Structure and Bonding in Cyclic Sulfur-Nitrogen Compounds—Molecular Orbital Considerations

The molecular structures of monocyclic sulfur-nitrogen ring systems, such as S₂N₂, S₃N, S₄N and S₅N, can be considered as examples of electron rich (4n + 2)π systems. The structures of S₄N₄, S₄N, P₄S₄, As₄S₄ and the bicyclic structures S₄N, S₄N as well as S₅N₆ can be rationalized on the basis of a planar tetrasulfur tetranitride with 12π electrons.     

Physicochemical and Cytochemical Investigations on the Binding of Ethidium and Acridine Dyes to DNA and to Organelles in Living Cells

Ethidium and acridine dyes are classical model substances for studying the binding of small, pharmacologically active molecules to DNA. Intercalation between the DNA base pairs is nearly always proposed as the most important type of binding. According to our investigations, however, there is a second type of binding, which also occurs when the concentration of the bound molecules is low and will be referred to here as external or preintercalative binding. The experimental binding isotherms show that the binding constant for intercalation K_S1 is considerably smaller than that for external binding K_S2 (K_S1 > K_S2). This surprising result is not due to the binding enthalpy (ΔH ≈ ΔH) but to the binding entropy (ΔS > ΔS). Electrostatic interactions between the dye and the DNA represent the most important contribution to both types of binding; they are supplemented by hydrogen bonds and hydrophobic interactions. The behavior of a substance in living cells, however, cannot be reliably predicted from its in vitro binding to DNA. Very few substances are bound to the DNA of the nuclear chromatin in cell culture; for example, dyes often accumulate instead in the lysosomes. In some cases the dye binds specifically and very efficiently to the mitochondria of the living cell, especially to the mitochondrial membranes, the sites of oxidative phosphorylation.     

Destabilized Carbocations

Carbocations are intrinsically reactive species, and in early studies of their generation and properties the more accessible with stabilizing influences were naturally the prime objects of interest. Now, however, it is possible to extend the scope of these studies to include factors which tend to destabilize carbocations. By using the carbocations CH and C₂H as reference ions, such destabilizing factors can be defined; these include various structural factors, antiaromaticity effects, and the presence of electron-withdrawing substituents. Such factors can be studied by their effect on the thermodynamics of carbocations, their effect on reactivities, and by the spectroscopic properties of long-lived carbocations. Destabilized carbocations of this type are receiving increasing attention and promise to remain an active subject of investigation.     

Electrostatics,the Chemical Bond and Molecular Stability

Electrostatic models of the chemical bond are based on the Virial Theorem and hold promise for providing a reliable and accurate method for predicting heats of formation of molecules and free radicals. The Principle of Alternating Polarity which states that those compounds are most stable in which atoms of opposite polarity are bonded is shown to be quantitatively described by electrostatic models. Current fixed partial-charge models account for ΔH of hydrocarbon molecules and radicals. With inclusion of polarization effects, whose energies are small, they also account for the dipole moments in hydrocarbons. A brief account is given of a more general model with significant polarization interaction which is under development and which appears to be able to account for both ΔH and dipole moments of polar molecules.     

Ab initio study of the reaction of CHO+ with H2O and NH3

An MP4(full,SDTQ)/6-311++G(d,p)//MP2(full)/6-311++G(d,p) ab initio study was performed of the reactions of formyl and isoformyl cations with H₂O and NH₃, which play an important role in flame and interstellar chemistries. Two different confluent channels were located leading to CO+H₃O⁺/NH. The first one corresponds to the approach of the neutral molecule to the carbon atom of the cations. The second one leads to the direct proton transfer from the cations to the neutrals. At 900 K the separate products CO+H₃O⁺/NH are the most stable species along the Gibbs energy profiles for the processes. For the reaction with H₂O the reaction channel leading to HC(OH) (protonated formic acid) is disfavored with respect to the two CO+H₃O⁺ channels in agreement with the experimental evidence that H₃O⁺ is the major ion observed in hydrocarbon flames. According to our calculations, NH+H₂O are considerably more stable in Gibbs energy than NH₃+H₃O⁺;NH will predominate in the reaction zone when ammonia is added to CH₄+Ar diffusion flame, as experimentally observed. At 100 K the most stable structures are the intermediate complexes CO…HOH/HNH. Particularly the CO…HOH complex has a lifetime large enough to be detected and, therefore, could play a certain role in interstellar chemistry. ©1999 John Wiley & Sons, Inc. J Comput Chem 20: 1432–1443, 1999     

Über geordnete Perowskite mit Kationenfehlstellen. XI. Verbindungen vom Typ ABB□1/4WVIO6 ≙ ABIIB□WO24 mit AII,BII = Ba,Sr

On Ordered Perovskites with Cationic Vacancies. XI. Compounds of Type A B B □_1/4W^VIO₆ ? A B^IIB □W O₂₄ with A^II, B^II = Ba, Sr Depending on the ionic radii of the two and three valent cations in the perovskites of type ABB □_1/4W^VIO₆ ?; AB^IIB □WO₂₄ order disorder phenomena are present. The results of the x-ray and vibrational spectroscopic investigations as well as the diffuse reflectance spectra and the visible photoluminescence are reported.     

Schwingungsspektren und Kraftkonstanten der Übergangsreihe O2PF—S2PF— S2P(CH3)

Vibration spectra and force constants of the series O₂PF — S₂PF — S₂P(CH₃). The vibrational spectra of OSPF, S₂PF, S₂PF(CH₃) and S₂P(CN) are reported and discussed with O₂PF and S₂P(CH₃). On the basis of a simplified valence-force-field the force constants are calculated and the bonding relations are discussed. In the ions, f PF is lower than in corresponding molecules. The ionic charge is distributed over nearly all atoms of the ions.     

A theoretical study of the reaction of HCO+ with C2H2

A theoretical study was performed for the reaction of formyl cation and acetylene to give C₃H+O in flames and C₂H (nonclassical)+CO, both in flames and in interstellar clouds. The corresponding Potential Energy Surface (PES) was studied at the B3LYP/cc‐pVTZ level of theory, and single‐point calculations on the B3LYP geometries were carried out at the CCSD(T)/cc‐pVTZ level. Our results display a route to propynal evolving energetically under C₂H (nonclassical)+CO and, consequently, accessible in interstellar clouds conditions. This route connects the most stable C₃H₃O⁺ isomer (C2‐protonated propadienone) with a species from which propynal may be produced in a dissociative electron recombination reaction. The reaction channel to produce the C₃H+O evolves basically through two TSs and presents an endothermicity of 63.9 kcal/mol at 2000 K. According to our Gibbs energy profiles, the C2‐protonated propadienone is the most stable species at low–moderate temperatures and, consequently, could play a certain role in interstellar chemistry. On the contrary, in combustion chemistry conditions (2000 K) the C₂H (nonclassical)+CO products are the most thermodynamically favored species. © 2000 John Wiley & Sons, Inc. J Comput Chem 21: 35–42, 2000     

The role of d orbitals in tetrahedral hybrid orbitals of oxy-ions

The hybrid orbitals of tetrahedral oxy-ions containing some d character have been calculated by maximum overlap method. The d characters of hybrid orbitals increase in the order of SiO, PO, SO, ClO, and decrease in order of GeO, AsO, SeO, BrO. The bond strengths are also obtained for these ions. The hybrid Orbital of VO, CrO, and MnO are of the type d³s as the result of calculation.     

The Battle of Calicheamicin γ

The first total synthesis of calicheamicin γ was achieved approximately a year ago. In this article, the author presents a personal account of the events, in chronological order, that led to this success story in total synthesis.     

Assembly of Chiral Two- and Three-dimensional Copper(I) Pseudohalide Based Coordination Polymers with Asymmetrically Substituted Pyrazine and Pyrimidine Ligands

The coordination polymers [(CuCN)₂(μ-2 Mepyz)], [CuCN(μ-2 Mepyz)] and [CuCN(μ-4 Mepym)] ( 1 – 3 ) (2 Mepyz = 2-methylpyrazine; 4 Mepym = 4-methylpyrimidine) may be prepared by self-assembly in acetonitrile solution at 100 °C ( 1 , 3 ) or without solvent at 20 °C ( 2 ). All three contain [CuCN] chains that are bridged by the bidentate aromatic ligands into sheets in 1 and 3 D frameworks in 2 and 3 . Reaction of CuSCN with these heterocyclic diazines at 100 °C leads to formation of the lamellar coordination polymers [(CuSCN)(μ-2 Mepyz)] ( 4 ) and [CuSCN · (4 Mepym-κN1)] ( 5 ), which contain respectively [CuSCN] chains and trans-trans fused [CuSCN] sheets as substructures. The presence of an asymmetric substitution pattern in 2 Mepyz and 4 Mepym induces the adoption of a chiral structure by 2 and 5 (space groups P2₁2₁2₁ and P1).     

19F-NMR-spektroskopischer Nachweis und Berechnung der statistischen Bildung der gemischten Clusteranionen [(Mo6BrCl)F]2−, n = 0 – 8

¹⁹F NMR Spectroscopic Evidence and Calculation of the Statistical Formation of Mixed Cluster Anions [(Mo₆Br Cl )F ]^2?, n = 0 – 8 The complete system of the innersphere mixed clusters (Mo₆BrCl)⁴⁺ is formed by exchange of innersphere bound Clⁱ against outersphere bound Br^a on tempering the solid [(Mo₆Cl)Br] at 500°C for 16 h. After conversion with conc. HCl into (H₃O)₂[(Mo₆BrCl)Cl] and precipitation of the outer Cl^a with AgBF₄ in ethanol, treatment with tetrabutylammonium(TBA)fluoride yields (TBA)₂ [(Mo₆BrCl)F], a mixture of 22 different species. According to the sets of chemical equivalent fluorine atoms in total 55 ¹⁹F nmr signals are expected, which are really observed in the high resolution 1D-¹⁹F-nmr spectrum. Using increments of chemical shifts, peak intensities and multiplet structures as well as the 2D-¹⁹F/¹⁹F-COSY spectrum the complete and unambiguous assignment of all resonances is achieved. From the measured integral intensities the distribution of the different compounds is determined, revealing statistical formation of the geometrical isomers.     

The Catalytic Oxidative Coupling of Methane

One of the great challenges in the field of heterogeneous catalysis is the conversion of methane to more useful chemicals and fuels. A chemical of particular importance is ethene, which can be obtained by the oxidative coupling of methane. In this reaction CH₄ is first oxidatively converted into C₂H₆, and then into C₂H₄. The fundamental aspects of the problem involve both a heterogeneous component, which includes the activation of CH₄ on a metal oxide surface, and a homogeneous gas-phase component, which includes free-radical chemistry. Ethane is produced mainly by the coupling of the surface-generated CH radicals in the gas phase. The yield of C₂H₄ and C₂H₆ is limited by secondary reactions of CH radicals with the surface and by the further oxidation of C₂H₄, both on the catalyst surface and in the gas phase. Currently, the best catalysts provide 20% CH₄ conversion with 80% combined C₂H₄ and C₂H₆ selectivity in a single pass through the reactor. Less is known about the nature of the active centers than about the reaction mechanism; however, reactive oxygen ions are apparently required for the activation of CH₄ on certain catalysts. There is spectroscopic evidence for surface O^? or O ions. In addition to the oxidative coupling of CH₄, cross-coupling reactions, such as between methane and toluene to produce styrene, have been investigated. Many of the same catalysts are effective, and the cross-coupling reaction also appears to involve surface-generated radicals. Although a technological process has not been developed, extensive research has resulted in a reasonable understanding of the elementary reactions that occur during the oxidative coupling of methane.     

Dibrommethylsulfoniumsalze – Darstellung und Kristallstruktur [1]

Dibromomethylsulfoniumsalts — Preparation and Crystal Structure The salts CH₃SBrA^? (A^? = SbCl, AsF) were prepared by various routes and characterized by their Ramanspectra. CH₃SBrAsF crystallized in the monoclinic space group P2₁/c with a = 770,5(4) pm, b = 942,4(12) pm, c = 1329,3(14) pm, β = 100,28(6)°, Z = 4. Distances and bond angles in the cation are as expected.     

19F-NMR-spektroskopischer Nachweis und statistische Untersuchung zur Bildung der gemischten Clusteranionen [(Mo6ICl)F]2−, n = 0–7, und Darstellung von (TBA)2[(Mo6I)F]

¹⁹F NMR Spectroscopic Evidence and Calculation of the Statistical Formation of Mixed Cluster Anions [(Mo₆I Cl )F ]^2?, n = 0–7, and Preparation of (TBA)₂[(Mo₆I )F ] The octa-μ₃-iodo-hexafluoro-hexamolybdate(2?)ion [(Mo₆I)F]^2? is prepared for the first time. The system of the 21 innersphere mixed clusters (Mo₆ICl)⁴⁺, n = 0–7 is formed by exchange of innersphere bound Clⁱ against outersphere bound I^a on tempering solid [(Mo₆Cl)I] at 400°C. Prolonged tempering leads to increasing average n values of the mixture, which is converted into the tetrabutylammonium salt (TBA)₂[(Mo₆ICl)F]. Using increments of chemical shifts and integral peak intensities the 54 ¹⁹F-nmr signals of the 21 species (compound n = 8 is absent) are assigned and confirmed by the 2 D-¹⁹F/¹⁹F-COSY spectrum. From the measured intensities the distribution of the different compounds is determined and proves significant deviation from statistical occupation, revealing the preference of isomers with iodine atoms occupying edges of the innersphere cube and discrimination of those sharing diagonals of the faces. Moreover all compounds with n = 3 and 4 are present overaverage in comparison to the others.     

Photoelektronen-Spektren und Moleküleigenschaften. 133 [1, 2]. Trifluormethyldisulfan und Derivate F3CSSX (X  CF3, F,Cl, Br)

Photoelectron Spectra and Molecular Properties. 133. Trifluoromethyldisulfane and Derivates F₃CSSX (X?CF₃, F, Cl, Br) The He(I) photoelectron spectra of trifluoromethyldisulfane F₃CSSH and its derivatives F₃CSSX (X?CF₃, F, Cl, Br) are assigned by Koopmans correlations, IE = ?ε, with MNDO eigenvalues and by radical cation state comparison. Of special interest are the n/n splittings, which amount to 1.15 eV F₃C? SS? F or 0.87 eV in F₃? SS? Cl, and the dependance of which on the dihedral angle ω(XS? SX), on the SS bond length and on the acceptor effect of the F₃C substituents is discussed.     

Über geordnete Perowskite mit Kationenfehlstellen. X. Verbindungen vom Typ ABB□1/4MVIO6 ≙ ABIIB□MO24 mit AII,BII = Ba,Sr, Ca und MVI = U,W

On Ordered Perovskites with Cationic Vacancies. X. Compounds of Type A B B □_1/4M^VIO₆ ? A B^IIB □M O₂₄ with A^II, B^II = Ba, Sr, Ca and M^VI = U, W Perovskites of type Ba₈B^IIB₂^III□UO₂₄ show polymorphic phase transformations of order disorder type. An 1:1 ordered orthorhombic HT form is transformed into a higher ordered LT modification with a fourfold cell content (four formula units Ba₈B^IIB□U₄O₂₄), compared to cubic 1:1 ordered perovskites A₂BMO₆. In the series Ba₈BaB□W₄O₂₄ and Sr₈SrB□W₄O₂₄ different ordering phenomena are observed. In comparison with 1:1 ordered cubic perovskites A₂BMO₆, the cell contains eight formula units AB^IIB□W₄O₂₄. The higher ordered cells with U^VI and W^VI are face centered, which has its origin in an ordering of cationic vacancies.     

The proton affinity and the structure of protonated species of methylsilane

An ab initio LCAO-MO-SCF calculation was made on the proton affinity (PA ) of methylsilane (CH₃SiH₃) by using STO -3G, MIDI -1, and MIDI -1* basis sets. Three types of protonated methylsilane are taken into account, and their geometrical parameters are optimized. The calculated PA of CH₃SiH₃ is 160.5 kcal/mol, which exceeds that of SiH₄ by 11.5 kcal/mol. The protonated species (I) which refers to Si—C bond protonation is shown to be most favorable, and to be a weak σ-complex between CH₄ and SiH. Other two species are also σ-complexes between H₂ molecule and SiH₃CH or CH₃SiH, and similar to CH, SiH, GeH, and C₂H.     

Photoelectrochemistry with Colloidal Semiconductors; Laser Studies of Halide Oxidation in Colloidal Dispersions of TiO2 and α-Fe2O3

Aqueous sols of TiO₂ (anatase, particle radius 25 Å) were excited with (347.1 nm)-laser light and the reaction of valence-band holes with halide ions (X = I^?, Br^?, Cl^?) was investigated. Hole transfer takes place within the duration of the (10 ns)-laser pulse and results in the formation of anion radicals according to the sequence: The quantum yield of X increases in the order Cl < Br < I, attaining 0.8 for I at pH 1. It is affected by pH, halide concentration and the presence of a protective agent for the sol. RuO₂ deposited onto TiO₂ enhances markedly Cl and Br -formation, but has no effect on the yield of I. Laser-photolysis investigation of halide oxidation were also carried out with colloidal Fe₂O₃ (particle radius 600 Å). For I_2?formation, the quantum yield exceeds 0.9 indicating almost quantitative hole scavenging by iodide.     

Zur Kristallstruktur von OMF (M = Sb,Ru, Pt,Au)

On the Crystal Structure of O MF (M = Sb, Ru, Pt, Au) OMF (M = Sb, Ru, Pt, Au) were obtained again, but for the first time investigated by X-ray methods. Colourless OSbF and the rubyred compounds ORuF and OPtF crystallize isostructural in space group Ia3 -T_h⁷ (Nr. 206) with a = 1016(1) pm (Sb), a = 1002.6(9) pm (Ru) and a = 1003.6(9) pm (Pt), Z = 8. Yellow OAuF crystallizes trigonal-rhombohedric in space group R3 -D₃₂⁶ (Nr. 148) with a = 775.9(3) pm, c = 711.7(4) pm, Z = 3.