Stepwise construction of manganese-chromium carbonyl chalcogenide complexes: synthesis, electrochemical properties, and computational studies

When trigonal-bipyramidal clusters, [PPN][E(2)Mn(3)(CO)(9)] (E = S, Se), were treated with Cr(CO)(6) and PPNCl in a molar ratio of 1:1:2 or 1:2:2 in 4 M KOH/MeCN/MeOH solutions, mono-Cr(CO)(5)-incorporated HE(2)Mn(3)-complexes [PPN](2)[HE(2)Mn(3)Cr(CO)(14)] (E = S, [PPN](2)[1a]; Se, [PPN](2)[1b]), respectively, were formed. X-ray crystallographic analysis showed that 1a and 1b were isostructural and each displayed an E(2)Mn(3) square-pyramidal core with one of the two basal E atoms externally coordinated with one Cr(CO)(5) group and one Mn-Mn bond bridged by one hydrogen atom. However, when the TMBA(+) salts for [E(2)Mn(3)(CO)(9)](-) were mixed with Cr(CO)(6) in a molar ratio of 1:1 in 4 M KOH/MeOH solutions and refluxed at 60 °C, mono-Cr(CO)(3)-incorporated E(2)Mn(3)Cr octahedral clusters [TMBA](3)[E(2)Mn(3)Cr(CO)(12)] (E = S, [TMBA](3)[2a]; Se, [TMBA](3)[2b]), respectively, were obtained. Clusters 2a and 2b were isostructural, and each consisted of an octahedral E(2)Mn(3)Cr core, in which each Mn-Mn or Mn-Cr bond of the Mn(3)Cr plane was semibridged by one carbonyl ligand. Clusters 1a and 1b (with [TMBA] salts) underwent metal core closure to form octahedral clusters 2a and 2b upon treatment with KOH/MeOH at 60 °C. In addition, 1a and 1b were found to undergo cluster expansion to form di-Cr(CO)(5)-incorporated HE(2)Mn(3)-clusters [HE(2)Mn(3)Cr(2)(CO)(19)](2-) (E = S, 3a; Se, 3b), respectively, upon the addition of 1 or 2 equiv of Cr(CO)(6) heated in refluxing CH(2)Cl(2). Clusters 3a and 3b were structurally related to clusters 1a and 1b, but with the other bare E atom (E = S, 3a; Se, 3b) further externally coordinated with one Cr(CO)(5) group. The nature, cluster transformation, and electrochemical properties of the mixed manganese-chromium carbonyl sulfides and selenides were systematically discussed in terms of the chalcogen elements, the introduced chromium carbonyl group, and the metal skeleton with the aid of molecular calculations at the BP86 level of the density functional theory.     

Molecular docking studies,structural and spectroscopic properties of monomeric and dimeric species of benzofuran-carboxylic acids derivatives: DFT calculations and biological activities

Structural optimization, molecular docking analysis, electronic and vibrational properties have been investigated for the 1-benzofuran-2-carboxylic acid (2BF) and 1-benzofuran-3-carboxylic acid (3BF) using DFT/B3LYP/6-311++G(d,p) level of theory. The theoretical parameters have a very good consistency with the experimental ones. The weak intermolecular interactions were analyzed by different tool such as: Hirshfeld surfaces, topological analysis and natural bond orbital studies. The nonlinear optical properties have been investigated. Molecular electrostatic potential and frontier molecular orbitals (FMOs) analysis have been carried out to understand the reactivity of the molecule. In addition, TD-DFT calculation is initiated to simulate the UV–vis absorption spectrum and to determine several important electronic properties like HOMO-LUMO gap energy and electronic transitions. The complete vibrational assignments and the force constants were reported for monomer and dimers of both acids. The biological activities of the tow acids have been studied via molecular docking analysis. The later calculations prove that the studied acids have an inhibitor effect against cancer and microbial diseases.     

Structure-reactivity relationship of piperidine nitroxide: electrochemical, ESR and computational studies

We have synthesized several nitroxides with different substituents which vary the steric and electronic environment around the N-O moiety and have systematically investigated the role of substituents on the stability of the radicals. Our results demonstrated the reactivity toward ascorbate correlates with the redox potential of the derivatives. Furthermore, ab initio calculations also indicated a correlation between the reduction rate and the computed singly occupied molecular orbital-lowest unoccupied molecular orbital energy gap, but not with solvent accessible surface area of the N-O moiety, supporting the experimental results and suggesting that the electronic factors largely determine the radicals' stability. Hence, it is possible to perform virtual screening of nitroxides to optimize their stability, which can help to rationally design novel nitroxides for their potential use in vivo.     

Synthesis,redox properties,and basicity of substituted 1-aminoanthraquinones: spectroscopic,electrochemical, and computational studies in acetonitrile solutions

1-Amino-, 1-ethylamino-, and 1-(diethylamino)-anthraquinone were characterized by UV–Vis spectroscopy, acid–base titration, electrochemical methods, and quantum-chemical (QM) calculations at the B3LYP/6-31 ++G^** level. Acid–base titration and the relative differences between the free energies of the basic and acidic forms of the studied species show that 1-(diethylamino)anthraquinone is the strongest base in an acetonitrile solution. Moreover, the structural differences between the B3LYP-optimized neutral and protonated anthraquinones, notably the presence or the absence of internal hydrogen bonds, account well for the sequence of the measured/calculated basicity. The basicity of the investigated compounds strongly influences their electrochemical properties in acetonitrile. Indeed, the cyclic voltammograms of 1-aminoanthraquinone and 1-(ethylamino)anthraquinone display two well-resolved reduction waves that indicate a two-step reduction process (EE mechanism). On the other hand, the electroreduction of 1-(diethylamino)anthraquinone becomes complicated by the interaction of its reduced forms with traces of water present in an acetonitrile solution (ECE mechanism). The mechanism of this reaction is proposed, and its possibility to occur is examined based on QM calculations.     

Structural, energetic, and electronic properties of hydrogenated titanium clusters

Hydrogen undergoes dissociative chemisorption on small titanium clusters. How the electronic structure of the cluster changes as a function of the number of adsorbed hydrogen atoms is an important issue in nanocatalysis and hydrogen storage. In this paper, a detailed theoretical investigation of the structural, energetic, and electronic properties of the icosahedral Ti13 cluster is presented as a function of the number of adsorbed hydrogen atoms. The results show that hydrogen loaded Ti13H20 and Ti13H30 clusters are exceptionally stable and are characterized by hydrogen multicenter bonds. In Ti13H20, the dissociated hydrogen atoms are bound to each of the 20 triangular faces of Ti13, while in Ti13H30, they are bound to the 30 Ti-Ti edges of Ti13. Consequently, the chemisorption and desorption energies of the Ti13H20 (1.93 eV, 3.10 eV) are higher than that of Ti13H30 (1.13 eV, 1.95 eV). While increased hydrogen adsorption leads to an elongation of the Ti-Ti bonds, there is a concomitant increase in the electrostatic interaction between the dissociated hydrogen atoms and the Ti13 cluster. This enhanced interaction results from the participation of the subsurface titanium atom at higher hydrogen concentrations. Illustrative results of hydrogen saturation on the larger icosahedral Ti55 cluster are also discussed. The importance of these results on hydrogen saturated titanium clusters in elucidating the mechanism of hydrogen adsorption and desorption in titanium doped complex metal hydrides is discussed.     

Structural and electronic properties of boron-doped lithium clusters: ab initio and DFT studies

The lowest-energy structures and electronic properties of the BLi(n) (n = 1-7) clusters are reported using the B3LYP, MP2, and CCSD(T) methods with the aug-cc-pVDZ basis set. Though the results at the B3LYP level agree well with those at the CCSD(T) level, the MP2 method is rather unsatisfactory. The first three-dimensional ground state in the BLi(n) clusters occurs for BLi(4), and the impurity B atom is seen to be trapped in a Li cage from the BLi(6) cluster onwards. The evolution of the binding energies, vertical ionization potentials, and polarizability with size of cluster shows the BLi(5) cluster to be most stable among the BLi(n) clusters. Besides, the BLi(5) cluster is also found to have the largest reaction enthalpy (49.8 kcal/mol) upon losing a Li atom, which is different from the previous prediction. The unique stability of the 8-valence electron BLi(5) can be understood from the cluster electronic shell model (CSM). However, in contradiction to the prediction of the CSM, the 2s level is filled prior to the 1d level in the BLi(n) clusters.     

Structural evolution and stabilities of neutral and anionic clusters of lead sulfide: joint anion photoelectron and computational studies

The geometric and electronic structures of both neutral and negatively charged lead sulfide clusters, (PbS)(n)/(PbS)(n)(-) (n = 2-10) were investigated in a combined anion photoelectron spectroscopy and computational study. Photoelectron spectra provided vertical detachment energies (VDEs) for the cluster anions and estimates of electron affinities (EA) for their neutral cluster counterparts, revealing a pattern of alternating EA and VDE values in which even n clusters exhibited lower EA and VDE values than odd n clusters up until n = 8. Computations found neutral lead sulfide clusters with even n to be thermodynamically more stable than their immediate (odd n) neighbors, with a consistent pattern also being found in their HOMO-LUMO gaps. Analysis of neutral cluster dissociation energies found the Pb(4)S(4) cube to be the preferred product of the queried fragmentation processes, consistent with our finding that the lead sulfide tetramer exhibits enhanced stability; it is a magic number species. Beyond n = 10, computational studies showed that neutral (PbS)(n) clusters in the size range, n = 11-15, prefer two-dimensional stacking of face-sharing lead sulfide cubical units, where lead and sulfur atoms possess a maximum of five-fold coordination. The preference for six-fold coordination, which is observed in the bulk, was not observed at these cluster sizes. Taken together, the results show a preference for the formation of slightly distorted, fused cuboids among small lead sulfide clusters.     

Synthesis,spectral, magnetic and electrochemical properties of new dimeric copper(II) complexes

Four new ligands, bis-[3,5-disubstituted-2-hydroxybenzyl]-N-alkylamines (L¹–L⁴) with three potential donor sites, capable of forming dimeric copper(II) complexes have been prepared. The dimeric nature of the complexes has been confirmed by FAB mass spectral studies. Molar conductance studies indicate that the complexes are neutral. Electrochemical studies indicate that the complexes undergo quasi reversible two step single electron transfers at negative potentials (E_pc¹=−0.34 to −0.48 V, E_pc²=−0.59 to −0.72 V). Variable temperature magnetic studies indicate that the complexes are antiferromagnetically coupled (−2J=290 to 400 cm⁻¹). ESR spectral studies in DMF indicate that the complexes are dimeric and undergo dissociation on addition of pyridine.     

Structural,magnetic, and vibrational properties of stoichiometric clusters of CrN

We performed density‐functional‐theoretic calculations to investigate the structural, magnetic and vibrational properties of the stoichiometric clusters (CrN)_n ( ). We show that the building block of the ground‐state structures of these clusters is a square CrNCrN unit; the only exception with n > 2 occurs for (CrN)₃, but this cluster has an isomer not very far in energy from the ground state consisting of a pair of CrNCrN squares sharing a CrN bond. In the smaller CrN, (CrN)₂, and (CrN)₃ clusters the magnetic moments of the N atoms are non‐negligible and antiparallel to those of the Cr atoms, but for the larger species (CrN)₄, (CrN)₅, (CrN)₆, and (CrN)₉ the cluster magnetic moments are almost entirely due to the Cr atoms. Lack of imaginary vibrational frequencies in the predicted ground‐state structures of (CrN)_n ( ) confirms that they are mechanically stable equilibrium states. © 2015 Wiley Periodicals, Inc.     

Structural, electronic, and chemical properties of multiply iodized aluminum clusters

The electronic structure, stability, and reactivity of iodized aluminum clusters, which have been investigated via reactivity studies, are examined by first-principles gradient corrected density functional calculations. The observed behavior of Al13I(x)- and Al14I(x)- clusters is shown to indicate that for x < or = 8, they consist of compact Al13- and Al14++ cores, respectively, demonstrating that they behave as halogen- or alkaline earth-like superatoms. For x > 8, the Al cores assume a cagelike structure associated with the charging of the cores. The observed mass spectra of the reacted clusters reveal that Al13I(x)- species are more stable for even x while Al14I(x)- exhibit enhanced stability for odd x(x > or = 3). It is shown that these observations are linked to the formation and filling of "active sites," demonstrating a novel chemistry of superatoms.     

Ruthenium complexes with lumazine derivatives: structural,electrochemical, computational and radical scavenging studies

In this research study, the formation and characterization of new ruthenium(II) and (III) complexes encompassing multidentate ligands derived from 6-acetyl-1,3,7-trimethyllumazine (almz) are reported. The 1:1 molar coordination reactions of trans-[RuCl₂(PPh₃)₃] with N-1-[1,3,7-trimethyllumazine]benzohydride (bzlmz) and 6-(N-methyloxime)-1,3,7-trimethyllumazine (ohlmz) formed a diamagnetic ruthenium(II) complex, cis-[RuCl₂(bzlmz)(PPh₃)] (1), and paramagnetic complex, cis-[Ru^IIICl₂(olmz)(PPh₃)] (2) [Holmz = 6-(N-hydroxy-N′-methylamino)-1,3,7-trimethyllumazine], respectively. These ruthenium complexes were characterized via physico-chemical and spectroscopic methods. Structural elucidations of the metal complexes were confirmed using single crystal X-ray analysis. The redox properties of the metal complexes were investigated via cyclic voltammetry. Electron spin resonance spectroscopy confirmed the presence of a paramagnetic metal centre in 2. The radical scavenging activities of the metal complexes were explored towards the DPPH and NO radicals. Quantum calculations at the density functional theory level provided insight into the interpretation of the IR and UV–Vis experimental spectra of 1.     

Structural and electrochemical studies on trithia macrocyclic complexes of palladium

The single crystal X-ray structure of [Pd(1)₂](PF₆)₂ (1 = 1,4,7-trithiacyclononane) shows a crystallographically centrosymmetric cation with a distorted octahedral stereochemistry about the Pd^II centre with PdS_eq 2.332(3) and 2.311(3) Å for the equatorial thia donors, and PdS_ax 2.952(4) Å for the two apically coordinated donors. The crystals have space group C2/C, with a 17.879(8), b 15.627(13), c 11.476(8) Å, β 125.92(4)° and Z = 4. Least squares refinement gave R = 0.0565 for 1153 unique observed reflections measured by counter diffracometry using Mo-K_α radiation. This green complex undergoes a chemically reversible, one-electron oxidation in CH₃CN, E_pa = +0.65V, E_pc = +0.56 V vs. Fc/Fc⁺, ΔE_p = 84 mV. Oxidation of [Pd(1)₂](PF₆)₂ by controlled potential electrolysis at +0.7 V affords an orange, ESR active product which may be tentatively assigned to the corresponding palladium(III) species. These results are contrasted with data for the related homoleptic thia complexes [Pd(L)]²⁺ (L = 1,4,8,11-tetrathiacyclotetradecane (2), 1,4,7,10,13,16-hexathiacyclooctadecane (3)). The syntheses of the complexes cis-[Pd(1)Cl₂], cis-[Pt(1)Cl₂], cis-[Pd(1)(PPh₃)₂](PF₆)₂ and cis-[Pt(1)(PPh₃)₂](PF₆)₂ are also described.     

Cryogenic fluorescence and absorption spectroscopy studies on monomeric and dimeric species of 2-butylamino-6-methyl-4-nitropyridine N-oxide

2-Butylamino-6-methyl-4-nitropyridine-N-oxide (2B6M) belongs to a group of compounds that can undergo not only excited-state intra-, but also intermolecular proton transfer. The latter of course requires the presence of dimeric species. Previously, we have shown that for 2B6M in aprotic non-polar solvents in the liquid state such dimers play no role. Under these conditions, only one single monomeric species exists, exhibiting anomalous fluorescence behavior, i.e. proton transfer not only starting from the lowest excited electronic singlet state, but also from higher excited states. However, we also noted that under frozen, crystalline matrix conditions more species show up in the spectra. In order to study this multi-species system in more detail, we present absorption and fluorescence experiments on 2B6M, recorded in n-octane at various temperatures between 293 and 5 K. High-resolution spectra are included, not only in fluorescence but also in absorption. We demonstrate that under cryogenic conditions three species can be discerned, two of these providing high-resolution spectra with their main 0-0 lines around 452 and 465 nm, respectively. A detailed vibrational analysis of their emission spectra is included. The third species gives broad-banded spectra, in absorption extending to about 520 nm with its long-wavelength maximum around 460 nm, in emission with a maximum around 535 nm. We tentatively assign the three species to a monomer, a H-bonded dimer and a strongly interacting (pi-pi-stacked) dimer, respectively. We conclude from the excitation spectra that (anomalous) intramolecular proton transfer at higher excited states is still operative under cryogenic conditions. Indications for excited-state intermolecular proton transfer in the stacked dimeric species were not found.     

Synthesis, structure, and properties of a dimeric chromium(II) pyrazolato complex with a long chromium-chromium distance. Maintenance of a dimeric structure in solution and interconversion between dimeric and monomeric structures

The synthesis, solid-state structure, and solution structure of Cr2(tBu2pz)4 are described. This complex is obtained by sublimation of the monomeric species Cr(tBu2pz)2(4-tBupy)2 and contains long chromium-chromium distances that are enforced by the divergent nature of the pyrazolato ligands.     

Structural effect on the electrochemical properties of polythiophene and derivatives

Grafted polythiophenes behave like modified electrodes, and even at large thicknesses, the whole film is electroactive. Due to the fibrillar structure of these polymers, the dopants do not modify the electrochemical characteristics, and the solvent has only a slight influence. When bulky groups are substituted on the β-carbon atoms in the thiophene unit, steric factors increase rapidly and render the oxidation and the reduction more and more difficult, owing to the loss of conjugation in the polymeric chains.     

Computational examination on monomeric,dimeric, trimeric structural and vibrational interactions,AIM, Hirshfeld,IGM and oxygenated solvent effect on optical properties for pyridine N-oxide

This work reports DFT (Density functional theory) and topological examination by means of AIM (Atom in molecule) theory, Laplacian electron density (ED), Electron –Localization function (ELF) and Hirshfeld surface were executed monomer, dimer and trimer structure of PNO molecule. These structures were optimized and Structural parameters like bond – length and Angles are compared by using B3LYP/6-311G++(d,p) basis set. Computed vibrational – frequencies and corresponding PED (Potential energy – Distribution) were also compared. Polarizability, Dipole moment and the electronic properties were calculated for all three cases of PNO molecule. Hirshfeld surface investigation has been executed to achieve the C–H?O/N–O?H type of hydrogen -bond intermolecular interactions. Moreover, Reactive site, inter/intra interactions are calculated, the optical behaviors for monomer structure of PNO were investigate by using UV–Vis spectroscopy in oxygenated solvents.     

Solution properties, electrochemical behavior and protein interactions of water soluble triosmium carbonyl clusters

The synthesis and solution chemistry of the water soluble clusters [Os₃(CO)₉(μ-η²-Bz)(μ-H)L⁺] (HBz=quinoxaline, L⁺=[P(OCH₂CH₂NMe₃)₃I₃], 1) along with its negatively charged analog [Os₃(CO)₉(μ-η²-Bz)(μ-H)L⁻] (L⁻=[P(C₆H₄SO₃)₃Na₃], 2) are reported. In addition, we have examined the reduction potentials of the complexes [Os₃(CO)₉(μ-η²-Bz)(μ-H)L] (HBz=phenanthridine, L=L⁺ (3); HBz=5,6 benzoquinoline, L=L⁺ (4); HBz=3-amino quinoline, L=L⁺ (5); HBz=3-amino quinoline, L=L⁻ (6). The neutral analog of 1 and 2 [Os₃(CO)₉(μ-η²-Bz)(μ-H) PPh₃] (Bz=quinoxaline, 7) was also examined for comparison. Both compounds 1 and 2 show pH dependent NMR spectra that are interpreted in terms of the extent of protonation of the uncoordinated quinoxaline nitrogen which impacts the degree of aggregation of the clusters in aqueous solution. Compound 1 undergoes a reversible 1e⁻ reduction in water while 2 undergoes a quasi-reversible 1e⁻ reduction at more negative potentials as expected from the difference in charge on the phosphine ligand. Compound 7 undergoes a marginally reversible CV in methylene chloride at a potential intermediate between the positively and negatively charged clusters. The overall stability of the radical anions of 1, 2 and 7 is somewhat less than the corresponding decacarbonyl [Os₃(CO)₁₀(μ-η²-Bz)(μ-H)] (HBz=quinoxaline). While complexes 1 and 2 show reversible 1e⁻ reductions, all the other complexes examined show 1e⁻ and/or two 1e⁻ irreversible reductions in aqueous and non-aqueous solvents. The potentials for these complexes follow expected trends relating to the charge on the phosphine and the pH of the aqueous solutions. The ligand dependent trends are compared with those of the previously reported corresponding decacarbonyls. The interactions of the positively and negatively charged clusters with albumin have been investigated using the transverse and longitudinal relaxation times of the hydride resonances as probes of binding to the protein. Evidence of binding is observed for both the positive and negative clusters but the positive and negative clusters exhibit distinctly different rotational correlation times. Two additional complexes [Os₃(CO)₉(μ-η²-Bz)(μ-H)L] (HBz=2-methylbenzimidazole, L=L⁺ (8); L=L⁻ (10) and HBz=quinoline-4-carboxaldehyde, L=L⁺ (9); L=L⁻ (11)) are reported in connection with these studies.     

Syntheses, structures, and redox properties of dimeric triruthenium clusters bridged by bis(diphenylphosphino)acetylene and -ethylene

Reactions of oxo-centered triruthenium acetate complexes [Ru3O(OAc)6(py)2(CH3OH)](PF6) (py = pyridine, OAc = CH3COO-) (1) with nearly equimolar amounts of dppa [bis(diphenylphosphino)acetylene] or dppen [trans-1,2-bis(diphenylphosphino)ethylene] gave [Ru3O(OAc)6(py)2(L)](PF6) (L = dppa, 2; dppen, 3). With 2.4 equiv of 1, the reactions provided diphosphine-linked triruthenium dimers, [[Ru3O(OAc)6(py)2]2(L)](PF6)2 (L = dppa, 4; L = dppen, 5), respectively. Similarly, the reactions of [Ru3O(OAc)6(L')2(MeOH)]+ [L' = dmap (4-(dimethylamino)pyridine), 1a; L' = abco (1-azabicyclo[2.2.2]octane), 1b] with dppen gave dppen-linked dimers, [[Ru3O(OAc)6(dmap)2]2(dppen)](SbF6)2 (6) and [[Ru3O(OAc)6(abco)2]2(dppen)](BF4)2 (7), respectively. The chemical reduction of 2, 4, and 5 by hydrazine afforded one- or two-electron-reduced, neutral products, Ru3O(OAc)6(py)2(dppa) (2a), [Ru3O(OAc)6(py)2]2(dppa) (4a), and [Ru3O(OAc)6(py)2]2(dppen) (5a), respectively. The complexes were characterized by elemental analyses, ES-MS, UV-vis, IR, and 31P NMR spectroscopies, and cyclic and differential-pulse voltammetries. The molecular structures of compounds 2, 4, 5, 5a, 6, and 7 were determined by single-crystal X-ray diffraction. In 0.1 M (Bu4N)PF6-acetone, the monomers and dimers of triruthenium clusters show reversible and multistep redox responses. The two triruthenium cluster centers in dimers undergo stepwise reductions and oxidations due to the identical redox processes of the individual Ru3O cluster cores, suggesting the presence of electronic communications between them through the conjugated diphosphine spacer. The redox wave splitting mediated by dppa containing an ethynyl group (C triple bond C) is found to be more extensive than that by dppen containing an ethenyl (C=C) one. It appears that the redox wave splitting is enhanced by the introduction of electron-donating substituents on the auxiliary pyridine rings.