transition between the random-jump and diffusional reaction mechanisms, have been found. A test for identifying a random-jump electron-transfer mechanism has been proposed.Translated from Teoreticheskaya i Éksperimental'naya Khimiya, Vol. 21, No. 1, pp. 27–33, January–February, 1985.     

Solubility of sulphur dioxide in polar organic solvents

The solubility of sulphur dioxide in N,N-dimethylformamide, dimethyl sulphoxide, N,N-dimethyl acetamide, sulpholane, tributyl phosphate and diethanolamine has been determined. A solubility model is proposed and the solubilities calculated by the model show good agreement with experimental data.     

Computer simulation of cellulose solvation in polar solvents

The solvation of cellulose molecules in water and N-methylmorpholine N-oxide has been investigated by the molecular-dynamics method. An analysis of simulation results yields the conformational characteristics of cellulose molecules in these solvents: the mean-square distance between polymer chain ends and the radial distribution function of monomer units. The radial distribution functions of oxygen atoms of solvents relative to protons of carbohydrate molecules are estimated. This step makes it possible to draw conclusions about the number and character of hydrogen bonds and the local structure of solvate shells.