Activation volumes of hydrolyses of maltose and maltotriose over an immobilized glucoamylase catalyst

Abstract

Initial rates of hydrolysis of maltose and maltotriose over an immobilized glucoamylase have been measured up to 127 MPa at 25±0.1°C. The observed rates have been analyzed showing the reaction pathways of both hydrolyses to be E+S?ES*?ES7ast;E+P, where E, S, P, ES*, and ES denote the enzyme, the substrate, the product, a substrate-subsite complex, and a substrate-active site complex, respectively. The apparent maximum rate r^mand the apparent Michaelis constant K^m as well as their respective pressure dependences in terms of the apparent activation volume Δ V_app ^# and the apparent volume of reaction Δ V_app have been evaluated. Small absolute values of Δ V_app ^num; and Δ V_app for both reactions have been discussed on the basis of the reaction mechanism.     

Numerical analysis of reversible A B C reaction-diffusion systems

We develop an effective numerical method of studying large-time properties of reversible reaction-diffusion systems of type A + B ↔ C with initially separated reactants. Using it we find that there are three types of asymptotic reaction zones. In particular we show that the reaction rate can be locally negative and concentrations of species A and B can be nonmonotonic functions of the space coordinate x, locally significantly exceeding their initial values. Received 6 June 2002 / Received in final form 20 January 2003 Published online 7 May 2003     

Theoretical study of the photo-isomerisation reactions of 1,2-dihydro-1,2-phosphaborine and 1,2-dihydro-1,2-alumazaine

The mechanisms of the photochemical isomerisation reactions are investigated theoretically using the model systems, 1,2-dihydro-1,2-phosphaborine (5) and 1,2-dihydro-1,2-alumazaine (6), using the CAS(6,6)/6-311G(d,p) and MP2-CAS-(6,6)/6-311++G(3df,3pd)//CAS(6,6)/6-311G(d,p) methods. For each model reactant, three reaction pathways, which lead to three kinds of photo-isomers, are examined. The structures of the conical intersections, which play a key role in such photo-rearrangements, are determined. The thermal (or dark) reactions of the reactant species are also examined, using the same level of theory, to provide a qualitative explanation of the reaction pathways. These model investigations demonstrate that the preferred reaction route for these two aromatic heterocyclics is as follows: reactant → Franck–Condon region → conical intersection → photoproduct. The theoretical evidences anticipate that after irradiation of 5, the photoproduct yield of the Dewar BP-isomer, 8, should be larger than that of the Dewar BP-isomer, 7, whereas no Dewar BP-isomer 9 can be observed. Moreover, the present theoretical data predict after irradiation of 6, all three Dewar AlN-isomers (10, 11, and 12) and the starting molecule, 6, are produced.     

Theoretical study on the reaction of CH3CHCl + NO2

The detailed reaction mechanism of 1-chloroethyl radical with NO₂ is investigated theoretically. The results show that the title reaction is more favourable on the singlet potential energy surface than on the triplet one. For the singlet PES of CH₃CHCl?+?NO₂, it is shown that the CH₃CHCl radical can react with NO₂ to barrierlessly generate adduct a (H₃CHClCNO₂), b₁ (H₃CHClCONO-trans), and b₂ (H₃CHClCONO-cis), respectively. A total of six energetically reaction pathways and ten products are found. However, the most competitive path way is P₁ (CH₃CHO?+?ClNO), which can further dissociate to give P₆ (CH₃CHO?+?Cl?+?NO) and P₂ (CH₃CClO?+?HNO). The present results can lead to a deep understanding of the mechanism of the title reaction and may be helpful for understanding the halogenated ethyl chemistry.     

Theoretical investigation on H abstraction reaction mechanisms and rate constants of Isoflurane with the OH radical

The mechanism of H abstraction reactions for Isoflurane with the OH radical was investigated using density functional theory and G3(MP2) duel theory methods. The geometrical structures of all the species were fully optimised at B3LYP/6-311++G** level of theory. Thermochemistry data were obtained by utilising the high accurate model chemistry method G3(MP2) combined with the standard statistical thermodynamic calculations. Gibbs free energies were used for the reaction channels analysis. All the reaction channels were confirmed throughout the intrinsic reaction coordinate analysis. The results show that two channels were obtained, which correspond to P(1) and P(2) with the respective activation barriers of 63.03 and 54.82 kJ/mol. The rate constants for the two channels over a wide temperature range of 298.15–2000 K were predicted and the calculated data are in agreement with the experimental one. The results show that P(2) is the dominant reaction channel under 800 K and above 800 K, it can be found that P(1) will be more preferable reaction channel.     

T g in Confined Systems: A Free Volume Approach

Abstract

In glass-forming materials confined in films or pores of small dimension, the glass transition temperature T _g is depressed or increased depending on the nature of the interactions at the interface. It is shown that these effects, observed in polymers and simple liquids, can be interpreted in the framework of the free volume model. Similar effects of confinement on the glass and melting transitions are stressed; this permits prediction of the variations of the cooperative molecular motions α with temperature.     

The effect of pressure on the thermal decomposition of nitroalkanes catalyzed by amines

Abstract

Solutions of 1° and 2° nitroalkanes were thermolyzed in the presence of amines at hydrostatic pressures up to 1.5 GPa, and their rates of decomposition were measured. The probable mechanism of base catalyzed decomposition involves a bimolecular reaction of the aci-nitroalkane with the nitronate ion to yield a carbonyl compound, its corresponding oxime, and nitrite ion as the early rate determining steps. In the case of nitroethane, the products react further to give 3,4,5-trimethylisoxazole as a major product above 0.4 GPa. The effects of pressure on the rates of decomposition of nonacidic nitroalkanes, 2,2-dinitropropane and 2-methyl-2-nitropropane, were measured and used to infer the rate-controlling steps. 2,2-Dini-tropropane appears to undergo rearrangement to a nitrite, followed by homolysis to give acetone, NO and NO₂. 2-Methyl-2-nitropropane gives mostly isobutylene and HONO, probably via a 5-membered cyclic transition state.     

A Theoretical Study of the Electronic Spectrum of Photochromic 1,2-Dihydroquinoline

Abstract

Recently, Kolc and Becker¹ reported photochromism of 1,2-dihydro quinoline. The primary act of this reaction appears to be a dissociation of the C – N sigma bond as a result of π→π? excitation which leads to a fully conjugated molecule absorbing in the visible region. This coloured form can be eradicated thermally and the whole process can be repeated. A detailed explanation of this photochromic process obviously requires a good knowledge of the electronic states and structure of the considered molecule. A theoretical study thus appeared quite useful.     

Composition dependence of the lattice constants in LiTaO3

Abstract

The composition range of lithium tantalate was found between 46.5 and 50.0 mole% Li. The congruent melt composition, from which homogeneous single crystals can be grown, was determined at about 48.5 mole% Li₂O. Due to Li₂O evaporation during the reaction of Li₂CO₃ and Ta₂O₅ the starting composition depends on the reaction conditions. The lattice constants change with the composition comparable to LiNbO₃.     

Pulsed EPR measurements on reaction rate constants for addition of photo-generated radicals to double bonds of diethyl fumarate and diethyl maleate

Addition reaction of photo-generated radicals to double bonds of diethyl fumarate (deF) and diethyl maleate (deM), which are geometrical isomers, was studied by means of time-resolved- (TR-) and pulsed-electron paramagnetic resonance (EPR). Analysis of TR-EPR spectra indicates that adduct radicals from deF and deM should have the same structure. The double bonds of these monomers are converted to single ones by addition reaction, which allows hindered internal rotation to give the same structure of adduct radical. The rate constants for addition reaction of photo-generated radicals were determined by Stern–Volmer analysis of the decay time of electron spin-echo intensity of these radicals measured by the pulsed EPR method. Rate constants for deF were found to be larger than those for deM. This relation is in good consistent with efficiency of polymerisation of deF and deM. Experimentally determined rate constants were evaluated by introducing the addition reaction model on the basis of two important factors enthalpy and polar effects.     

Diastereoselectivity and kinetics of hetero diels-alder reactions under high pressure

Abstract

The Hetero Diels-Alder reaction of enamino ketones and ethyl vinyl ether to give dihydropyrans is studied in different solutions under pressure up to 7 kbar. The kinetics is measured via on-line FT IR spectroscopy. The cycloaddition shows a remarkable pressure dependent increase in diastereo-selectivity. For the difference in activation volumes referring to the reaction to the two diastereomers, values up to 5.9 ± 0.5 cm³/mol are observed. The ratio of cis and trans diastereomers can be improved by almost one order of magnitude by changing pressure and temperature from 1 bar and 90 °C to 6 kbar and 0.5 °C.     

Pattern formation in the reaction with anisotropic lateral adsorbate-adsorbate interactions

We present Monte Carlo simulations of the formation of (1×2) islands in the case of the 2 A + B ₂ → 2 AB reaction occurring via the Langmuir-Hinshelwood mechanism on a square lattice under steady-state conditions. The model employed takes into account the effect of anisotropic lateral B-B interactions on the rates of B diffusion and elementary reaction events. The results obtained with qualitatively realistic ratio of the rate of elementary reaction steps indicate that the average island size depends on the details of diffusion and reaction dynamics in a similar way as in the earlier studied case of the simplest A + B reaction running via the Eley-Rideal mechanism. Received 4 January 2002 and Received in final form 2 April 2002 Published online 25 June 2002     

Stereodynamics of the O(3P) with H2 (D2) (v=0, j=0) reaction

Quasi-classical trajectory theory is used to study the reaction of O(³P) with H₂ (D₂) based on the ground ³A' potential energy surface (PES). The reaction cross section of the reaction O+H₂ → OH+H is in excellent agreement with the previous result. Vector correlations, product rotational alignment parameters 〈P₂ (j'·k)〉 and several polarized-dependent differential cross sections are further calculated for the reaction. The product polarization distribution exhibits different characteristics that can be ascribed to different motion paths on the PES, arising from various collision energies or mass factors.     

Enhanced reactivity of domain walls in with sodium

A possible new high temperature superconducting phase was recently reported in WO ₃ :Na. We have examined the reaction between sodium vapour and WO ₃ , and compared the phases formed by the reaction to previously known WO ₃ phases. By using light microscopy and electron microprobe analysis, domain walls from the interior of the crystal are shown to have a much higher Na content than bulk material after reaction with Na vapour. This indicates preferential transport along the domain walls. The result is very similar to a reduction reaction of WO ₃ crystals in which twin walls lose oxygen preferentially. Oxygen deficient twin walls are superconducting with . Received 3 September 1999 and Received in final form 15 December 1999     

Design,synthesis, and in silico studies of novel eugenyloxy propanol azole derivatives having potent antinociceptive activity and evaluation of their β-adrenoceptor blocking property

The design, synthesis, antinociceptive and β-adrenoceptor blocking activities of several eugenyloxy propanol azole derivatives have been described. In this synthesis, the reaction of eugenol with epichlorohydrin provided adducts 3 and 4 which were N-alkylated by diverse azoles to obtain the eugenyloxy propanol azole analogues in good yields. Adducts 3 and 4 were also reacted with azide ion to obtain the corresponding azide 6. The ‘Click’ Huisgen cycloaddition reaction of 6 with diverse alkynes afforded the title compounds in good yields. The synthesized eugenyloxy propanol azole derivatives were in vivo studied for the acute antinociception on male Spargue Dawley rats using tail-flick test. Compounds 5f, 5g, 7b and 11a exhibited potent analgesic properties in comparison with eugenol as a standard drug. In addition, all compounds were ex vivo tested for β-adrenoceptor blocking properties on isolated left atrium of male rats which exhibited partial antagonist or agonist behaviour compared to the standard drugs. The molecular docking study on the binding site of transient receptor potential vanilloid subtype 1 (TRPV1) has indicated that like capsaicin, eugenyloxy propanol azole analogues exhibited the strong affinity to bind at site of TPRV1 in a “tail-up, head-down” conformation and the presence of triazolyl moieties has played undeniable role in durable binding of these ligands to TRPV1. The in silico pharmacokinetic profile, drug likeness and toxicity predictions carried out for all compounds determined that 5g can be considered as potential antinociceptive drug candidate for future research.

     

A simple model for scalar relativistic corrections to molecular total atomisation energies

ABSTRACT

Scalar relativistic corrections to atomisation energies of first- and second-row molecules can be rationalised in terms of a simple additive model, linear in changes in atomic s populations. In a sample of 200 first-and second-row molecules, such a model can account for over 98% of the variance (99% for the first-row subset). The remaining error can be halved again by adding a term involving the change in atomic p populations: those coefficients need not be fitted but can be fixed from atomic electron affinity calculations. This model allows a fairly accurate a priori estimate for the importance of scalar relativistic corrections on a reaction energy, at essentially zero computational cost. While this is not a substitute for explicit calculation of Douglas–Kroll–Hess (DKH) or exact two-component (X2C) relativistic corrections, the model offers an interpretative tool for the chemical analysis of scalar relativistic contributions to reaction energies.     

High pressure effect on the chemoselectivity of catalyzed [2+2] and [2+2+2] addition reactions involving acetylenic esters

Abstract

The chemoselectivity is changed by pressure in the catalyzed addition of propynoates to norbornadiene, but is not altered in the corresponding addition to norbornene.     

Reaction and inelastic processes in the collision O () + O ()

A reduced dimensionality model is used to study the reaction OO O ₃ ( X1A1 ) + O( ³ P ) by means of time-dependent and time-independent quantum-mechanical methods. State-selected probabilities and rate constants are obtained for the reactive process as well as for the inelastic collision in which the vibrationally excited oxygen loses one or more quanta. It is found that the experimentally observed jump in depletion rates above a critical value of v could be partially explained by the vibrational relaxation rather than reaction. Reaction only becomes important for relatively high translational energies and therefore the calculated rates are too small at the temperatures of interest. It is concluded, however, that the reaction saddle point region in the potential energy surface plays a crucial role in the enhancement of vibrational relaxation. Received: 3 February 1998 / Revised: 27 March 1998 / Accepted: 15 May 1998     

Evaluation of Ph and granite/hot water interaction under geothermal conditions

Abstract

The in-situ laboratory measurement of pH in a granite-hot water reaction system has been undertaken under flowing conditions. The calculation of fluid pH and multi-component chemical equilibria in the granite-hot water reaction system was made, using the calculation program SOLVEQ92. In this study, the chemical equilibrium relationship of granite and hot water interaction was also deduced using the some program. The measurement of in-situ pH in the granite-hot water reaction system was undertaken in the temperature and pressure range of 100–250°C and 20MPa respectively. The in-situ pH value shows good agreement with the pH calculation value with regard to multi-component chemical equilibria. As a result of this work, it is reasonable to suggest that the pH of reservoir fluids in geothermal system can be readily estimated by use of the SOLVEQ92 calculation program, which provides a ‘calculated’ pH value.