Thiophenol-mediated hydrogen atom abstraction: an efficient tin-free procedure for the preparation of cyclopentane derivatives

[reaction: see text] An efficient procedure for running a cascade reaction involving 1,5-abstraction of a hydrogen atom followed by a radical cyclization is reported. Alkenyl radicals are generated from easily available terminal alkynes and thiophenol. This procedure eliminates the need of using the toxic tributyltin hydride and gives a greater amount of radical translocation products.     

Mechanism of the hydrogen transfer from the OH group to oxygen-centered radicals: proton-coupled electron-transfer versus radical hydrogen abstraction

High-level ab initio electronic structure calculations have been carried out with respect to the intermolecular hydrogen-transfer reaction HCOOH+.OH-->HCOO.+H(2)O and the intramolecular hydrogen-transfer reaction .OOCH2OH-->HOOCH(2)O.. In both cases we found that the hydrogen atom transfer can take place via two different transition structures. The lowest energy transition structure involves a proton transfer coupled to an electron transfer from the ROH species to the radical, whereas the higher energy transition structure corresponds to the conventional radical hydrogen atom abstraction. An analysis of the atomic spin population, computed within the framework of the topological theory of atoms in molecules, suggests that the triplet repulsion between the unpaired electrons located on the oxygen atoms that undergo hydrogen exchange must be much higher in the transition structure for the radical hydrogen abstraction than that for the proton-coupled electron-transfer mechanism. It is suggested that, in the gas phase, hydrogen atom transfer from the OH group to oxygen-centered radicals occurs by the proton-coupled electron-transfer mechanism when this pathway is accessible.     

Ab initio group contribution method for activation energies of hydrogen abstraction reactions.

The group contribution method for activation energies is applied to hydrogen abstraction reactions. To this end an ab initio database was constructed, which consisted of activation energies calculated with the ab initio CBS-QB3 method for a limited set of well-chosen homologous reactions. CBS-QB3 is shown to predict reaction rate coefficients within a factor of 2-4 and Arrhenius activation energies within 3-5 kJ mol(-1) of experimental data. Activation energies in the set of homologous reactions vary over 156 kJ mol(-1) with the structure of the abstracting radical and over 94 kJ mol(-1) with the structure of the abstracted hydrocarbon. The parameters required for the group contribution method, the so-called standard activation group additivity values, were determined from this database. To test the accuracy of the group contribution method, a large set of 88 additional activation energies were calculated from first principles and compared with the predictions from the group contribution method. It was found that the group contribution method yields accurate activation energies for hydrogen-transfer reactions between hydrogen molecules, alkylic hydrocarbons, and vinylic hydrocarbons, with the largest deviations being less than 6 kJ mol(-1). For reactions between allylic and propargylic hydrocarbons, the transition state is believed to be stabilized by resonance effects, thus requiring the introduction of an appropriate correction term to obtain a reliable prediction of the activation energy for this subclass of hydrogen abstraction reactions.     

Computational studies on the cyclization of polycyclic aromatic hydrocarbons in the synthesis of curved aromatic derivatives.

Computational studies on the cyclization reactions of some polycyclic aromatic hydrocarbons (PAHs) were performed at the DFT level. Compounds C26H14 and C24H14, which show the connectivity of C60 fullerene fragments, were chosen as suitable models to study the formation of curved derivatives by six- or five-membered ring formation, upon oxidation to their radical cations. Four possible pathways for the cyclization process were considered: a) initial C-C bond formation to afford a curved derivative, followed by dehydrogenation; b) homolytic C-H cleavage prior to cyclization; c) initial concerted H2 elimination and subsequent cyclization; and d) deprotonation of the radical cations prior to cyclization. Computed reaction and activation energies for these reactions show that direct cyclization from radical cations (pathway a) is the lowest-energy mechanism. The formation of five-membered rings is somewhat more favourable than benzannulation. After new cycle formation, homolytic C-H dissociation to afford the corresponding cations is the most favourable process. These cations react with H* without barrier to give H2* Intermediate deprotonations are strongly disfavoured. The relatively low activation energies compared with carbon cage rearrangements suggest that ionization of PAHs can be used for the tailored preparation of nonplanar derivatives from suitable precursors.     

The Profound Effect of the Ring Size in the Electrocyclic Opening of Cyclobutene‐Fused Bicyclic Systems

Fused cyclobutenes, prepared by the photocycloaddition of propargyl alcohols to cyclic anhydride chromophores, undergo facile thermochemical ring opening to fused γ‐lactones. The size of the fused ring profoundly influences the temperature that is required to facilitate the ring opening (from 50 °C to 180 °C) and the nature of the product that is formed. Our studies provide new insights into the mechanistic course of these reactions and have been extended to facilitate the preparation of lactams fused to medium‐sized rings.     

Hydrogen atom abstraction reactions of the sugar moiety of 2′‐deoxyguanosine with an OH radical: A quantum chemical study

Mechanisms of hydrogen atom abstraction reactions of the sugar moiety of 2′‐deoxyguanosine with an OH radical were investigated using the B3LYP and BHandHLYP functionals of density functional theory and the second order Møller–Plesset Perturbation (MP2) theory in gas phase and aqueous media. The 6‐31+G* and AUG‐cc‐pVDZ basis sets were used. Gibbs free barrier energies and rate constants of the reactions in aqueous media suggest that an OH radical would abstract the hydrogen atoms of the sugar moiety of 2′‐deoxyguanosine in the following order of preference: H5′ ≈ H5″ > H3′ > H4′ > H1′ ≈ H2′ > H2″, the rate constant for H5′ abstraction being 10³–10⁵ times greater than that for H2″ at the different levels of theory. Relative stabilities of the different deoxyribose radicals are also discussed. The most and least favored hydrogen abstraction reactions found here are in agreement with experimental observation. © 2010 Wiley Periodicals, Inc. Int J Quantum Chem, 2011     

Three tetracyclic dibenzoazepine derivatives exhibiting different molecular conformations,different patterns of intermolecular hydrogen bonding and different modes of supramolecular aggregation

The biological potential of compounds of the tricyclic dibenzo[b ,e ]azepine system has resulted in considerable synthetic efforts to develop efficient methods for the synthesis of new derivatives of this kind. (9RS ,15RS )‐9‐Ethyl‐11‐methyl‐9,13b‐dihydrodibenzo[c ,f ]thiazolo[3,2‐a ]azepin‐3(2H )‐one, C₁₉H₁₉NOS, (I), crystallizes as a kryptoracemate with Z ′ = 2 in the space group P 2₁, with one molecule each of the (9R ,15R ) and (9S ,15S ) configurations in the asymmetric unit, while (9RS ,15RS )‐9‐ethyl‐7,12‐dimethyl‐9,13b‐dihydrodibenzo[c ,f ]thiazolo[3,2‐a ]azepin‐3(2H )‐one, C₂₀H₂₁NOS, (II), crystallizes with Z ′ = 1 in the space group C 2/c . Ethyl (13RS )‐2‐chloro‐13‐ethyl‐4‐oxo‐8,13‐dihydro‐4H‐benzo[5,6]azepino[3,2,1‐ij ]quinoline‐5‐carboxylate, C₂₂H₂₀ClNO₃, (III), exhibits enantiomeric disorder in the space group P such that the reference site is occupied by the 13R and 13S enantiomers, with occupancies of 0.900 (6) and 0.100 (6). In each of the two independent molecules in (I), the five‐membered ring adopts an envelope conformation, but the corresponding ring in (II) adopts a half‐chair conformation, while the six‐membered ring in the major form of (III) adopts a twist‐boat conformation. The conformation of the seven‐membered ring in each of (I), (II) and the major form of (III) approximates to the twist‐boat form. The molecules of compound (I) are linked by two C—H…O hydrogen bonds to form two independent antiparallel C (5) chains, with each type containing only one enantiomer. These chains are linked into sheets by two C—H…π(arene) hydrogen bonds, in which the two donors are both provided by the (9R ,15R ) enantiomer and the two acceptor arene rings form part of a molecule of (9S ,15S ) configuration, precluding any additional crystallographic symmetry. The molecules of compound (II) are linked by inversion‐related C—H…π(arene) hydrogen bonds to form isolated cyclic centrosymmetric dimers. The molecules of compound (III) are linked into cyclic centrosymmetric dimers by C—H…O hydrogen bonds and these dimers are linked into chains by a π–π stacking interaction. Comparisons are made with some related structures.     

FeCl3‐Mediated Three‐Component Cascade Reaction: An Effective Approach to the Construction of Highly Functionalized Pyrrolo[1,2‐c]quinazolinones

An unexpected FeCl₃‐mediated three‐component cascade reaction has been used to construct structurally diverse pyrrolo[1,2‐c]quinazolinone derivatives with potential biological activities. This method has advantages of mild conditions, simple work‐up, as well as wide substrate scope, which makes it a powerful approach to the synthesis of diverse pyrrolo[1,2‐c]quinazolinones. This cascade reaction involves 1,3‐dipolar cycloaddition between azomethine ylides and allenoates, followed by intramolecular nucleophilic addition in the presence of FeCl₃. The obtained products could be easily transformed into derivatives with the pyrrolo[2,3‐c]quinazoline alkaloid skeleton.     

Novel miktofunctional initiator for the preparation of an ABC‐type miktoarm star polymer via a combination of controlled polymerization techniques

An ABC‐type miktoarm star polymer was prepared with a core‐out method via a combination of ring‐opening polymerization (ROP), stable free‐radical polymerization (SFRP), and atom transfer radical polymerization (ATRP). First, ROP of ϵ‐caprolactone was carried out with a miktofunctional initiator, 2‐(2‐bromo‐2‐methyl‐propionyloxymethyl)‐3‐hydroxy‐2‐methyl‐propionic acid 2‐phenyl‐2‐(2,2,6,6‐tetramethyl‐piperidin‐1‐yl oxy)‐ethyl ester, at 110 °C. Second, previously obtained poly(ϵ‐caprolactone) (PCL) was used as a macroinitiator for SFRP of styrene at 125 °C. As a third step, this PCL–polystyrene (PSt) precursor with a bromine functionality in the core was used as a macroinitiator for ATRP of tert‐butyl acrylate in the presence of Cu(I)Br and pentamethyldiethylenetriamine at 100 °C. This produced an ABC‐type miktoarm star polymer [PCL–PSt–poly(tert‐butyl acrylate)] with a controlled molecular weight and a moderate polydispersity (weight‐average molecular weight/number‐average molecular weight < 1.37). The obtained polymers were characterized with gel permeation chromatography and ¹H NMR. © 2004 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 42: 4228–4236, 2004     

Six polycyclic pyrimidoazepine derivatives: syntheses,molecular structures and supramolecular assembly

A versatile synthetic method has been developed for the formation of variously substituted polycyclic pyrimidoazepine derivatives, formed by nucleophilic substitution reactions on the corresponding chloro‐substituted compounds; the reactions can be promoted either by conventional heating in basic solutions or by microwave heating in solvent‐free systems. Thus, (6RS)‐6,11‐dimethyl‐3,5,6,11‐tetrahydro‐4H‐benzo[b]pyrimido[5,4‐f]azepin‐4‐one, C₁₄H₁₅N₃O, (I), was isolated from a solution containing (6RS)‐4‐chloro‐8‐hydroxy‐6,11‐dimethyl‐6,11‐dihydro‐5H‐benzo[b]pyrimido[5,4‐f]azepine and benzene‐1,2‐diamine; (6RS)‐4‐butoxy‐6,11‐dimethyl‐6,11‐dihydro‐5H‐benzo[b]pyrimido[5,4‐f]azepin‐8‐ol, C₁₈H₂₃N₃O₂, (II), was formed by reaction of the corresponding 6‐chloro compound with butanol, and (RS)‐4‐dimethylamino‐6,11‐dimethyl‐6,11‐dihydro‐5H‐benzo[b]pyrimido[5,4‐f]azepin‐8‐ol, C₁₆H₂₀N₄O, (III), was formed by reaction of the chloro analogue with alkaline dimethylformamide. (6RS)‐N‐Benzyl‐8‐methoxy‐6,11‐dimethyl‐6,11‐dihydro‐5H‐benzo[b]pyrimido[5,4‐f]azepin‐4‐amine, C₂₂H₂₄N₄O, (IV), (6RS)‐N‐benzyl‐6‐methyl‐1,2,6,7‐tetrahydropyrimido[5′,4′:6,7]azepino[3,2,1‐hi]indol‐8‐amine, C₂₂H₂₂N₄, (V), and (7RS)‐N‐benzyl‐7‐methyl‐2,3,7,8‐tetrahydro‐1H‐pyrimido[5′,4′:6,7]azepino[3,2,1‐ij]quinolin‐9‐amine, C₂₃H₂₄N₄, (VI), were all formed by reaction of the corresponding chloro compounds with benzylamine under microwave irradiation. In each of compounds (I)–(IV) and (VI), the azepine ring adopts a conformation close to the boat form, with the C‐methyl group in a quasi‐equatorial site, whereas the corresponding ring in (V) adopts a conformation intermediate between the twist‐boat and twist‐chair forms, with the C‐methyl group in a quasi‐axial site. No two of the structures of (I)–(VI) exhibit the same range of intermolecular hydrogen bonds: different types of sheet are formed in each of (I), (II), (V) and (VI), and different types of chain in each of (III) and (IV).     

Possible molecular hydrogen formation mediated by the radical cations of anthracene and pyrene

Hydrogen molecules cannot be formed readily by the association of gaseous hydrogen atoms. Possible H(2) formation mediated by the radical cations of typical polycyclic aromatic hydrocarbons (PAHs), anthracene and pyrene, was studied at the B3LYP/6-31G** level of theory. We presumed that H(2) is formed by way of two elementary reactions: the addition of an H atom to a PAH molecular cation, and the H abstraction from the resulting monohydro-PAH cation (i.e., arenium ion) by a second H atom to yield H(2). The first reaction takes place without any activation energy. The second reaction is also predicted to proceed along almost barrierless pathways, although it is far from being a typical ion-molecule reaction. There is a possibility that these reactions might constitute one of the mechanisms for H(2) formation in extremely cold interstellar space. Deuterium enrichment in PAH cations is possibly accompanied by such H(2) formation because deuteration lowers the energies of polyatomic PAH cations appreciably.     

Silylboranes as new sources of silyl radicals for chain-transfer reactions

Various silylboranes, which were outfitted with a catecholborane moiety at one end and a (Me(3)Si)(3)Si moiety at the other end of a carbon chain, were prepared through the hydroboration of the corresponding unsaturated silanes. The C-centered radical species generated from these silylboranes efficiently cyclized to provide, through a 5-exo intramolecular homolytic substitution at the silicon center, the corresponding silacycle and a Me(3)Si radical that was subsequently trapped by sulfonyl acceptors. These cyclizations proceeded at unprecedented rates, due, in part, to a strong gem-dialkyl effect that was attributable to the presence of bulky substituents on a quaternary center located on the chain. In parallel, we designed arylsilylboranes that produced silyl radicals through a 1,5-hydrogen transfer. Such silyl radicals may be valuable radical chain carriers, for instance, in oximation reactions of alkyl halides. Finally, computational studies allowed calculation of activation barriers of the homolytic substitution step and additionally illustrated that the overall reaction mechanism involved a transition state in which the attacking carbon center, the central silicon atom, and the Me(3)Si leaving group were collinear.